RNA–Protein interactions for RNA: ENSMUST00000043498.7

Hdac3-201, Transcript of Histone deacetylase 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hdac3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3-201ENSMUST00000043498 Gm19935A0A1B0GSF9 52 aa11.19□□□□□ -0.62
Hdac3-201ENSMUST00000043498 Krtap3-1A2A591 98 aa11.19□□□□□ -0.62
Hdac3-201ENSMUST00000043498 Cdc42se1Q8BHL7 80 aa11.13□□□□□ -0.63
Hdac3-201ENSMUST00000043498 Smim20D3Z7Q2 69 aa11.12□□□□□ -0.63
Hdac3-201ENSMUST00000043498 Gm20661K7N787 53 aa11.12□□□□□ -0.63
Hdac3-201ENSMUST00000043498 Gm10061D3Z714 54 aa11.1□□□□□ -0.63
Hdac3-201ENSMUST00000043498 Gm17606F6ZL36 78 aa11.08□□□□□ -0.64
Hdac3-201ENSMUST00000043498 SspoQ8CG65 4998 aa11.02□□□□□ -0.64
Hdac3-201ENSMUST00000043498 Gm10197F6QEY5 67 aa10.99□□□□□ -0.65
Hdac3-201ENSMUST00000043498 SmcpP15265 143 aa10.99□□□□□ -0.65
Hdac3-201ENSMUST00000043498 H2al1aQ5M8Q2 105 aa10.97□□□□□ -0.65
Hdac3-201ENSMUST00000043498 H2al1eQ810S6 105 aa10.97□□□□□ -0.65
Hdac3-201ENSMUST00000043498 Serp1Q9Z1W5 66 aa10.96□□□□□ -0.66
Hdac3-201ENSMUST00000043498 Brk1Q91VR8 75 aa10.95□□□□□ -0.66
Hdac3-201ENSMUST00000043498 Gm10382Q3V0T5 144 aa10.91□□□□□ -0.66
Hdac3-201ENSMUST00000043498 Phxr4P15974 95 aa10.88□□□□□ -0.67
Hdac3-201ENSMUST00000043498 Gm19426M0QWC7 77 aa10.84□□□□□ -0.67
Hdac3-201ENSMUST00000043498 BC029722A0A0N4SW31 51 aa10.79□□□□□ -0.68
Hdac3-201ENSMUST00000043498 Uqcr11Q9CPX8 56 aa10.77□□□□□ -0.68
Hdac3-201ENSMUST00000043498 H2al1bA0A087WP11 105 aa10.77□□□□□ -0.69
Hdac3-201ENSMUST00000043498 Gm11569B1AQB1 180 aa10.75□□□□□ -0.69
Hdac3-201ENSMUST00000043498 Gm20537G3UYK7 97 aa10.74□□□□□ -0.69
Hdac3-201ENSMUST00000043498 Rps28P62858 69 aaKnown RBP10.73□□□□□ -0.69
Hdac3-201ENSMUST00000043498 Limd2Q8BGB5 128 aa10.66□□□□□ -0.7
Hdac3-201ENSMUST00000043498 Sec61gP60060 68 aa10.6□□□□□ -0.71
Hdac3-201ENSMUST00000043498 Ndufb1P0DN34 57 aa10.6□□□□□ -0.71
Hdac3-201ENSMUST00000043498 Lce1jD3YUU5 139 aa10.56□□□□□ -0.72
Hdac3-201ENSMUST00000043498 Krtap12-1Q9Z287 130 aa10.53□□□□□ -0.72
Hdac3-201ENSMUST00000043498 Krtap19-2Q925I0 141 aa10.44□□□□□ -0.74
Hdac3-201ENSMUST00000043498 Spink7Q6IE32 76 aa10.43□□□□□ -0.74
Hdac3-201ENSMUST00000043498 Krtap9-5A2A5X3 358 aa10.41□□□□□ -0.74
Hdac3-201ENSMUST00000043498 CriptO70333 101 aa10.41□□□□□ -0.74
Hdac3-201ENSMUST00000043498 Krtap17-1A2A5X6 109 aa10.39□□□□□ -0.75
Hdac3-201ENSMUST00000043498 Gm9955Q8CEJ8 102 aa10.39□□□□□ -0.75
Hdac3-201ENSMUST00000043498 Krtap19-9aF8WH65 55 aa10.34□□□□□ -0.75
Hdac3-201ENSMUST00000043498 Gm11562A0PK51 136 aa10.33□□□□□ -0.76
Hdac3-201ENSMUST00000043498 B930094E09RikQ8C4T2 136 aa10.31□□□□□ -0.76
Hdac3-201ENSMUST00000043498 Krtap4-2B1AQ85 167 aa10.3□□□□□ -0.76
Hdac3-201ENSMUST00000043498 Pla2g10Q9QXX3 151 aa10.25□□□□□ -0.77
Hdac3-201ENSMUST00000043498 Prm2P07978 107 aa10.24□□□□□ -0.77
Hdac3-201ENSMUST00000043498 Lce1gQ9D195 139 aa10.21□□□□□ -0.77
Hdac3-201ENSMUST00000043498 Muc5bE9Q5I3 4800 aa10.19□□□□□ -0.78
Hdac3-201ENSMUST00000043498 Pcp4P63054 62 aa10.16□□□□□ -0.78
Hdac3-201ENSMUST00000043498 Gm17402F6Z0L5 76 aa10.08□□□□□ -0.8
Hdac3-201ENSMUST00000043498 Sprr2a3Q4KL71 83 aa10.07□□□□□ -0.8
Hdac3-201ENSMUST00000043498 Sprr2a1Q9CQK8 83 aa10.07□□□□□ -0.8
Hdac3-201ENSMUST00000043498 Gm11555B1AQ89 175 aa10.06□□□□□ -0.8
Hdac3-201ENSMUST00000043498 Syne2Q6ZWQ0 6874 aaKnown RBP10.03□□□□□ -0.8
Hdac3-201ENSMUST00000043498 Gm6358A0A087WPH4 74 aa9.92□□□□□ -0.82
Hdac3-201ENSMUST00000043498 H2al1kJ3QP08 105 aa9.92□□□□□ -0.82
Hdac3-201ENSMUST00000043498 4933415A04RikQ9D443 101 aa9.92□□□□□ -0.82
Hdac3-201ENSMUST00000043498 Lce1iQ9D6P5 149 aa9.9□□□□□ -0.82
Hdac3-201ENSMUST00000043498 Mdn1A2ANY6 5589 aaKnown RBP9.9□□□□□ -0.82
Hdac3-201ENSMUST00000043498 Sox16Q62247 57 aa9.9□□□□□ -0.82
Hdac3-201ENSMUST00000043498 Gm11596B1AQB0 205 aa9.85□□□□□ -0.83
Hdac3-201ENSMUST00000043498 Krtap4-6Q3V4B7 195 aa9.85□□□□□ -0.83
Hdac3-201ENSMUST00000043498 Lce1a2Q9D1K4 149 aa9.76□□□□□ -0.85
Hdac3-201ENSMUST00000043498 Gm3880A0A1B0GSB3 72 aa9.74□□□□□ -0.85
Hdac3-201ENSMUST00000043498 H2al1mQ9DAD9 105 aa9.72□□□□□ -0.85
Hdac3-201ENSMUST00000043498 Ndufs5Q99LY9 106 aa9.69□□□□□ -0.86
Hdac3-201ENSMUST00000043498 Krtap4-1Q3UUY3 169 aa9.67□□□□□ -0.86
Hdac3-201ENSMUST00000043498 Gm19668J3QMD1 248 aa9.63□□□□□ -0.87
Hdac3-201ENSMUST00000043498 Mt2P02798 61 aa9.56□□□□□ -0.88
Hdac3-201ENSMUST00000043498 Gm3646F6S692 53 aa9.54□□□□□ -0.88
Hdac3-201ENSMUST00000043498 Gm10337F7DEP7 55 aa9.53□□□□□ -0.88
Hdac3-201ENSMUST00000043498 Gm21887J3QQ04 176 aa9.46□□□□□ -0.9
Hdac3-201ENSMUST00000043498 Gm11564A2A4L9 201 aa9.43□□□□□ -0.9
Hdac3-201ENSMUST00000043498 Gm11563B1AQ90 168 aa9.43□□□□□ -0.9
Hdac3-201ENSMUST00000043498 Gm11595B1AQA7 289 aa9.43□□□□□ -0.9
Hdac3-201ENSMUST00000043498 Krtap4-8B1AQA8 209 aa9.43□□□□□ -0.9
Hdac3-201ENSMUST00000043498 Camk2n1Q6QWF9 78 aa9.37□□□□□ -0.91
Hdac3-201ENSMUST00000043498 Gm12216A0A1W2P827 62 aa9.31□□□□□ -0.92
Hdac3-201ENSMUST00000043498 Krtap8-1O08633 61 aa9.27□□□□□ -0.93
Hdac3-201ENSMUST00000043498 Romo1P60603 79 aa9.17□□□□□ -0.94
Hdac3-201ENSMUST00000043498 Krtap4-9B1AQA9 244 aa9.16□□□□□ -0.94
Hdac3-201ENSMUST00000043498 Krtap19-9bQ99NG9 58 aa9.13□□□□□ -0.95
Hdac3-201ENSMUST00000043498 Fsip2A2ARZ3 6995 aa9.12□□□□□ -0.95
Hdac3-201ENSMUST00000043498 Krtap9-3Q3V2C1 136 aa9.08□□□□□ -0.96
Hdac3-201ENSMUST00000043498 Krtap22-2J3QNX6 67 aa9.07□□□□□ -0.96
Hdac3-201ENSMUST00000043498 Mt4P47945 62 aa9.07□□□□□ -0.96
Hdac3-201ENSMUST00000043498 Lce1bQ9D149 137 aa8.83□□□□□ -1
Hdac3-201ENSMUST00000043498 Krtap4-13Q9D7P3 165 aa8.82□□□□□ -1
Hdac3-201ENSMUST00000043498 Gm38119A0A0A6YX29 146 aa8.63□□□□□ -1.03
Hdac3-201ENSMUST00000043498 Krtap6-3A0A087WQL6 57 aa8.61□□□□□ -1.03
Hdac3-201ENSMUST00000043498 Sprr2kO70562 68 aa8.61□□□□□ -1.03
Hdac3-201ENSMUST00000043498 2300003K06RikA2A4M0 262 aa8.57□□□□□ -1.04
Hdac3-201ENSMUST00000043498 Lce1hQ9D6R3 140 aa8.49□□□□□ -1.05
Hdac3-201ENSMUST00000043498 Krtap7-1Q9D3I6 87 aa8.47□□□□□ -1.05
Hdac3-201ENSMUST00000043498 SvipQ3UZP4 77 aa8.44□□□□□ -1.06
Hdac3-201ENSMUST00000043498 Krtap4-7Q9D732 168 aa8.41□□□□□ -1.06
Hdac3-201ENSMUST00000043498 Lce1lQ9D1G7 135 aa8.39□□□□□ -1.07
Hdac3-201ENSMUST00000043498 Gm40193A0A1B0GT39 78 aa8.3□□□□□ -1.08
Hdac3-201ENSMUST00000043498 Tnp1P10856 55 aa8.27□□□□□ -1.09
Hdac3-201ENSMUST00000043498 Gm10272F7CZ33 110 aa8.08□□□□□ -1.12
Hdac3-201ENSMUST00000043498 Sprr2gO70558 76 aa8.03□□□□□ -1.12
Hdac3-201ENSMUST00000043498 Lce1dQ9D731 133 aa7.99□□□□□ -1.13
Hdac3-201ENSMUST00000043498 A0A1Y7VJH8 109 aa7.94□□□□□ -1.14
Hdac3-201ENSMUST00000043498 Lce1a1Q9CQH5 143 aa7.93□□□□□ -1.14
Hdac3-201ENSMUST00000043498 Syne1Q6ZWR6 8799 aa7.91□□□□□ -1.14
Hdac3-201ENSMUST00000043498 Krtap20-2E9Q0A8 60 aa7.88□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms