RNA–Protein interactions for RNA: ENSMUST00000065330.7

Clk3-201, Transcript of Dual specificity protein kinase CLK3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk3, Length 2,496 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3-201ENSMUST00000065330 Mp68P56379 58 aa9.54□□□□□ -0.88
Clk3-201ENSMUST00000065330 Romo1P60603 79 aa9.53□□□□□ -0.88
Clk3-201ENSMUST00000065330 CriptO70333 101 aa9.45□□□□□ -0.9
Clk3-201ENSMUST00000065330 Kiaa1109A2AAE1 5005 aa9.44□□□□□ -0.9
Clk3-201ENSMUST00000065330 Herc2Q4U2R1 4836 aa9.43□□□□□ -0.9
Clk3-201ENSMUST00000065330 2210017I01RikA0A0A6YVV1 95 aa9.41□□□□□ -0.9
Clk3-201ENSMUST00000065330 HydinQ80W93 5154 aa9.4□□□□□ -0.9
Clk3-201ENSMUST00000065330 Dnhd1D3Z2X2 4750 aa9.32□□□□□ -0.92
Clk3-201ENSMUST00000065330 Lrp2A2ARV4 4660 aa9.28□□□□□ -0.92
Clk3-201ENSMUST00000065330 Birc6O88738 4882 aa9.23□□□□□ -0.93
Clk3-201ENSMUST00000065330 2310057N15RikQ9D6T8 200 aa9.22□□□□□ -0.93
Clk3-201ENSMUST00000065330 Krtap13-1Q8K198 168 aa9.21□□□□□ -0.94
Clk3-201ENSMUST00000065330 BC029722A0A0N4SW31 51 aa9.12□□□□□ -0.95
Clk3-201ENSMUST00000065330 Gm21887J3QQ04 176 aa9.11□□□□□ -0.95
Clk3-201ENSMUST00000065330 B930094E09RikQ8C4T2 136 aa9.08□□□□□ -0.96
Clk3-201ENSMUST00000065330 Gm19426M0QWC7 77 aa9.05□□□□□ -0.96
Clk3-201ENSMUST00000065330 PcloQ9QYX7 5068 aa9.04□□□□□ -0.96
Clk3-201ENSMUST00000065330 Sec61bQ9CQS8 96 aaKnown RBP9.01□□□□□ -0.97
Clk3-201ENSMUST00000065330 Krtap1-5A2A590 122 aa8.94□□□□□ -0.98
Clk3-201ENSMUST00000065330 Gm10318A0A1W2P728 225 aa8.87□□□□□ -0.99
Clk3-201ENSMUST00000065330 Prm2P07978 107 aa8.84□□□□□ -0.99
Clk3-201ENSMUST00000065330 Crct1Q6PAI5 102 aa8.83□□□□□ -1
Clk3-201ENSMUST00000065330 Gm19402J3QJV4 266 aa8.82□□□□□ -1
Clk3-201ENSMUST00000065330 Gm17402F6Z0L5 76 aa8.81□□□□□ -1
Clk3-201ENSMUST00000065330 Krtap16-3Q8C1I6 86 aa8.8□□□□□ -1
Clk3-201ENSMUST00000065330 Ndufaf8A2AMZ4 74 aa8.77□□□□□ -1.01
Clk3-201ENSMUST00000065330 Fam229aB2KGE5 128 aa8.75□□□□□ -1.01
Clk3-201ENSMUST00000065330 Spink7Q6IE32 76 aa8.69□□□□□ -1.02
Clk3-201ENSMUST00000065330 Herc1E9PZP8 4859 aa8.67□□□□□ -1.02
Clk3-201ENSMUST00000065330 Sprr2a3Q4KL71 83 aa8.65□□□□□ -1.02
Clk3-201ENSMUST00000065330 Krtap19-1Q925H2 87 aa8.65□□□□□ -1.02
Clk3-201ENSMUST00000065330 Sprr2a1Q9CQK8 83 aa8.65□□□□□ -1.02
Clk3-201ENSMUST00000065330 Krtap7-1Q9D3I6 87 aa8.62□□□□□ -1.03
Clk3-201ENSMUST00000065330 Krtap19-3Q925H6 87 aa8.59□□□□□ -1.03
Clk3-201ENSMUST00000065330 ZanO88799 5376 aa8.44□□□□□ -1.06
Clk3-201ENSMUST00000065330 Krtap1-4Q3V2D6 188 aa8.41□□□□□ -1.06
Clk3-201ENSMUST00000065330 4932415D10RikA0A1W2P6U8 4986 aa8.39□□□□□ -1.07
Clk3-201ENSMUST00000065330 Ubr4A2AN08 5180 aa8.38□□□□□ -1.07
Clk3-201ENSMUST00000065330 Gm40193A0A1B0GT39 78 aa8.35□□□□□ -1.07
Clk3-201ENSMUST00000065330 Gm19668J3QMD1 248 aa8.3□□□□□ -1.08
Clk3-201ENSMUST00000065330 Fat4Q2PZL6 4981 aa8.3□□□□□ -1.08
Clk3-201ENSMUST00000065330 Ush2AQ2QI47 5193 aa8.29□□□□□ -1.08
Clk3-201ENSMUST00000065330 Hmcn2A2AJ76 5100 aa8.28□□□□□ -1.08
Clk3-201ENSMUST00000065330 Camk2n1Q6QWF9 78 aa8.27□□□□□ -1.09
Clk3-201ENSMUST00000065330 Lce1mQ9CR91 182 aa8.25□□□□□ -1.09
Clk3-201ENSMUST00000065330 Krtap1-3A2A588 173 aa8.21□□□□□ -1.1
Clk3-201ENSMUST00000065330 Lce1jD3YUU5 139 aa8.16□□□□□ -1.1
Clk3-201ENSMUST00000065330 Gm9112A2AI92 75 aa8.1□□□□□ -1.11
Clk3-201ENSMUST00000065330 LorP18165 486 aa8.07□□□□□ -1.12
Clk3-201ENSMUST00000065330 Krtap12-1Q9Z287 130 aa8.03□□□□□ -1.12
Clk3-201ENSMUST00000065330 Krtap19-9aF8WH65 55 aa7.98□□□□□ -1.13
Clk3-201ENSMUST00000065330 Rnf213E9Q555 5152 aaKnown RBP7.93□□□□□ -1.14
Clk3-201ENSMUST00000065330 Gm9789Q8BIG3 52 aa7.89□□□□□ -1.15
Clk3-201ENSMUST00000065330 Gm18596A0A1W2P860 280 aa7.87□□□□□ -1.15
Clk3-201ENSMUST00000065330 Krtap17-1A2A5X6 109 aa7.83□□□□□ -1.16
Clk3-201ENSMUST00000065330 Tnp1P10856 55 aa7.74□□□□□ -1.17
Clk3-201ENSMUST00000065330 Prm1P02319 51 aa7.69□□□□□ -1.18
Clk3-201ENSMUST00000065330 Gm7735D3YX18 52 aa7.68□□□□□ -1.18
Clk3-201ENSMUST00000065330 Lce1iQ9D6P5 149 aa7.64□□□□□ -1.19
Clk3-201ENSMUST00000065330 Krtap8-1O08633 61 aa7.61□□□□□ -1.19
Clk3-201ENSMUST00000065330 Krtap19-2Q925I0 141 aa7.59□□□□□ -1.19
Clk3-201ENSMUST00000065330 Lce1a2Q9D1K4 149 aa7.59□□□□□ -1.19
Clk3-201ENSMUST00000065330 SspoQ8CG65 4998 aa7.57□□□□□ -1.2
Clk3-201ENSMUST00000065330 Krtap9-5A2A5X3 358 aa7.55□□□□□ -1.2
Clk3-201ENSMUST00000065330 Krtap19-9bQ99NG9 58 aa7.5□□□□□ -1.21
Clk3-201ENSMUST00000065330 Krtap9-3Q3V2C1 136 aa7.35□□□□□ -1.23
Clk3-201ENSMUST00000065330 2310046K23RikA0A0A6YVW6 87 aa7.33□□□□□ -1.24
Clk3-201ENSMUST00000065330 Lce1hQ9D6R3 140 aa7.24□□□□□ -1.25
Clk3-201ENSMUST00000065330 Gm10061D3Z714 54 aa7.17□□□□□ -1.26
Clk3-201ENSMUST00000065330 Gm6358A0A087WPH4 74 aa7.12□□□□□ -1.27
Clk3-201ENSMUST00000065330 Mt2P02798 61 aa7.11□□□□□ -1.27
Clk3-201ENSMUST00000065330 Muc5bE9Q5I3 4800 aa7.11□□□□□ -1.27
Clk3-201ENSMUST00000065330 Lce1dQ9D731 133 aa6.77□□□□□ -1.32
Clk3-201ENSMUST00000065330 Gm11569B1AQB1 180 aa6.67□□□□□ -1.34
Clk3-201ENSMUST00000065330 Krtap22-2J3QNX6 67 aa6.66□□□□□ -1.34
Clk3-201ENSMUST00000065330 Mdn1A2ANY6 5589 aaKnown RBP6.64□□□□□ -1.35
Clk3-201ENSMUST00000065330 Gm10272F7CZ33 110 aa6.59□□□□□ -1.35
Clk3-201ENSMUST00000065330 Sprr2gO70558 76 aa6.58□□□□□ -1.36
Clk3-201ENSMUST00000065330 Lce1eQ9D139 143 aa6.55□□□□□ -1.36
Clk3-201ENSMUST00000065330 Gm11938Q9D3H4 131 aa6.47□□□□□ -1.37
Clk3-201ENSMUST00000065330 Sprr2dO70555 85 aa6.44□□□□□ -1.38
Clk3-201ENSMUST00000065330 4933428G20RikQ9D3X4 101 aa6.41□□□□□ -1.38
Clk3-201ENSMUST00000065330 Gm11562A0PK51 136 aa6.28□□□□□ -1.4
Clk3-201ENSMUST00000065330 Lce1cQ9D1C5 147 aa6.28□□□□□ -1.4
Clk3-201ENSMUST00000065330 Syne1Q6ZWR6 8799 aa6.1□□□□□ -1.43
Clk3-201ENSMUST00000065330 Krtap4-6Q3V4B7 195 aa6.09□□□□□ -1.43
Clk3-201ENSMUST00000065330 Lce3bQ9CQM7 98 aa6.05□□□□□ -1.44
Clk3-201ENSMUST00000065330 Krtap19-4Q925H7 84 aa6.04□□□□□ -1.44
Clk3-201ENSMUST00000065330 Lce1fB9EJP6 147 aa6.04□□□□□ -1.44
Clk3-201ENSMUST00000065330 Lce1a1Q9CQH5 143 aa6.04□□□□□ -1.44
Clk3-201ENSMUST00000065330 Gm10100J3QK64 120 aa6.03□□□□□ -1.44
Clk3-201ENSMUST00000065330 Krtap4-1Q3UUY3 169 aa5.93□□□□□ -1.46
Clk3-201ENSMUST00000065330 Gm11555B1AQ89 175 aa5.91□□□□□ -1.46
Clk3-201ENSMUST00000065330 Gm10142J3KMP7 120 aa5.89□□□□□ -1.47
Clk3-201ENSMUST00000065330 Lce1gQ9D195 139 aa5.8□□□□□ -1.48
Clk3-201ENSMUST00000065330 Fsip2A2ARZ3 6995 aa5.8□□□□□ -1.48
Clk3-201ENSMUST00000065330 Lce3cQ91V05 98 aa5.77□□□□□ -1.49
Clk3-201ENSMUST00000065330 Gm38119A0A0A6YX29 146 aa5.76□□□□□ -1.49
Clk3-201ENSMUST00000065330 Mt4P47945 62 aa5.75□□□□□ -1.49
Clk3-201ENSMUST00000065330 Krtap4-2B1AQ85 167 aa5.74□□□□□ -1.49
Retrieved 100 of 22,080 RNA–protein pairs in 8.5 ms