RNA–Protein interactions for RNA: ENSMUST00000039144.6

Clstn1-201, Transcript of Calsyntenin-1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clstn1, Length 3,319 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn1-201ENSMUST00000039144 Mycbp2Q7TPH6 4711 aa7.93□□□□□ -1.14
Clstn1-201ENSMUST00000039144 HydinQ80W93 5154 aa7.88□□□□□ -1.15
Clstn1-201ENSMUST00000039144 Gm9955Q8CEJ8 102 aa7.86□□□□□ -1.15
Clstn1-201ENSMUST00000039144 Gm21887J3QQ04 176 aa7.83□□□□□ -1.16
Clstn1-201ENSMUST00000039144 Gm5965D3Z724 196 aa7.81□□□□□ -1.16
Clstn1-201ENSMUST00000039144 Rpl37Q9D823 97 aa7.81□□□□□ -1.16
Clstn1-201ENSMUST00000039144 Lce1mQ9CR91 182 aa7.8□□□□□ -1.16
Clstn1-201ENSMUST00000039144 PcloQ9QYX7 5068 aa7.77□□□□□ -1.17
Clstn1-201ENSMUST00000039144 Ndufaf8A2AMZ4 74 aa7.75□□□□□ -1.17
Clstn1-201ENSMUST00000039144 Prm2P07978 107 aa7.74□□□□□ -1.17
Clstn1-201ENSMUST00000039144 Gm5767A0A0J9YTU8 78 aa7.71□□□□□ -1.17
Clstn1-201ENSMUST00000039144 Lrp2A2ARV4 4660 aa7.64□□□□□ -1.19
Clstn1-201ENSMUST00000039144 Gm10318A0A1W2P728 225 aa7.62□□□□□ -1.19
Clstn1-201ENSMUST00000039144 2310057N15RikQ9D6T8 200 aa7.6□□□□□ -1.19
Clstn1-201ENSMUST00000039144 Krtap3-1A2A591 98 aa7.56□□□□□ -1.2
Clstn1-201ENSMUST00000039144 Gm19426M0QWC7 77 aa7.52□□□□□ -1.21
Clstn1-201ENSMUST00000039144 Herc1E9PZP8 4859 aa7.49□□□□□ -1.21
Clstn1-201ENSMUST00000039144 Gm18596A0A1W2P860 280 aa7.39□□□□□ -1.23
Clstn1-201ENSMUST00000039144 Spink7Q6IE32 76 aa7.39□□□□□ -1.23
Clstn1-201ENSMUST00000039144 Krtap7-1Q9D3I6 87 aa7.39□□□□□ -1.23
Clstn1-201ENSMUST00000039144 Gm19668J3QMD1 248 aa7.38□□□□□ -1.23
Clstn1-201ENSMUST00000039144 B930094E09RikQ8C4T2 136 aa7.36□□□□□ -1.23
Clstn1-201ENSMUST00000039144 Crct1Q6PAI5 102 aa7.32□□□□□ -1.24
Clstn1-201ENSMUST00000039144 Gm17416Q30KP4 66 aa7.3□□□□□ -1.24
Clstn1-201ENSMUST00000039144 Prm1P02319 51 aa7.28□□□□□ -1.24
Clstn1-201ENSMUST00000039144 Gm9789Q8BIG3 52 aa7.28□□□□□ -1.24
Clstn1-201ENSMUST00000039144 Ush2AQ2QI47 5193 aa7.28□□□□□ -1.24
Clstn1-201ENSMUST00000039144 Sec61bQ9CQS8 96 aaKnown RBP7.27□□□□□ -1.24
Clstn1-201ENSMUST00000039144 2210017I01RikA0A0A6YVV1 95 aa7.25□□□□□ -1.25
Clstn1-201ENSMUST00000039144 Gm19402J3QJV4 266 aa7.24□□□□□ -1.25
Clstn1-201ENSMUST00000039144 BC029722A0A0N4SW31 51 aa7.24□□□□□ -1.25
Clstn1-201ENSMUST00000039144 Hmcn2A2AJ76 5100 aa7.22□□□□□ -1.25
Clstn1-201ENSMUST00000039144 Gm7735D3YX18 52 aa7.22□□□□□ -1.25
Clstn1-201ENSMUST00000039144 Fam229aB2KGE5 128 aa7.13□□□□□ -1.27
Clstn1-201ENSMUST00000039144 Gm9112A2AI92 75 aa7.12□□□□□ -1.27
Clstn1-201ENSMUST00000039144 Krtap13-1Q8K198 168 aa7.11□□□□□ -1.27
Clstn1-201ENSMUST00000039144 Krtap16-3Q8C1I6 86 aa7.09□□□□□ -1.27
Clstn1-201ENSMUST00000039144 Krtap19-1Q925H2 87 aa7.06□□□□□ -1.28
Clstn1-201ENSMUST00000039144 Krtap1-3A2A588 173 aa7.05□□□□□ -1.28
Clstn1-201ENSMUST00000039144 Ubr4A2AN08 5180 aa7.04□□□□□ -1.28
Clstn1-201ENSMUST00000039144 Krtap19-3Q925H6 87 aa7.01□□□□□ -1.29
Clstn1-201ENSMUST00000039144 4932415D10RikA0A1W2P6U8 4986 aa6.97□□□□□ -1.29
Clstn1-201ENSMUST00000039144 Camk2n1Q6QWF9 78 aa6.96□□□□□ -1.29
Clstn1-201ENSMUST00000039144 Krtap1-5A2A590 122 aa6.93□□□□□ -1.3
Clstn1-201ENSMUST00000039144 Gm40193A0A1B0GT39 78 aa6.91□□□□□ -1.3
Clstn1-201ENSMUST00000039144 ZanO88799 5376 aa6.91□□□□□ -1.3
Clstn1-201ENSMUST00000039144 Gm17402F6Z0L5 76 aa6.88□□□□□ -1.31
Clstn1-201ENSMUST00000039144 Rnf213E9Q555 5152 aaKnown RBP6.86□□□□□ -1.31
Clstn1-201ENSMUST00000039144 Sprr2a3Q4KL71 83 aa6.84□□□□□ -1.31
Clstn1-201ENSMUST00000039144 Sprr2a1Q9CQK8 83 aa6.84□□□□□ -1.31
Clstn1-201ENSMUST00000039144 Krtap1-4Q3V2D6 188 aa6.82□□□□□ -1.32
Clstn1-201ENSMUST00000039144 Fat4Q2PZL6 4981 aa6.77□□□□□ -1.33
Clstn1-201ENSMUST00000039144 LorP18165 486 aa6.76□□□□□ -1.33
Clstn1-201ENSMUST00000039144 SspoQ8CG65 4998 aa6.58□□□□□ -1.36
Clstn1-201ENSMUST00000039144 Gm10061D3Z714 54 aa6.45□□□□□ -1.38
Clstn1-201ENSMUST00000039144 Lce1jD3YUU5 139 aa6.37□□□□□ -1.39
Clstn1-201ENSMUST00000039144 Tnp1P10856 55 aa6.36□□□□□ -1.39
Clstn1-201ENSMUST00000039144 Krtap12-1Q9Z287 130 aa6.35□□□□□ -1.39
Clstn1-201ENSMUST00000039144 Krtap19-9aF8WH65 55 aa6.26□□□□□ -1.41
Clstn1-201ENSMUST00000039144 Krtap19-2Q925I0 141 aa6.25□□□□□ -1.41
Clstn1-201ENSMUST00000039144 Krtap17-1A2A5X6 109 aa6.2□□□□□ -1.42
Clstn1-201ENSMUST00000039144 Krtap9-5A2A5X3 358 aa6.19□□□□□ -1.42
Clstn1-201ENSMUST00000039144 Gm11569B1AQB1 180 aa6.15□□□□□ -1.42
Clstn1-201ENSMUST00000039144 Muc5bE9Q5I3 4800 aa6.06□□□□□ -1.44
Clstn1-201ENSMUST00000039144 Lce1iQ9D6P5 149 aa6□□□□□ -1.45
Clstn1-201ENSMUST00000039144 Krtap9-3Q3V2C1 136 aa5.98□□□□□ -1.45
Clstn1-201ENSMUST00000039144 2310046K23RikA0A0A6YVW6 87 aa5.97□□□□□ -1.45
Clstn1-201ENSMUST00000039144 Gm6358A0A087WPH4 74 aa5.92□□□□□ -1.46
Clstn1-201ENSMUST00000039144 Lce1a2Q9D1K4 149 aa5.92□□□□□ -1.46
Clstn1-201ENSMUST00000039144 Krtap8-1O08633 61 aa5.92□□□□□ -1.46
Clstn1-201ENSMUST00000039144 Mdn1A2ANY6 5589 aaKnown RBP5.87□□□□□ -1.47
Clstn1-201ENSMUST00000039144 Lce1hQ9D6R3 140 aa5.84□□□□□ -1.47
Clstn1-201ENSMUST00000039144 Krtap19-9bQ99NG9 58 aa5.78□□□□□ -1.48
Clstn1-201ENSMUST00000039144 Gm11555B1AQ89 175 aa5.76□□□□□ -1.49
Clstn1-201ENSMUST00000039144 Lce1dQ9D731 133 aa5.75□□□□□ -1.49
Clstn1-201ENSMUST00000039144 Syne1Q6ZWR6 8799 aa5.73□□□□□ -1.49
Clstn1-201ENSMUST00000039144 Lce1gQ9D195 139 aa5.73□□□□□ -1.49
Clstn1-201ENSMUST00000039144 Mt2P02798 61 aa5.72□□□□□ -1.49
Clstn1-201ENSMUST00000039144 Krtap4-2B1AQ85 167 aa5.71□□□□□ -1.5
Clstn1-201ENSMUST00000039144 Gm11562A0PK51 136 aa5.68□□□□□ -1.5
Clstn1-201ENSMUST00000039144 Muc16A0A140LJ72 8478 aa5.62□□□□□ -1.51
Clstn1-201ENSMUST00000039144 Krtap4-6Q3V4B7 195 aa5.58□□□□□ -1.52
Clstn1-201ENSMUST00000039144 Gm11596B1AQB0 205 aa5.54□□□□□ -1.52
Clstn1-201ENSMUST00000039144 Lce1eQ9D139 143 aa5.52□□□□□ -1.53
Clstn1-201ENSMUST00000039144 Krtap4-1Q3UUY3 169 aa5.5□□□□□ -1.53
Clstn1-201ENSMUST00000039144 Syne2Q6ZWQ0 6874 aaKnown RBP5.49□□□□□ -1.53
Clstn1-201ENSMUST00000039144 Krtap22-2J3QNX6 67 aa5.41□□□□□ -1.54
Clstn1-201ENSMUST00000039144 Gm10272F7CZ33 110 aa5.37□□□□□ -1.55
Clstn1-201ENSMUST00000039144 Gm11938Q9D3H4 131 aa5.37□□□□□ -1.55
Clstn1-201ENSMUST00000039144 Sprr2gO70558 76 aa5.35□□□□□ -1.55
Clstn1-201ENSMUST00000039144 Gm11564A2A4L9 201 aa5.35□□□□□ -1.55
Clstn1-201ENSMUST00000039144 Gm11563B1AQ90 168 aa5.35□□□□□ -1.55
Clstn1-201ENSMUST00000039144 Gm11595B1AQA7 289 aa5.35□□□□□ -1.55
Clstn1-201ENSMUST00000039144 Krtap4-8B1AQA8 209 aa5.35□□□□□ -1.55
Clstn1-201ENSMUST00000039144 4933428G20RikQ9D3X4 101 aa5.25□□□□□ -1.57
Clstn1-201ENSMUST00000039144 Lce1cQ9D1C5 147 aa5.2□□□□□ -1.58
Clstn1-201ENSMUST00000039144 Sprr2dO70555 85 aa5.18□□□□□ -1.58
Clstn1-201ENSMUST00000039144 Krtap4-9B1AQA9 244 aa5.18□□□□□ -1.58
Clstn1-201ENSMUST00000039144 Lce1bQ9D149 137 aa5.17□□□□□ -1.58
Clstn1-201ENSMUST00000039144 Mt4P47945 62 aa5.15□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 125.6 ms