RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 H2al1mQ9DAD9 105 aa11.81□□□□□ -0.52
Scn1b-201ENSMUST00000098548 Defb1P56386 69 aa11.79□□□□□ -0.52
Scn1b-201ENSMUST00000098548 Sec61bQ9CQS8 96 aaKnown RBP11.79□□□□□ -0.52
Scn1b-201ENSMUST00000098548 Gm17416Q30KP4 66 aa11.77□□□□□ -0.53
Scn1b-201ENSMUST00000098548 Crct1Q6PAI5 102 aa11.71□□□□□ -0.53
Scn1b-201ENSMUST00000098548 Krtap1-3A2A588 173 aa11.68□□□□□ -0.54
Scn1b-201ENSMUST00000098548 Cox6b2Q80ZN9 88 aa11.67□□□□□ -0.54
Scn1b-201ENSMUST00000098548 4933415A04RikQ9D443 101 aa11.62□□□□□ -0.55
Scn1b-201ENSMUST00000098548 Sec61gP60060 68 aa11.58□□□□□ -0.55
Scn1b-201ENSMUST00000098548 ZanO88799 5376 aa11.5□□□□□ -0.57
Scn1b-201ENSMUST00000098548 Gm17606F6ZL36 78 aa11.49□□□□□ -0.57
Scn1b-201ENSMUST00000098548 Krtap16-3Q8C1I6 86 aa11.46□□□□□ -0.57
Scn1b-201ENSMUST00000098548 Gm10318A0A1W2P728 225 aa11.43□□□□□ -0.58
Scn1b-201ENSMUST00000098548 Krtap19-1Q925H2 87 aa11.41□□□□□ -0.58
Scn1b-201ENSMUST00000098548 2210017I01RikA0A0A6YVV1 95 aa11.39□□□□□ -0.59
Scn1b-201ENSMUST00000098548 Krtap19-3Q925H6 87 aa11.39□□□□□ -0.59
Scn1b-201ENSMUST00000098548 LorP18165 486 aa11.37□□□□□ -0.59
Scn1b-201ENSMUST00000098548 Fat4Q2PZL6 4981 aa11.35□□□□□ -0.59
Scn1b-201ENSMUST00000098548 Rnf213E9Q555 5152 aaKnown RBP11.23□□□□□ -0.61
Scn1b-201ENSMUST00000098548 Fam229aB2KGE5 128 aa11.2□□□□□ -0.62
Scn1b-201ENSMUST00000098548 Krtap3-1A2A591 98 aa11.18□□□□□ -0.62
Scn1b-201ENSMUST00000098548 Gm9955Q8CEJ8 102 aa11.17□□□□□ -0.62
Scn1b-201ENSMUST00000098548 Gm19402J3QJV4 266 aa11.15□□□□□ -0.62
Scn1b-201ENSMUST00000098548 Gm3646F6S692 53 aa11.12□□□□□ -0.63
Scn1b-201ENSMUST00000098548 Gm10382Q3V0T5 144 aa11.11□□□□□ -0.63
Scn1b-201ENSMUST00000098548 1700042G07RikB1AUF7 90 aa11.1□□□□□ -0.63
Scn1b-201ENSMUST00000098548 Krtap13-1Q8K198 168 aa11.1□□□□□ -0.63
Scn1b-201ENSMUST00000098548 Ndufs5Q99LY9 106 aa11.09□□□□□ -0.63
Scn1b-201ENSMUST00000098548 Krtap1-4Q3V2D6 188 aa11.01□□□□□ -0.65
Scn1b-201ENSMUST00000098548 Gm20537G3UYK7 97 aa10.97□□□□□ -0.65
Scn1b-201ENSMUST00000098548 BC029722A0A0N4SW31 51 aa10.94□□□□□ -0.66
Scn1b-201ENSMUST00000098548 Krtap1-5A2A590 122 aa10.94□□□□□ -0.66
Scn1b-201ENSMUST00000098548 Gm10061D3Z714 54 aa10.82□□□□□ -0.68
Scn1b-201ENSMUST00000098548 Pla2g10Q9QXX3 151 aa10.82□□□□□ -0.68
Scn1b-201ENSMUST00000098548 SspoQ8CG65 4998 aa10.77□□□□□ -0.68
Scn1b-201ENSMUST00000098548 Gm3880A0A1B0GSB3 72 aa10.62□□□□□ -0.71
Scn1b-201ENSMUST00000098548 Gm17402F6Z0L5 76 aa10.61□□□□□ -0.71
Scn1b-201ENSMUST00000098548 Gm19426M0QWC7 77 aa10.6□□□□□ -0.71
Scn1b-201ENSMUST00000098548 Gm11569B1AQB1 180 aa10.48□□□□□ -0.73
Scn1b-201ENSMUST00000098548 CriptO70333 101 aa10.45□□□□□ -0.74
Scn1b-201ENSMUST00000098548 Gm12216A0A1W2P827 62 aa10.43□□□□□ -0.74
Scn1b-201ENSMUST00000098548 B930094E09RikQ8C4T2 136 aa10.43□□□□□ -0.74
Scn1b-201ENSMUST00000098548 Spink7Q6IE32 76 aa10.35□□□□□ -0.75
Scn1b-201ENSMUST00000098548 Lce1jD3YUU5 139 aa10.31□□□□□ -0.76
Scn1b-201ENSMUST00000098548 Romo1P60603 79 aa10.28□□□□□ -0.76
Scn1b-201ENSMUST00000098548 Krtap17-1A2A5X6 109 aa10.26□□□□□ -0.77
Scn1b-201ENSMUST00000098548 Krtap12-1Q9Z287 130 aa10.22□□□□□ -0.77
Scn1b-201ENSMUST00000098548 Sprr2a3Q4KL71 83 aa10.21□□□□□ -0.78
Scn1b-201ENSMUST00000098548 Sprr2a1Q9CQK8 83 aa10.21□□□□□ -0.78
Scn1b-201ENSMUST00000098548 Krtap9-5A2A5X3 358 aa10.19□□□□□ -0.78
Scn1b-201ENSMUST00000098548 Krtap19-2Q925I0 141 aa10.19□□□□□ -0.78
Scn1b-201ENSMUST00000098548 Gm11562A0PK51 136 aa10.15□□□□□ -0.78
Scn1b-201ENSMUST00000098548 Krtap4-2B1AQ85 167 aa10.01□□□□□ -0.81
Scn1b-201ENSMUST00000098548 Muc5bE9Q5I3 4800 aa10.01□□□□□ -0.81
Scn1b-201ENSMUST00000098548 Krtap19-9aF8WH65 55 aa10□□□□□ -0.81
Scn1b-201ENSMUST00000098548 Prm2P07978 107 aa9.99□□□□□ -0.81
Scn1b-201ENSMUST00000098548 Lce1gQ9D195 139 aa9.92□□□□□ -0.82
Scn1b-201ENSMUST00000098548 Gm21887J3QQ04 176 aa9.84□□□□□ -0.83
Scn1b-201ENSMUST00000098548 Gm11555B1AQ89 175 aa9.73□□□□□ -0.85
Scn1b-201ENSMUST00000098548 Camk2n1Q6QWF9 78 aa9.72□□□□□ -0.85
Scn1b-201ENSMUST00000098548 Gm6358A0A087WPH4 74 aa9.71□□□□□ -0.86
Scn1b-201ENSMUST00000098548 Gm19668J3QMD1 248 aa9.69□□□□□ -0.86
Scn1b-201ENSMUST00000098548 Lce1iQ9D6P5 149 aa9.67□□□□□ -0.86
Scn1b-201ENSMUST00000098548 Krtap4-6Q3V4B7 195 aa9.63□□□□□ -0.87
Scn1b-201ENSMUST00000098548 Gm11596B1AQB0 205 aa9.61□□□□□ -0.87
Scn1b-201ENSMUST00000098548 Syne2Q6ZWQ0 6874 aaKnown RBP9.59□□□□□ -0.87
Scn1b-201ENSMUST00000098548 Mdn1A2ANY6 5589 aaKnown RBP9.58□□□□□ -0.88
Scn1b-201ENSMUST00000098548 Lce1a2Q9D1K4 149 aa9.53□□□□□ -0.88
Scn1b-201ENSMUST00000098548 Gm40193A0A1B0GT39 78 aa9.46□□□□□ -0.89
Scn1b-201ENSMUST00000098548 Krtap4-1Q3UUY3 169 aa9.45□□□□□ -0.9
Scn1b-201ENSMUST00000098548 Mt2P02798 61 aa9.32□□□□□ -0.92
Scn1b-201ENSMUST00000098548 Mp68P56379 58 aa9.25□□□□□ -0.93
Scn1b-201ENSMUST00000098548 Krtap7-1Q9D3I6 87 aa9.24□□□□□ -0.93
Scn1b-201ENSMUST00000098548 Gm11564A2A4L9 201 aa9.2□□□□□ -0.94
Scn1b-201ENSMUST00000098548 Gm11563B1AQ90 168 aa9.2□□□□□ -0.94
Scn1b-201ENSMUST00000098548 Gm11595B1AQA7 289 aa9.2□□□□□ -0.94
Scn1b-201ENSMUST00000098548 Krtap4-8B1AQA8 209 aa9.2□□□□□ -0.94
Scn1b-201ENSMUST00000098548 Krtap8-1O08633 61 aa9.15□□□□□ -0.95
Scn1b-201ENSMUST00000098548 Krtap19-9bQ99NG9 58 aa9.07□□□□□ -0.96
Scn1b-201ENSMUST00000098548 Tnp1P10856 55 aa8.96□□□□□ -0.97
Scn1b-201ENSMUST00000098548 Krtap4-9B1AQA9 244 aa8.95□□□□□ -0.98
Scn1b-201ENSMUST00000098548 Mt4P47945 62 aa8.86□□□□□ -0.99
Scn1b-201ENSMUST00000098548 Krtap22-2J3QNX6 67 aa8.82□□□□□ -1
Scn1b-201ENSMUST00000098548 Krtap9-3Q3V2C1 136 aa8.82□□□□□ -1
Scn1b-201ENSMUST00000098548 Fsip2A2ARZ3 6995 aa8.65□□□□□ -1.02
Scn1b-201ENSMUST00000098548 Krtap4-13Q9D7P3 165 aa8.62□□□□□ -1.03
Scn1b-201ENSMUST00000098548 Lce1bQ9D149 137 aa8.59□□□□□ -1.03
Scn1b-201ENSMUST00000098548 Gm20538F6Z9R1 75 aa8.5□□□□□ -1.05
Scn1b-201ENSMUST00000098548 Gm38119A0A0A6YX29 146 aa8.49□□□□□ -1.05
Scn1b-201ENSMUST00000098548 2310046K23RikA0A0A6YVW6 87 aa8.42□□□□□ -1.06
Scn1b-201ENSMUST00000098548 Sprr2kO70562 68 aa8.41□□□□□ -1.06
Scn1b-201ENSMUST00000098548 2300003K06RikA2A4M0 262 aa8.37□□□□□ -1.07
Scn1b-201ENSMUST00000098548 Krtap6-3A0A087WQL6 57 aa8.35□□□□□ -1.07
Scn1b-201ENSMUST00000098548 Lce1hQ9D6R3 140 aa8.23□□□□□ -1.09
Scn1b-201ENSMUST00000098548 Krtap4-7Q9D732 168 aa8.2□□□□□ -1.1
Scn1b-201ENSMUST00000098548 Lce1lQ9D1G7 135 aa8.18□□□□□ -1.1
Scn1b-201ENSMUST00000098548 Ndufaf8A2AMZ4 74 aa8.13□□□□□ -1.11
Scn1b-201ENSMUST00000098548 Lce1dQ9D731 133 aa7.84□□□□□ -1.15
Scn1b-201ENSMUST00000098548 Gm10272F7CZ33 110 aa7.83□□□□□ -1.16
Scn1b-201ENSMUST00000098548 Sprr2gO70558 76 aa7.8□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms