RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 HydinQ80W93 5154 aa9.21□□□□□ -0.94
Ccdc3-201ENSMUST00000027988 Gm17416Q30KP4 66 aa9.18□□□□□ -0.94
Ccdc3-201ENSMUST00000027988 Herc2Q4U2R1 4836 aa9.12□□□□□ -0.95
Ccdc3-201ENSMUST00000027988 Romo1P60603 79 aa9.07□□□□□ -0.96
Ccdc3-201ENSMUST00000027988 2210017I01RikA0A0A6YVV1 95 aa9.05□□□□□ -0.96
Ccdc3-201ENSMUST00000027988 Lrp2A2ARV4 4660 aa9.04□□□□□ -0.96
Ccdc3-201ENSMUST00000027988 Dnhd1D3Z2X2 4750 aa9.03□□□□□ -0.96
Ccdc3-201ENSMUST00000027988 Mp68P56379 58 aa9□□□□□ -0.97
Ccdc3-201ENSMUST00000027988 Gm21887J3QQ04 176 aa9□□□□□ -0.97
Ccdc3-201ENSMUST00000027988 2310057N15RikQ9D6T8 200 aa8.99□□□□□ -0.97
Ccdc3-201ENSMUST00000027988 Gm20538F6Z9R1 75 aa8.97□□□□□ -0.97
Ccdc3-201ENSMUST00000027988 Birc6O88738 4882 aa8.94□□□□□ -0.98
Ccdc3-201ENSMUST00000027988 Krtap13-1Q8K198 168 aa8.93□□□□□ -0.98
Ccdc3-201ENSMUST00000027988 PcloQ9QYX7 5068 aa8.85□□□□□ -0.99
Ccdc3-201ENSMUST00000027988 B930094E09RikQ8C4T2 136 aa8.82□□□□□ -1
Ccdc3-201ENSMUST00000027988 Gm19426M0QWC7 77 aa8.78□□□□□ -1
Ccdc3-201ENSMUST00000027988 BC029722A0A0N4SW31 51 aa8.75□□□□□ -1.01
Ccdc3-201ENSMUST00000027988 Gm10318A0A1W2P728 225 aa8.73□□□□□ -1.01
Ccdc3-201ENSMUST00000027988 Gm19402J3QJV4 266 aa8.73□□□□□ -1.01
Ccdc3-201ENSMUST00000027988 Crct1Q6PAI5 102 aa8.66□□□□□ -1.02
Ccdc3-201ENSMUST00000027988 Krtap1-5A2A590 122 aa8.64□□□□□ -1.03
Ccdc3-201ENSMUST00000027988 Krtap16-3Q8C1I6 86 aa8.55□□□□□ -1.04
Ccdc3-201ENSMUST00000027988 Sec61bQ9CQS8 96 aaKnown RBP8.52□□□□□ -1.05
Ccdc3-201ENSMUST00000027988 Krtap7-1Q9D3I6 87 aa8.5□□□□□ -1.05
Ccdc3-201ENSMUST00000027988 Prm2P07978 107 aa8.47□□□□□ -1.05
Ccdc3-201ENSMUST00000027988 Herc1E9PZP8 4859 aa8.43□□□□□ -1.06
Ccdc3-201ENSMUST00000027988 Gm17402F6Z0L5 76 aa8.43□□□□□ -1.06
Ccdc3-201ENSMUST00000027988 Krtap19-1Q925H2 87 aa8.4□□□□□ -1.07
Ccdc3-201ENSMUST00000027988 Ndufaf8A2AMZ4 74 aa8.39□□□□□ -1.07
Ccdc3-201ENSMUST00000027988 Sprr2a3Q4KL71 83 aa8.39□□□□□ -1.07
Ccdc3-201ENSMUST00000027988 Sprr2a1Q9CQK8 83 aa8.39□□□□□ -1.07
Ccdc3-201ENSMUST00000027988 Spink7Q6IE32 76 aa8.35□□□□□ -1.07
Ccdc3-201ENSMUST00000027988 Krtap19-3Q925H6 87 aa8.35□□□□□ -1.07
Ccdc3-201ENSMUST00000027988 Gm19668J3QMD1 248 aa8.33□□□□□ -1.08
Ccdc3-201ENSMUST00000027988 ZanO88799 5376 aa8.29□□□□□ -1.08
Ccdc3-201ENSMUST00000027988 Fam229aB2KGE5 128 aa8.28□□□□□ -1.08
Ccdc3-201ENSMUST00000027988 Ubr4A2AN08 5180 aa8.27□□□□□ -1.09
Ccdc3-201ENSMUST00000027988 4932415D10RikA0A1W2P6U8 4986 aa8.2□□□□□ -1.1
Ccdc3-201ENSMUST00000027988 Fat4Q2PZL6 4981 aa8.2□□□□□ -1.1
Ccdc3-201ENSMUST00000027988 Lce1mQ9CR91 182 aa8.18□□□□□ -1.1
Ccdc3-201ENSMUST00000027988 Krtap1-4Q3V2D6 188 aa8.14□□□□□ -1.11
Ccdc3-201ENSMUST00000027988 Ush2AQ2QI47 5193 aa8.08□□□□□ -1.12
Ccdc3-201ENSMUST00000027988 Hmcn2A2AJ76 5100 aa8.05□□□□□ -1.12
Ccdc3-201ENSMUST00000027988 Gm40193A0A1B0GT39 78 aa8.03□□□□□ -1.12
Ccdc3-201ENSMUST00000027988 Lce1jD3YUU5 139 aa7.99□□□□□ -1.13
Ccdc3-201ENSMUST00000027988 Camk2n1Q6QWF9 78 aa7.95□□□□□ -1.14
Ccdc3-201ENSMUST00000027988 Krtap1-3A2A588 173 aa7.93□□□□□ -1.14
Ccdc3-201ENSMUST00000027988 LorP18165 486 aa7.82□□□□□ -1.16
Ccdc3-201ENSMUST00000027988 Rnf213E9Q555 5152 aaKnown RBP7.82□□□□□ -1.16
Ccdc3-201ENSMUST00000027988 Gm18596A0A1W2P860 280 aa7.8□□□□□ -1.16
Ccdc3-201ENSMUST00000027988 Krtap17-1A2A5X6 109 aa7.78□□□□□ -1.16
Ccdc3-201ENSMUST00000027988 Krtap12-1Q9Z287 130 aa7.75□□□□□ -1.17
Ccdc3-201ENSMUST00000027988 Gm9789Q8BIG3 52 aa7.74□□□□□ -1.17
Ccdc3-201ENSMUST00000027988 Gm9112A2AI92 75 aa7.69□□□□□ -1.18
Ccdc3-201ENSMUST00000027988 Krtap19-9aF8WH65 55 aa7.67□□□□□ -1.18
Ccdc3-201ENSMUST00000027988 Prm1P02319 51 aa7.64□□□□□ -1.19
Ccdc3-201ENSMUST00000027988 Gm7735D3YX18 52 aa7.6□□□□□ -1.19
Ccdc3-201ENSMUST00000027988 Lce1iQ9D6P5 149 aa7.48□□□□□ -1.21
Ccdc3-201ENSMUST00000027988 Lce1a2Q9D1K4 149 aa7.44□□□□□ -1.22
Ccdc3-201ENSMUST00000027988 Tnp1P10856 55 aa7.43□□□□□ -1.22
Ccdc3-201ENSMUST00000027988 Krtap8-1O08633 61 aa7.35□□□□□ -1.23
Ccdc3-201ENSMUST00000027988 SspoQ8CG65 4998 aa7.35□□□□□ -1.23
Ccdc3-201ENSMUST00000027988 Krtap19-2Q925I0 141 aa7.34□□□□□ -1.23
Ccdc3-201ENSMUST00000027988 Krtap9-5A2A5X3 358 aa7.31□□□□□ -1.24
Ccdc3-201ENSMUST00000027988 Krtap9-3Q3V2C1 136 aa7.29□□□□□ -1.24
Ccdc3-201ENSMUST00000027988 Krtap19-9bQ99NG9 58 aa7.22□□□□□ -1.25
Ccdc3-201ENSMUST00000027988 Lce1hQ9D6R3 140 aa7.15□□□□□ -1.26
Ccdc3-201ENSMUST00000027988 2310046K23RikA0A0A6YVW6 87 aa7.11□□□□□ -1.27
Ccdc3-201ENSMUST00000027988 Gm10061D3Z714 54 aa6.96□□□□□ -1.3
Ccdc3-201ENSMUST00000027988 Muc5bE9Q5I3 4800 aa6.9□□□□□ -1.3
Ccdc3-201ENSMUST00000027988 Gm6358A0A087WPH4 74 aa6.89□□□□□ -1.31
Ccdc3-201ENSMUST00000027988 Mt2P02798 61 aa6.88□□□□□ -1.31
Ccdc3-201ENSMUST00000027988 Lce1dQ9D731 133 aa6.76□□□□□ -1.33
Ccdc3-201ENSMUST00000027988 Krtap4-1Q3UUY3 169 aa6.62□□□□□ -1.35
Ccdc3-201ENSMUST00000027988 Gm11569B1AQB1 180 aa6.55□□□□□ -1.36
Ccdc3-201ENSMUST00000027988 Lce1eQ9D139 143 aa6.53□□□□□ -1.36
Ccdc3-201ENSMUST00000027988 Mdn1A2ANY6 5589 aaKnown RBP6.49□□□□□ -1.37
Ccdc3-201ENSMUST00000027988 Gm10272F7CZ33 110 aa6.42□□□□□ -1.38
Ccdc3-201ENSMUST00000027988 Krtap22-2J3QNX6 67 aa6.39□□□□□ -1.39
Ccdc3-201ENSMUST00000027988 Sprr2gO70558 76 aa6.39□□□□□ -1.39
Ccdc3-201ENSMUST00000027988 Gm11938Q9D3H4 131 aa6.35□□□□□ -1.39
Ccdc3-201ENSMUST00000027988 Sprr2dO70555 85 aa6.26□□□□□ -1.41
Ccdc3-201ENSMUST00000027988 Lce1cQ9D1C5 147 aa6.24□□□□□ -1.41
Ccdc3-201ENSMUST00000027988 Gm11563B1AQ90 168 aa6.16□□□□□ -1.42
Ccdc3-201ENSMUST00000027988 Krtap4-7Q9D732 168 aa6.16□□□□□ -1.42
Ccdc3-201ENSMUST00000027988 4933428G20RikQ9D3X4 101 aa6.12□□□□□ -1.43
Ccdc3-201ENSMUST00000027988 Gm11555B1AQ89 175 aa6.11□□□□□ -1.43
Ccdc3-201ENSMUST00000027988 Gm11562A0PK51 136 aa6.1□□□□□ -1.43
Ccdc3-201ENSMUST00000027988 Syne1Q6ZWR6 8799 aa6.05□□□□□ -1.44
Ccdc3-201ENSMUST00000027988 Lce1fB9EJP6 147 aa6□□□□□ -1.45
Ccdc3-201ENSMUST00000027988 Lce1a1Q9CQH5 143 aa6□□□□□ -1.45
Ccdc3-201ENSMUST00000027988 Krtap4-6Q3V4B7 195 aa5.98□□□□□ -1.45
Ccdc3-201ENSMUST00000027988 Lce1gQ9D195 139 aa5.88□□□□□ -1.47
Ccdc3-201ENSMUST00000027988 Lce3bQ9CQM7 98 aa5.88□□□□□ -1.47
Ccdc3-201ENSMUST00000027988 Gm10100J3QK64 120 aa5.87□□□□□ -1.47
Ccdc3-201ENSMUST00000027988 Krtap4-2B1AQ85 167 aa5.83□□□□□ -1.48
Ccdc3-201ENSMUST00000027988 Krtap19-4Q925H7 84 aa5.81□□□□□ -1.48
Ccdc3-201ENSMUST00000027988 Gm11596B1AQB0 205 aa5.74□□□□□ -1.49
Ccdc3-201ENSMUST00000027988 Gm10142J3KMP7 120 aa5.73□□□□□ -1.49
Ccdc3-201ENSMUST00000027988 Syne2Q6ZWQ0 6874 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms