RNA–Protein interactions for RNA: ENSMUST00000063116.9

Msx1-201, Transcript of Homeobox protein MSX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msx1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1-201ENSMUST00000063116 1700042G07RikB1AUF7 90 aa9.86□□□□□ -0.83
Msx1-201ENSMUST00000063116 2210017I01RikA0A0A6YVV1 95 aa9.79□□□□□ -0.84
Msx1-201ENSMUST00000063116 Gm17606F6ZL36 78 aa9.78□□□□□ -0.84
Msx1-201ENSMUST00000063116 Gm18596A0A1W2P860 280 aa9.75□□□□□ -0.85
Msx1-201ENSMUST00000063116 Krtap3-1A2A591 98 aa9.75□□□□□ -0.85
Msx1-201ENSMUST00000063116 Ush2AQ2QI47 5193 aa9.74□□□□□ -0.85
Msx1-201ENSMUST00000063116 Ndufs5Q99LY9 106 aa9.74□□□□□ -0.85
Msx1-201ENSMUST00000063116 Krtap13-1Q8K198 168 aa9.71□□□□□ -0.86
Msx1-201ENSMUST00000063116 Krtap16-3Q8C1I6 86 aa9.7□□□□□ -0.86
Msx1-201ENSMUST00000063116 Gm10382Q3V0T5 144 aa9.67□□□□□ -0.86
Msx1-201ENSMUST00000063116 Crct1Q6PAI5 102 aa9.67□□□□□ -0.86
Msx1-201ENSMUST00000063116 Hmcn2A2AJ76 5100 aa9.65□□□□□ -0.86
Msx1-201ENSMUST00000063116 Krtap19-1Q925H2 87 aa9.62□□□□□ -0.87
Msx1-201ENSMUST00000063116 Gm9789Q8BIG3 52 aa9.6□□□□□ -0.87
Msx1-201ENSMUST00000063116 Gm9955Q8CEJ8 102 aa9.59□□□□□ -0.87
Msx1-201ENSMUST00000063116 Krtap19-3Q925H6 87 aa9.57□□□□□ -0.88
Msx1-201ENSMUST00000063116 Gm20537G3UYK7 97 aa9.56□□□□□ -0.88
Msx1-201ENSMUST00000063116 Gm10318A0A1W2P728 225 aa9.55□□□□□ -0.88
Msx1-201ENSMUST00000063116 Krtap1-5A2A590 122 aa9.54□□□□□ -0.88
Msx1-201ENSMUST00000063116 Prm1P02319 51 aa9.53□□□□□ -0.88
Msx1-201ENSMUST00000063116 Krtap1-3A2A588 173 aa9.5□□□□□ -0.89
Msx1-201ENSMUST00000063116 Ubr4A2AN08 5180 aa9.5□□□□□ -0.89
Msx1-201ENSMUST00000063116 Gm7735D3YX18 52 aa9.49□□□□□ -0.89
Msx1-201ENSMUST00000063116 Fam229aB2KGE5 128 aa9.48□□□□□ -0.89
Msx1-201ENSMUST00000063116 A0A1Y7VJH8 109 aa9.45□□□□□ -0.9
Msx1-201ENSMUST00000063116 Pla2g10Q9QXX3 151 aa9.42□□□□□ -0.9
Msx1-201ENSMUST00000063116 4932415D10RikA0A1W2P6U8 4986 aa9.41□□□□□ -0.9
Msx1-201ENSMUST00000063116 ZanO88799 5376 aa9.36□□□□□ -0.91
Msx1-201ENSMUST00000063116 Gm3880A0A1B0GSB3 72 aa9.35□□□□□ -0.91
Msx1-201ENSMUST00000063116 Gm19402J3QJV4 266 aa9.34□□□□□ -0.91
Msx1-201ENSMUST00000063116 BC029722A0A0N4SW31 51 aa9.31□□□□□ -0.92
Msx1-201ENSMUST00000063116 LorP18165 486 aa9.21□□□□□ -0.93
Msx1-201ENSMUST00000063116 Krtap1-4Q3V2D6 188 aa9.14□□□□□ -0.95
Msx1-201ENSMUST00000063116 Fat4Q2PZL6 4981 aa9.13□□□□□ -0.95
Msx1-201ENSMUST00000063116 Rnf213E9Q555 5152 aaKnown RBP9.09□□□□□ -0.95
Msx1-201ENSMUST00000063116 Gm19426M0QWC7 77 aa9.06□□□□□ -0.96
Msx1-201ENSMUST00000063116 B930094E09RikQ8C4T2 136 aa9.01□□□□□ -0.97
Msx1-201ENSMUST00000063116 Gm12216A0A1W2P827 62 aa9□□□□□ -0.97
Msx1-201ENSMUST00000063116 Gm17402F6Z0L5 76 aa8.99□□□□□ -0.97
Msx1-201ENSMUST00000063116 Krtap28-10A0A1Y7VP58 119 aa8.95□□□□□ -0.98
Msx1-201ENSMUST00000063116 Romo1P60603 79 aa8.94□□□□□ -0.98
Msx1-201ENSMUST00000063116 A0A1Y7VLE6 161 aa8.93□□□□□ -0.98
Msx1-201ENSMUST00000063116 Gm7544A0A1Y7VJ58 118 aa8.89□□□□□ -0.99
Msx1-201ENSMUST00000063116 Spink7Q6IE32 76 aa8.84□□□□□ -1
Msx1-201ENSMUST00000063116 Lce1jD3YUU5 139 aa8.82□□□□□ -1
Msx1-201ENSMUST00000063116 Krtap4-1Q3UUY3 169 aa8.81□□□□□ -1
Msx1-201ENSMUST00000063116 Sprr2a3Q4KL71 83 aa8.8□□□□□ -1
Msx1-201ENSMUST00000063116 Sprr2a1Q9CQK8 83 aa8.8□□□□□ -1
Msx1-201ENSMUST00000063116 SspoQ8CG65 4998 aa8.77□□□□□ -1
Msx1-201ENSMUST00000063116 CriptO70333 101 aa8.76□□□□□ -1.01
Msx1-201ENSMUST00000063116 Krtap12-1Q9Z287 130 aa8.73□□□□□ -1.01
Msx1-201ENSMUST00000063116 Gm21887J3QQ04 176 aa8.7□□□□□ -1.02
Msx1-201ENSMUST00000063116 Krtap17-1A2A5X6 109 aa8.61□□□□□ -1.03
Msx1-201ENSMUST00000063116 Krtap19-9aF8WH65 55 aa8.6□□□□□ -1.03
Msx1-201ENSMUST00000063116 Gm10061D3Z714 54 aa8.57□□□□□ -1.04
Msx1-201ENSMUST00000063116 A030005L19RikA0A1Y7VIU2 113 aa8.55□□□□□ -1.04
Msx1-201ENSMUST00000063116 Mp68P56379 58 aa8.51□□□□□ -1.05
Msx1-201ENSMUST00000063116 Gm20538F6Z9R1 75 aa8.5□□□□□ -1.05
Msx1-201ENSMUST00000063116 Krtap19-2Q925I0 141 aa8.5□□□□□ -1.05
Msx1-201ENSMUST00000063116 Krtap28-13A0A087WQP5 138 aa8.5□□□□□ -1.05
Msx1-201ENSMUST00000063116 Prm2P07978 107 aa8.49□□□□□ -1.05
Msx1-201ENSMUST00000063116 Krtap9-5A2A5X3 358 aa8.45□□□□□ -1.06
Msx1-201ENSMUST00000063116 Gm11555B1AQ89 175 aa8.37□□□□□ -1.07
Msx1-201ENSMUST00000063116 Camk2n1Q6QWF9 78 aa8.31□□□□□ -1.08
Msx1-201ENSMUST00000063116 A030005K14RikA0A1Y7VNY1 122 aa8.3□□□□□ -1.08
Msx1-201ENSMUST00000063116 Gm19668J3QMD1 248 aa8.3□□□□□ -1.08
Msx1-201ENSMUST00000063116 Lce1iQ9D6P5 149 aa8.29□□□□□ -1.08
Msx1-201ENSMUST00000063116 Lce1a2Q9D1K4 149 aa8.19□□□□□ -1.1
Msx1-201ENSMUST00000063116 Muc5bE9Q5I3 4800 aa8.17□□□□□ -1.1
Msx1-201ENSMUST00000063116 Krtap7-1Q9D3I6 87 aa8.16□□□□□ -1.1
Msx1-201ENSMUST00000063116 Gm11563B1AQ90 168 aa8.14□□□□□ -1.11
Msx1-201ENSMUST00000063116 Gm11569B1AQB1 180 aa8.14□□□□□ -1.11
Msx1-201ENSMUST00000063116 Krtap4-7Q9D732 168 aa8.14□□□□□ -1.11
Msx1-201ENSMUST00000063116 Gm40193A0A1B0GT39 78 aa8.1□□□□□ -1.11
Msx1-201ENSMUST00000063116 Gm6358A0A087WPH4 74 aa8.04□□□□□ -1.12
Msx1-201ENSMUST00000063116 A0A286YCP9 139 aa7.99□□□□□ -1.13
Msx1-201ENSMUST00000063116 Krtap8-1O08633 61 aa7.88□□□□□ -1.15
Msx1-201ENSMUST00000063116 Mt2P02798 61 aa7.84□□□□□ -1.15
Msx1-201ENSMUST00000063116 Ndufaf8A2AMZ4 74 aa7.82□□□□□ -1.16
Msx1-201ENSMUST00000063116 Krtap19-9bQ99NG9 58 aa7.8□□□□□ -1.16
Msx1-201ENSMUST00000063116 A030003K21RikA0A1Y7VIM3 128 aa7.76□□□□□ -1.17
Msx1-201ENSMUST00000063116 Gm6217A0A1Y7VJK9 128 aa7.76□□□□□ -1.17
Msx1-201ENSMUST00000063116 Tnp1P10856 55 aa7.66□□□□□ -1.18
Msx1-201ENSMUST00000063116 Mdn1A2ANY6 5589 aaKnown RBP7.59□□□□□ -1.19
Msx1-201ENSMUST00000063116 A0A1Y7VJ07 166 aa7.51□□□□□ -1.21
Msx1-201ENSMUST00000063116 Krtap9-3Q3V2C1 136 aa7.5□□□□□ -1.21
Msx1-201ENSMUST00000063116 Lce1gQ9D195 139 aa7.46□□□□□ -1.22
Msx1-201ENSMUST00000063116 Krtap4-2B1AQ85 167 aa7.43□□□□□ -1.22
Msx1-201ENSMUST00000063116 Krtap4-6Q3V4B7 195 aa7.42□□□□□ -1.22
Msx1-201ENSMUST00000063116 Lce1hQ9D6R3 140 aa7.42□□□□□ -1.22
Msx1-201ENSMUST00000063116 Krtap22-2J3QNX6 67 aa7.39□□□□□ -1.23
Msx1-201ENSMUST00000063116 Gm11596B1AQB0 205 aa7.26□□□□□ -1.25
Msx1-201ENSMUST00000063116 2310046K23RikA0A0A6YVW6 87 aa7.25□□□□□ -1.25
Msx1-201ENSMUST00000063116 A030014E15RikA0A1Y7VJV2 120 aa7.25□□□□□ -1.25
Msx1-201ENSMUST00000063116 Syne2Q6ZWQ0 6874 aaKnown RBP7.17□□□□□ -1.26
Msx1-201ENSMUST00000063116 Gm9112A2AI92 75 aa7.13□□□□□ -1.27
Msx1-201ENSMUST00000063116 Gm11562A0PK51 136 aa7.1□□□□□ -1.27
Msx1-201ENSMUST00000063116 Gm11564A2A4L9 201 aa7.07□□□□□ -1.28
Msx1-201ENSMUST00000063116 Gm11595B1AQA7 289 aa7.07□□□□□ -1.28
Msx1-201ENSMUST00000063116 Krtap4-8B1AQA8 209 aa7.07□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms