RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Gm9955Q8CEJ8 102 aa8.48□□□□□ -1.05
Trim8-201ENSMUST00000026008 Rpl37Q9D823 97 aa8.37□□□□□ -1.07
Trim8-201ENSMUST00000026008 HydinQ80W93 5154 aa8.36□□□□□ -1.07
Trim8-201ENSMUST00000026008 Kiaa1109A2AAE1 5005 aa8.35□□□□□ -1.07
Trim8-201ENSMUST00000026008 Dnah8Q91XQ0 4731 aa8.32□□□□□ -1.08
Trim8-201ENSMUST00000026008 Herc2Q4U2R1 4836 aa8.32□□□□□ -1.08
Trim8-201ENSMUST00000026008 Krtap3-1A2A591 98 aa8.22□□□□□ -1.09
Trim8-201ENSMUST00000026008 Lrp2A2ARV4 4660 aa8.17□□□□□ -1.1
Trim8-201ENSMUST00000026008 Gm17416Q30KP4 66 aa8.16□□□□□ -1.1
Trim8-201ENSMUST00000026008 PcloQ9QYX7 5068 aa8.13□□□□□ -1.11
Trim8-201ENSMUST00000026008 Ndufaf8A2AMZ4 74 aa8.08□□□□□ -1.12
Trim8-201ENSMUST00000026008 2210017I01RikA0A0A6YVV1 95 aa8.05□□□□□ -1.12
Trim8-201ENSMUST00000026008 2310057N15RikQ9D6T8 200 aa8.04□□□□□ -1.12
Trim8-201ENSMUST00000026008 Dnhd1D3Z2X2 4750 aa8.03□□□□□ -1.12
Trim8-201ENSMUST00000026008 Birc6O88738 4882 aa8.01□□□□□ -1.13
Trim8-201ENSMUST00000026008 Sec61bQ9CQS8 96 aaKnown RBP8□□□□□ -1.13
Trim8-201ENSMUST00000026008 Gm19426M0QWC7 77 aa7.96□□□□□ -1.13
Trim8-201ENSMUST00000026008 B930094E09RikQ8C4T2 136 aa7.92□□□□□ -1.14
Trim8-201ENSMUST00000026008 Krtap13-1Q8K198 168 aa7.92□□□□□ -1.14
Trim8-201ENSMUST00000026008 BC029722A0A0N4SW31 51 aa7.91□□□□□ -1.14
Trim8-201ENSMUST00000026008 Gm10318A0A1W2P728 225 aa7.83□□□□□ -1.16
Trim8-201ENSMUST00000026008 Crct1Q6PAI5 102 aa7.76□□□□□ -1.17
Trim8-201ENSMUST00000026008 Herc1E9PZP8 4859 aa7.76□□□□□ -1.17
Trim8-201ENSMUST00000026008 Gm19402J3QJV4 266 aa7.72□□□□□ -1.17
Trim8-201ENSMUST00000026008 Gm9112A2AI92 75 aa7.64□□□□□ -1.19
Trim8-201ENSMUST00000026008 Spink7Q6IE32 76 aa7.64□□□□□ -1.19
Trim8-201ENSMUST00000026008 Krtap1-5A2A590 122 aa7.6□□□□□ -1.19
Trim8-201ENSMUST00000026008 Krtap7-1Q9D3I6 87 aa7.58□□□□□ -1.2
Trim8-201ENSMUST00000026008 Gm17402F6Z0L5 76 aa7.54□□□□□ -1.2
Trim8-201ENSMUST00000026008 Ubr4A2AN08 5180 aa7.51□□□□□ -1.21
Trim8-201ENSMUST00000026008 Fam229aB2KGE5 128 aa7.5□□□□□ -1.21
Trim8-201ENSMUST00000026008 Krtap16-3Q8C1I6 86 aa7.47□□□□□ -1.21
Trim8-201ENSMUST00000026008 Gm19668J3QMD1 248 aa7.44□□□□□ -1.22
Trim8-201ENSMUST00000026008 Sprr2a3Q4KL71 83 aa7.44□□□□□ -1.22
Trim8-201ENSMUST00000026008 Sprr2a1Q9CQK8 83 aa7.44□□□□□ -1.22
Trim8-201ENSMUST00000026008 ZanO88799 5376 aa7.39□□□□□ -1.23
Trim8-201ENSMUST00000026008 Ush2AQ2QI47 5193 aa7.36□□□□□ -1.23
Trim8-201ENSMUST00000026008 Fat4Q2PZL6 4981 aa7.32□□□□□ -1.24
Trim8-201ENSMUST00000026008 Krtap19-1Q925H2 87 aa7.31□□□□□ -1.24
Trim8-201ENSMUST00000026008 Krtap19-3Q925H6 87 aa7.29□□□□□ -1.24
Trim8-201ENSMUST00000026008 Gm40193A0A1B0GT39 78 aa7.29□□□□□ -1.24
Trim8-201ENSMUST00000026008 Camk2n1Q6QWF9 78 aa7.28□□□□□ -1.24
Trim8-201ENSMUST00000026008 Lce1mQ9CR91 182 aa7.27□□□□□ -1.24
Trim8-201ENSMUST00000026008 Hmcn2A2AJ76 5100 aa7.25□□□□□ -1.25
Trim8-201ENSMUST00000026008 4932415D10RikA0A1W2P6U8 4986 aa7.23□□□□□ -1.25
Trim8-201ENSMUST00000026008 Krtap1-4Q3V2D6 188 aa7.18□□□□□ -1.26
Trim8-201ENSMUST00000026008 Gm18596A0A1W2P860 280 aa7.1□□□□□ -1.27
Trim8-201ENSMUST00000026008 LorP18165 486 aa7.09□□□□□ -1.27
Trim8-201ENSMUST00000026008 Krtap1-3A2A588 173 aa7.07□□□□□ -1.28
Trim8-201ENSMUST00000026008 Rnf213E9Q555 5152 aaKnown RBP7.07□□□□□ -1.28
Trim8-201ENSMUST00000026008 Lce1jD3YUU5 139 aa7□□□□□ -1.29
Trim8-201ENSMUST00000026008 Krtap12-1Q9Z287 130 aa6.85□□□□□ -1.31
Trim8-201ENSMUST00000026008 Gm9789Q8BIG3 52 aa6.83□□□□□ -1.32
Trim8-201ENSMUST00000026008 Krtap17-1A2A5X6 109 aa6.82□□□□□ -1.32
Trim8-201ENSMUST00000026008 Krtap19-9aF8WH65 55 aa6.81□□□□□ -1.32
Trim8-201ENSMUST00000026008 Tnp1P10856 55 aa6.79□□□□□ -1.32
Trim8-201ENSMUST00000026008 Gm7735D3YX18 52 aa6.72□□□□□ -1.33
Trim8-201ENSMUST00000026008 Prm1P02319 51 aa6.68□□□□□ -1.34
Trim8-201ENSMUST00000026008 Lce1iQ9D6P5 149 aa6.53□□□□□ -1.36
Trim8-201ENSMUST00000026008 Krtap8-1O08633 61 aa6.51□□□□□ -1.37
Trim8-201ENSMUST00000026008 Krtap9-5A2A5X3 358 aa6.5□□□□□ -1.37
Trim8-201ENSMUST00000026008 Lce1a2Q9D1K4 149 aa6.49□□□□□ -1.37
Trim8-201ENSMUST00000026008 Krtap19-2Q925I0 141 aa6.46□□□□□ -1.38
Trim8-201ENSMUST00000026008 SspoQ8CG65 4998 aa6.44□□□□□ -1.38
Trim8-201ENSMUST00000026008 Krtap19-9bQ99NG9 58 aa6.44□□□□□ -1.38
Trim8-201ENSMUST00000026008 Krtap9-3Q3V2C1 136 aa6.39□□□□□ -1.39
Trim8-201ENSMUST00000026008 Krtap31-2Q8CAY5 177 aa6.38□□□□□ -1.39
Trim8-201ENSMUST00000026008 Krtap31-1Q9D644 177 aa6.36□□□□□ -1.39
Trim8-201ENSMUST00000026008 2310046K23RikA0A0A6YVW6 87 aa6.32□□□□□ -1.4
Trim8-201ENSMUST00000026008 Lce1hQ9D6R3 140 aa6.27□□□□□ -1.41
Trim8-201ENSMUST00000026008 Gm10061D3Z714 54 aa6.25□□□□□ -1.41
Trim8-201ENSMUST00000026008 Mdn1A2ANY6 5589 aaKnown RBP6.19□□□□□ -1.42
Trim8-201ENSMUST00000026008 Muc5bE9Q5I3 4800 aa6.11□□□□□ -1.43
Trim8-201ENSMUST00000026008 Gm6358A0A087WPH4 74 aa6.08□□□□□ -1.44
Trim8-201ENSMUST00000026008 Mt2P02798 61 aa6.08□□□□□ -1.44
Trim8-201ENSMUST00000026008 A0A1Y7VJH8 109 aa6.05□□□□□ -1.44
Trim8-201ENSMUST00000026008 Krtap28-10A0A1Y7VP58 119 aa5.97□□□□□ -1.45
Trim8-201ENSMUST00000026008 Lce1dQ9D731 133 aa5.95□□□□□ -1.46
Trim8-201ENSMUST00000026008 Gm11569B1AQB1 180 aa5.92□□□□□ -1.46
Trim8-201ENSMUST00000026008 Krtap4-1Q3UUY3 169 aa5.8□□□□□ -1.48
Trim8-201ENSMUST00000026008 Gm10272F7CZ33 110 aa5.74□□□□□ -1.49
Trim8-201ENSMUST00000026008 Lce1eQ9D139 143 aa5.73□□□□□ -1.49
Trim8-201ENSMUST00000026008 A030005L19RikA0A1Y7VIU2 113 aa5.72□□□□□ -1.49
Trim8-201ENSMUST00000026008 Sprr2gO70558 76 aa5.68□□□□□ -1.5
Trim8-201ENSMUST00000026008 Krtap22-2J3QNX6 67 aa5.67□□□□□ -1.5
Trim8-201ENSMUST00000026008 4933428G20RikQ9D3X4 101 aa5.63□□□□□ -1.51
Trim8-201ENSMUST00000026008 Gm11938Q9D3H4 131 aa5.62□□□□□ -1.51
Trim8-201ENSMUST00000026008 A0A1Y7VLE6 161 aa5.61□□□□□ -1.51
Trim8-201ENSMUST00000026008 Sprr2dO70555 85 aa5.52□□□□□ -1.53
Trim8-201ENSMUST00000026008 Krtap28-13A0A087WQP5 138 aa5.52□□□□□ -1.53
Trim8-201ENSMUST00000026008 Gm7544A0A1Y7VJ58 118 aa5.51□□□□□ -1.53
Trim8-201ENSMUST00000026008 Lce1cQ9D1C5 147 aa5.5□□□□□ -1.53
Trim8-201ENSMUST00000026008 Krtap4-6Q3V4B7 195 aa5.49□□□□□ -1.53
Trim8-201ENSMUST00000026008 Lce1bQ9D149 137 aa5.49□□□□□ -1.53
Trim8-201ENSMUST00000026008 A030005K14RikA0A1Y7VNY1 122 aa5.48□□□□□ -1.53
Trim8-201ENSMUST00000026008 Gm11563B1AQ90 168 aa5.45□□□□□ -1.54
Trim8-201ENSMUST00000026008 Krtap4-7Q9D732 168 aa5.45□□□□□ -1.54
Trim8-201ENSMUST00000026008 Fsip2A2ARZ3 6995 aa5.45□□□□□ -1.54
Trim8-201ENSMUST00000026008 Syne1Q6ZWR6 8799 aa5.42□□□□□ -1.54
Trim8-201ENSMUST00000026008 Gm11562A0PK51 136 aa5.33□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 82.2 ms