RNA–Protein interactions for RNA: ENSMUST00000053252.8

Ctxn1-201, Transcript of Cortexin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctxn1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctxn1-201ENSMUST00000053252 Gm11596B1AQB0 205 aa10.64□□□□□ -0.71
Ctxn1-201ENSMUST00000053252 Coa5Q99M07 74 aa10.6□□□□□ -0.71
Ctxn1-201ENSMUST00000053252 Defb1P56386 69 aa10.58□□□□□ -0.72
Ctxn1-201ENSMUST00000053252 Krtap3-1A2A591 98 aa10.49□□□□□ -0.73
Ctxn1-201ENSMUST00000053252 B930094E09RikQ8C4T2 136 aa10.48□□□□□ -0.73
Ctxn1-201ENSMUST00000053252 SptssbQ925E8 76 aa10.48□□□□□ -0.73
Ctxn1-201ENSMUST00000053252 Smlr1J3QMJ4 66 aa10.47□□□□□ -0.73
Ctxn1-201ENSMUST00000053252 Cox6b2Q80ZN9 88 aa10.46□□□□□ -0.73
Ctxn1-201ENSMUST00000053252 Krtap4-6Q3V4B7 195 aa10.45□□□□□ -0.74
Ctxn1-201ENSMUST00000053252 Gm17606F6ZL36 78 aa10.37□□□□□ -0.75
Ctxn1-201ENSMUST00000053252 Muc5bE9Q5I3 4800 aa10.32□□□□□ -0.76
Ctxn1-201ENSMUST00000053252 Smim20D3Z7Q2 69 aa10.3□□□□□ -0.76
Ctxn1-201ENSMUST00000053252 Pet100P0DJE0 76 aa10.29□□□□□ -0.76
Ctxn1-201ENSMUST00000053252 Lce1jD3YUU5 139 aa10.28□□□□□ -0.76
Ctxn1-201ENSMUST00000053252 Prr13Q9CQJ5 137 aa10.28□□□□□ -0.76
Ctxn1-201ENSMUST00000053252 Krtap9-5A2A5X3 358 aa10.27□□□□□ -0.77
Ctxn1-201ENSMUST00000053252 SnurfQ9WU12 71 aa10.27□□□□□ -0.77
Ctxn1-201ENSMUST00000053252 Krtap4-1Q3UUY3 169 aa10.26□□□□□ -0.77
Ctxn1-201ENSMUST00000053252 Gm19426M0QWC7 77 aa10.25□□□□□ -0.77
Ctxn1-201ENSMUST00000053252 Tmem258P61166 79 aa10.25□□□□□ -0.77
Ctxn1-201ENSMUST00000053252 Krtap19-2Q925I0 141 aa10.24□□□□□ -0.77
Ctxn1-201ENSMUST00000053252 Gm20661K7N787 53 aa10.21□□□□□ -0.77
Ctxn1-201ENSMUST00000053252 BC029722A0A0N4SW31 51 aa10.16□□□□□ -0.78
Ctxn1-201ENSMUST00000053252 Cdc42se1Q8BHL7 80 aa10.16□□□□□ -0.78
Ctxn1-201ENSMUST00000053252 Gm19935A0A1B0GSF9 52 aa10.15□□□□□ -0.78
Ctxn1-201ENSMUST00000053252 Gm20537G3UYK7 97 aa10.13□□□□□ -0.79
Ctxn1-201ENSMUST00000053252 Gm10382Q3V0T5 144 aa10.11□□□□□ -0.79
Ctxn1-201ENSMUST00000053252 H2al1aQ5M8Q2 105 aa10.06□□□□□ -0.8
Ctxn1-201ENSMUST00000053252 H2al1eQ810S6 105 aa10.06□□□□□ -0.8
Ctxn1-201ENSMUST00000053252 Gm11564A2A4L9 201 aa10.05□□□□□ -0.8
Ctxn1-201ENSMUST00000053252 Gm11563B1AQ90 168 aa10.05□□□□□ -0.8
Ctxn1-201ENSMUST00000053252 Gm11595B1AQA7 289 aa10.05□□□□□ -0.8
Ctxn1-201ENSMUST00000053252 Krtap4-8B1AQA8 209 aa10.05□□□□□ -0.8
Ctxn1-201ENSMUST00000053252 Mdn1A2ANY6 5589 aaKnown RBP10.04□□□□□ -0.8
Ctxn1-201ENSMUST00000053252 Gm10197F6QEY5 67 aa10.01□□□□□ -0.81
Ctxn1-201ENSMUST00000053252 Krtap12-1Q9Z287 130 aa9.99□□□□□ -0.81
Ctxn1-201ENSMUST00000053252 Phxr4P15974 95 aa9.94□□□□□ -0.82
Ctxn1-201ENSMUST00000053252 Serp1Q9Z1W5 66 aa9.94□□□□□ -0.82
Ctxn1-201ENSMUST00000053252 Uqcr11Q9CPX8 56 aa9.92□□□□□ -0.82
Ctxn1-201ENSMUST00000053252 Pla2g10Q9QXX3 151 aa9.92□□□□□ -0.82
Ctxn1-201ENSMUST00000053252 Limd2Q8BGB5 128 aa9.91□□□□□ -0.82
Ctxn1-201ENSMUST00000053252 CriptO70333 101 aa9.9□□□□□ -0.82
Ctxn1-201ENSMUST00000053252 Brk1Q91VR8 75 aa9.87□□□□□ -0.83
Ctxn1-201ENSMUST00000053252 H2al1bA0A087WP11 105 aa9.84□□□□□ -0.83
Ctxn1-201ENSMUST00000053252 Sec61gP60060 68 aa9.84□□□□□ -0.83
Ctxn1-201ENSMUST00000053252 Gm6358A0A087WPH4 74 aa9.83□□□□□ -0.84
Ctxn1-201ENSMUST00000053252 Krtap19-9aF8WH65 55 aa9.81□□□□□ -0.84
Ctxn1-201ENSMUST00000053252 SmcpP15265 143 aa9.81□□□□□ -0.84
Ctxn1-201ENSMUST00000053252 Spink7Q6IE32 76 aa9.8□□□□□ -0.84
Ctxn1-201ENSMUST00000053252 Prm2P07978 107 aa9.78□□□□□ -0.84
Ctxn1-201ENSMUST00000053252 Krtap4-9B1AQA9 244 aa9.73□□□□□ -0.85
Ctxn1-201ENSMUST00000053252 Ndufb1P0DN34 57 aa9.73□□□□□ -0.85
Ctxn1-201ENSMUST00000053252 Rps28P62858 69 aaKnown RBP9.69□□□□□ -0.86
Ctxn1-201ENSMUST00000053252 Gm9955Q8CEJ8 102 aa9.66□□□□□ -0.86
Ctxn1-201ENSMUST00000053252 Mt4P47945 62 aa9.55□□□□□ -0.88
Ctxn1-201ENSMUST00000053252 Gm17402F6Z0L5 76 aa9.48□□□□□ -0.89
Ctxn1-201ENSMUST00000053252 Sprr2a3Q4KL71 83 aa9.43□□□□□ -0.9
Ctxn1-201ENSMUST00000053252 Sprr2a1Q9CQK8 83 aa9.43□□□□□ -0.9
Ctxn1-201ENSMUST00000053252 Lce1iQ9D6P5 149 aa9.4□□□□□ -0.9
Ctxn1-201ENSMUST00000053252 Krtap4-13Q9D7P3 165 aa9.39□□□□□ -0.91
Ctxn1-201ENSMUST00000053252 Fsip2A2ARZ3 6995 aa9.39□□□□□ -0.91
Ctxn1-201ENSMUST00000053252 Krtap6-3A0A087WQL6 57 aa9.33□□□□□ -0.92
Ctxn1-201ENSMUST00000053252 Krtap9-3Q3V2C1 136 aa9.31□□□□□ -0.92
Ctxn1-201ENSMUST00000053252 Mt2P02798 61 aa9.26□□□□□ -0.93
Ctxn1-201ENSMUST00000053252 Lce1a2Q9D1K4 149 aa9.23□□□□□ -0.93
Ctxn1-201ENSMUST00000053252 Krtap8-1O08633 61 aa9.18□□□□□ -0.94
Ctxn1-201ENSMUST00000053252 Sprr2kO70562 68 aa9.16□□□□□ -0.94
Ctxn1-201ENSMUST00000053252 Lce1bQ9D149 137 aa9.1□□□□□ -0.95
Ctxn1-201ENSMUST00000053252 Gm19668J3QMD1 248 aa9.06□□□□□ -0.96
Ctxn1-201ENSMUST00000053252 H2al1kJ3QP08 105 aa9.06□□□□□ -0.96
Ctxn1-201ENSMUST00000053252 Lce1lQ9D1G7 135 aa9.02□□□□□ -0.97
Ctxn1-201ENSMUST00000053252 Sox16Q62247 57 aa9□□□□□ -0.97
Ctxn1-201ENSMUST00000053252 Gm38119A0A0A6YX29 146 aa8.99□□□□□ -0.97
Ctxn1-201ENSMUST00000053252 2300003K06RikA2A4M0 262 aa8.98□□□□□ -0.97
Ctxn1-201ENSMUST00000053252 4933415A04RikQ9D443 101 aa8.93□□□□□ -0.98
Ctxn1-201ENSMUST00000053252 Gm3880A0A1B0GSB3 72 aa8.9□□□□□ -0.98
Ctxn1-201ENSMUST00000053252 H2al1mQ9DAD9 105 aa8.89□□□□□ -0.99
Ctxn1-201ENSMUST00000053252 Pcp4P63054 62 aa8.88□□□□□ -0.99
Ctxn1-201ENSMUST00000053252 Krtap4-7Q9D732 168 aa8.88□□□□□ -0.99
Ctxn1-201ENSMUST00000053252 Gm21887J3QQ04 176 aa8.83□□□□□ -1
Ctxn1-201ENSMUST00000053252 Krtap22-2J3QNX6 67 aa8.82□□□□□ -1
Ctxn1-201ENSMUST00000053252 Ndufs5Q99LY9 106 aa8.78□□□□□ -1
Ctxn1-201ENSMUST00000053252 Camk2n1Q6QWF9 78 aa8.77□□□□□ -1.01
Ctxn1-201ENSMUST00000053252 Krtap19-9bQ99NG9 58 aa8.61□□□□□ -1.03
Ctxn1-201ENSMUST00000053252 Gm3646F6S692 53 aa8.58□□□□□ -1.04
Ctxn1-201ENSMUST00000053252 Lce1a1Q9CQH5 143 aa8.58□□□□□ -1.04
Ctxn1-201ENSMUST00000053252 Gm12216A0A1W2P827 62 aa8.57□□□□□ -1.04
Ctxn1-201ENSMUST00000053252 Sprr2gO70558 76 aa8.56□□□□□ -1.04
Ctxn1-201ENSMUST00000053252 Krtap20-2E9Q0A8 60 aa8.5□□□□□ -1.05
Ctxn1-201ENSMUST00000053252 Gm10337F7DEP7 55 aa8.49□□□□□ -1.05
Ctxn1-201ENSMUST00000053252 Lce1hQ9D6R3 140 aa8.47□□□□□ -1.05
Ctxn1-201ENSMUST00000053252 Romo1P60603 79 aa8.41□□□□□ -1.06
Ctxn1-201ENSMUST00000053252 Lce1eQ9D139 143 aa8.37□□□□□ -1.07
Ctxn1-201ENSMUST00000053252 2310046K23RikA0A0A6YVW6 87 aa8.29□□□□□ -1.08
Ctxn1-201ENSMUST00000053252 Eppk1Q8R0W0 6548 aa8.16□□□□□ -1.1
Ctxn1-201ENSMUST00000053252 Lce1dQ9D731 133 aa8.08□□□□□ -1.12
Ctxn1-201ENSMUST00000053252 A0A1Y7VJH8 109 aa8.07□□□□□ -1.12
Ctxn1-201ENSMUST00000053252 Krtap7-1Q9D3I6 87 aa7.92□□□□□ -1.14
Ctxn1-201ENSMUST00000053252 Krtap5-2Q9D5Z7 189 aa7.88□□□□□ -1.15
Ctxn1-201ENSMUST00000053252 Sprr2iO70560 76 aa7.83□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 5.9 ms