RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 H2al1mQ9DAD9 105 aa11,81□□□□□ -0,52
Scn1b-201ENSMUST00000098548 Defb1P56386 69 aa11,79□□□□□ -0,52
Scn1b-201ENSMUST00000098548 Sec61bQ9CQS8 96 aaKnown RBP11,79□□□□□ -0,52
Scn1b-201ENSMUST00000098548 Gm17416Q30KP4 66 aa11,77□□□□□ -0,53
Scn1b-201ENSMUST00000098548 Crct1Q6PAI5 102 aa11,71□□□□□ -0,53
Scn1b-201ENSMUST00000098548 Krtap1-3A2A588 173 aa11,68□□□□□ -0,54
Scn1b-201ENSMUST00000098548 Cox6b2Q80ZN9 88 aa11,67□□□□□ -0,54
Scn1b-201ENSMUST00000098548 4933415A04RikQ9D443 101 aa11,62□□□□□ -0,55
Scn1b-201ENSMUST00000098548 Sec61gP60060 68 aa11,58□□□□□ -0,55
Scn1b-201ENSMUST00000098548 ZanO88799 5376 aa11,5□□□□□ -0,57
Scn1b-201ENSMUST00000098548 Gm17606F6ZL36 78 aa11,49□□□□□ -0,57
Scn1b-201ENSMUST00000098548 Krtap16-3Q8C1I6 86 aa11,46□□□□□ -0,57
Scn1b-201ENSMUST00000098548 Gm10318A0A1W2P728 225 aa11,43□□□□□ -0,58
Scn1b-201ENSMUST00000098548 Krtap19-1Q925H2 87 aa11,41□□□□□ -0,58
Scn1b-201ENSMUST00000098548 2210017I01RikA0A0A6YVV1 95 aa11,39□□□□□ -0,59
Scn1b-201ENSMUST00000098548 Krtap19-3Q925H6 87 aa11,39□□□□□ -0,59
Scn1b-201ENSMUST00000098548 LorP18165 486 aa11,37□□□□□ -0,59
Scn1b-201ENSMUST00000098548 Fat4Q2PZL6 4981 aa11,35□□□□□ -0,59
Scn1b-201ENSMUST00000098548 Rnf213E9Q555 5152 aaKnown RBP11,23□□□□□ -0,61
Scn1b-201ENSMUST00000098548 Fam229aB2KGE5 128 aa11,2□□□□□ -0,62
Scn1b-201ENSMUST00000098548 Krtap3-1A2A591 98 aa11,18□□□□□ -0,62
Scn1b-201ENSMUST00000098548 Gm9955Q8CEJ8 102 aa11,17□□□□□ -0,62
Scn1b-201ENSMUST00000098548 Gm19402J3QJV4 266 aa11,15□□□□□ -0,62
Scn1b-201ENSMUST00000098548 Gm3646F6S692 53 aa11,12□□□□□ -0,63
Scn1b-201ENSMUST00000098548 Gm10382Q3V0T5 144 aa11,11□□□□□ -0,63
Scn1b-201ENSMUST00000098548 1700042G07RikB1AUF7 90 aa11,1□□□□□ -0,63
Scn1b-201ENSMUST00000098548 Krtap13-1Q8K198 168 aa11,1□□□□□ -0,63
Scn1b-201ENSMUST00000098548 Ndufs5Q99LY9 106 aa11,09□□□□□ -0,63
Scn1b-201ENSMUST00000098548 Krtap1-4Q3V2D6 188 aa11,01□□□□□ -0,65
Scn1b-201ENSMUST00000098548 Gm20537G3UYK7 97 aa10,97□□□□□ -0,65
Scn1b-201ENSMUST00000098548 BC029722A0A0N4SW31 51 aa10,94□□□□□ -0,66
Scn1b-201ENSMUST00000098548 Krtap1-5A2A590 122 aa10,94□□□□□ -0,66
Scn1b-201ENSMUST00000098548 Gm10061D3Z714 54 aa10,82□□□□□ -0,68
Scn1b-201ENSMUST00000098548 Pla2g10Q9QXX3 151 aa10,82□□□□□ -0,68
Scn1b-201ENSMUST00000098548 SspoQ8CG65 4998 aa10,77□□□□□ -0,68
Scn1b-201ENSMUST00000098548 Gm3880A0A1B0GSB3 72 aa10,62□□□□□ -0,71
Scn1b-201ENSMUST00000098548 Gm17402F6Z0L5 76 aa10,61□□□□□ -0,71
Scn1b-201ENSMUST00000098548 Gm19426M0QWC7 77 aa10,6□□□□□ -0,71
Scn1b-201ENSMUST00000098548 Gm11569B1AQB1 180 aa10,48□□□□□ -0,73
Scn1b-201ENSMUST00000098548 CriptO70333 101 aa10,45□□□□□ -0,74
Scn1b-201ENSMUST00000098548 Gm12216A0A1W2P827 62 aa10,43□□□□□ -0,74
Scn1b-201ENSMUST00000098548 B930094E09RikQ8C4T2 136 aa10,43□□□□□ -0,74
Scn1b-201ENSMUST00000098548 Spink7Q6IE32 76 aa10,35□□□□□ -0,75
Scn1b-201ENSMUST00000098548 Lce1jD3YUU5 139 aa10,31□□□□□ -0,76
Scn1b-201ENSMUST00000098548 Romo1P60603 79 aa10,28□□□□□ -0,76
Scn1b-201ENSMUST00000098548 Krtap17-1A2A5X6 109 aa10,26□□□□□ -0,77
Scn1b-201ENSMUST00000098548 Krtap12-1Q9Z287 130 aa10,22□□□□□ -0,77
Scn1b-201ENSMUST00000098548 Sprr2a3Q4KL71 83 aa10,21□□□□□ -0,78
Scn1b-201ENSMUST00000098548 Sprr2a1Q9CQK8 83 aa10,21□□□□□ -0,78
Scn1b-201ENSMUST00000098548 Krtap9-5A2A5X3 358 aa10,19□□□□□ -0,78
Scn1b-201ENSMUST00000098548 Krtap19-2Q925I0 141 aa10,19□□□□□ -0,78
Scn1b-201ENSMUST00000098548 Gm11562A0PK51 136 aa10,15□□□□□ -0,78
Scn1b-201ENSMUST00000098548 Krtap4-2B1AQ85 167 aa10,01□□□□□ -0,81
Scn1b-201ENSMUST00000098548 Muc5bE9Q5I3 4800 aa10,01□□□□□ -0,81
Scn1b-201ENSMUST00000098548 Krtap19-9aF8WH65 55 aa10□□□□□ -0,81
Scn1b-201ENSMUST00000098548 Prm2P07978 107 aa9,99□□□□□ -0,81
Scn1b-201ENSMUST00000098548 Lce1gQ9D195 139 aa9,92□□□□□ -0,82
Scn1b-201ENSMUST00000098548 Gm21887J3QQ04 176 aa9,84□□□□□ -0,83
Scn1b-201ENSMUST00000098548 Gm11555B1AQ89 175 aa9,73□□□□□ -0,85
Scn1b-201ENSMUST00000098548 Camk2n1Q6QWF9 78 aa9,72□□□□□ -0,85
Scn1b-201ENSMUST00000098548 Gm6358A0A087WPH4 74 aa9,71□□□□□ -0,86
Scn1b-201ENSMUST00000098548 Gm19668J3QMD1 248 aa9,69□□□□□ -0,86
Scn1b-201ENSMUST00000098548 Lce1iQ9D6P5 149 aa9,67□□□□□ -0,86
Scn1b-201ENSMUST00000098548 Krtap4-6Q3V4B7 195 aa9,63□□□□□ -0,87
Scn1b-201ENSMUST00000098548 Gm11596B1AQB0 205 aa9,61□□□□□ -0,87
Scn1b-201ENSMUST00000098548 Syne2Q6ZWQ0 6874 aaKnown RBP9,59□□□□□ -0,87
Scn1b-201ENSMUST00000098548 Mdn1A2ANY6 5589 aaKnown RBP9,58□□□□□ -0,88
Scn1b-201ENSMUST00000098548 Lce1a2Q9D1K4 149 aa9,53□□□□□ -0,88
Scn1b-201ENSMUST00000098548 Gm40193A0A1B0GT39 78 aa9,46□□□□□ -0,89
Scn1b-201ENSMUST00000098548 Krtap4-1Q3UUY3 169 aa9,45□□□□□ -0,9
Scn1b-201ENSMUST00000098548 Mt2P02798 61 aa9,32□□□□□ -0,92
Scn1b-201ENSMUST00000098548 Mp68P56379 58 aa9,25□□□□□ -0,93
Scn1b-201ENSMUST00000098548 Krtap7-1Q9D3I6 87 aa9,24□□□□□ -0,93
Scn1b-201ENSMUST00000098548 Gm11564A2A4L9 201 aa9,2□□□□□ -0,94
Scn1b-201ENSMUST00000098548 Gm11563B1AQ90 168 aa9,2□□□□□ -0,94
Scn1b-201ENSMUST00000098548 Gm11595B1AQA7 289 aa9,2□□□□□ -0,94
Scn1b-201ENSMUST00000098548 Krtap4-8B1AQA8 209 aa9,2□□□□□ -0,94
Scn1b-201ENSMUST00000098548 Krtap8-1O08633 61 aa9,15□□□□□ -0,95
Scn1b-201ENSMUST00000098548 Krtap19-9bQ99NG9 58 aa9,07□□□□□ -0,96
Scn1b-201ENSMUST00000098548 Tnp1P10856 55 aa8,96□□□□□ -0,97
Scn1b-201ENSMUST00000098548 Krtap4-9B1AQA9 244 aa8,95□□□□□ -0,98
Scn1b-201ENSMUST00000098548 Mt4P47945 62 aa8,86□□□□□ -0,99
Scn1b-201ENSMUST00000098548 Krtap22-2J3QNX6 67 aa8,82□□□□□ -1
Scn1b-201ENSMUST00000098548 Krtap9-3Q3V2C1 136 aa8,82□□□□□ -1
Scn1b-201ENSMUST00000098548 Fsip2A2ARZ3 6995 aa8,65□□□□□ -1,02
Scn1b-201ENSMUST00000098548 Krtap4-13Q9D7P3 165 aa8,62□□□□□ -1,03
Scn1b-201ENSMUST00000098548 Lce1bQ9D149 137 aa8,59□□□□□ -1,03
Scn1b-201ENSMUST00000098548 Gm20538F6Z9R1 75 aa8,5□□□□□ -1,05
Scn1b-201ENSMUST00000098548 Gm38119A0A0A6YX29 146 aa8,49□□□□□ -1,05
Scn1b-201ENSMUST00000098548 2310046K23RikA0A0A6YVW6 87 aa8,42□□□□□ -1,06
Scn1b-201ENSMUST00000098548 Sprr2kO70562 68 aa8,41□□□□□ -1,06
Scn1b-201ENSMUST00000098548 2300003K06RikA2A4M0 262 aa8,37□□□□□ -1,07
Scn1b-201ENSMUST00000098548 Krtap6-3A0A087WQL6 57 aa8,35□□□□□ -1,07
Scn1b-201ENSMUST00000098548 Lce1hQ9D6R3 140 aa8,23□□□□□ -1,09
Scn1b-201ENSMUST00000098548 Krtap4-7Q9D732 168 aa8,2□□□□□ -1,1
Scn1b-201ENSMUST00000098548 Lce1lQ9D1G7 135 aa8,18□□□□□ -1,1
Scn1b-201ENSMUST00000098548 Ndufaf8A2AMZ4 74 aa8,13□□□□□ -1,11
Scn1b-201ENSMUST00000098548 Lce1dQ9D731 133 aa7,84□□□□□ -1,15
Scn1b-201ENSMUST00000098548 Gm10272F7CZ33 110 aa7,83□□□□□ -1,16
Scn1b-201ENSMUST00000098548 Sprr2gO70558 76 aa7,8□□□□□ -1,16
Retrieved 100 of 22,080 RNA–protein pairs in 49,1 ms