RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 2210017I01RikA0A0A6YVV1 95 aa7.49□□□□□ -1.21
Nkx3-1-201ENSMUST00000022646 Kiaa1109A2AAE1 5005 aa7.45□□□□□ -1.22
Nkx3-1-201ENSMUST00000022646 Romo1P60603 79 aa7.42□□□□□ -1.22
Nkx3-1-201ENSMUST00000022646 Herc2Q4U2R1 4836 aa7.4□□□□□ -1.22
Nkx3-1-201ENSMUST00000022646 HydinQ80W93 5154 aa7.38□□□□□ -1.23
Nkx3-1-201ENSMUST00000022646 Dnhd1D3Z2X2 4750 aa7.35□□□□□ -1.23
Nkx3-1-201ENSMUST00000022646 2310057N15RikQ9D6T8 200 aa7.32□□□□□ -1.24
Nkx3-1-201ENSMUST00000022646 Krtap13-1Q8K198 168 aa7.32□□□□□ -1.24
Nkx3-1-201ENSMUST00000022646 Lrp2A2ARV4 4660 aa7.29□□□□□ -1.24
Nkx3-1-201ENSMUST00000022646 Birc6O88738 4882 aa7.27□□□□□ -1.25
Nkx3-1-201ENSMUST00000022646 BC029722A0A0N4SW31 51 aa7.26□□□□□ -1.25
Nkx3-1-201ENSMUST00000022646 Gm21887J3QQ04 176 aa7.24□□□□□ -1.25
Nkx3-1-201ENSMUST00000022646 B930094E09RikQ8C4T2 136 aa7.23□□□□□ -1.25
Nkx3-1-201ENSMUST00000022646 Gm19426M0QWC7 77 aa7.21□□□□□ -1.25
Nkx3-1-201ENSMUST00000022646 Sec61bQ9CQS8 96 aaKnown RBP7.18□□□□□ -1.26
Nkx3-1-201ENSMUST00000022646 Krtap1-5A2A590 122 aa7.12□□□□□ -1.27
Nkx3-1-201ENSMUST00000022646 PcloQ9QYX7 5068 aa7.1□□□□□ -1.27
Nkx3-1-201ENSMUST00000022646 Gm17402F6Z0L5 76 aa7.03□□□□□ -1.28
Nkx3-1-201ENSMUST00000022646 Gm10318A0A1W2P728 225 aa7.02□□□□□ -1.29
Nkx3-1-201ENSMUST00000022646 Mp68P56379 58 aa7.02□□□□□ -1.29
Nkx3-1-201ENSMUST00000022646 Gm19402J3QJV4 266 aa7□□□□□ -1.29
Nkx3-1-201ENSMUST00000022646 Crct1Q6PAI5 102 aa7□□□□□ -1.29
Nkx3-1-201ENSMUST00000022646 Krtap16-3Q8C1I6 86 aa6.98□□□□□ -1.29
Nkx3-1-201ENSMUST00000022646 Fam229aB2KGE5 128 aa6.97□□□□□ -1.29
Nkx3-1-201ENSMUST00000022646 Gm20538F6Z9R1 75 aa6.94□□□□□ -1.3
Nkx3-1-201ENSMUST00000022646 Spink7Q6IE32 76 aa6.92□□□□□ -1.3
Nkx3-1-201ENSMUST00000022646 Sprr2a3Q4KL71 83 aa6.89□□□□□ -1.31
Nkx3-1-201ENSMUST00000022646 Sprr2a1Q9CQK8 83 aa6.89□□□□□ -1.31
Nkx3-1-201ENSMUST00000022646 Krtap19-1Q925H2 87 aa6.87□□□□□ -1.31
Nkx3-1-201ENSMUST00000022646 Krtap7-1Q9D3I6 87 aa6.85□□□□□ -1.31
Nkx3-1-201ENSMUST00000022646 Krtap19-3Q925H6 87 aa6.82□□□□□ -1.32
Nkx3-1-201ENSMUST00000022646 Herc1E9PZP8 4859 aa6.78□□□□□ -1.32
Nkx3-1-201ENSMUST00000022646 Krtap1-4Q3V2D6 188 aa6.69□□□□□ -1.34
Nkx3-1-201ENSMUST00000022646 Gm40193A0A1B0GT39 78 aa6.66□□□□□ -1.34
Nkx3-1-201ENSMUST00000022646 ZanO88799 5376 aa6.65□□□□□ -1.34
Nkx3-1-201ENSMUST00000022646 Camk2n1Q6QWF9 78 aa6.6□□□□□ -1.35
Nkx3-1-201ENSMUST00000022646 4932415D10RikA0A1W2P6U8 4986 aa6.6□□□□□ -1.35
Nkx3-1-201ENSMUST00000022646 Gm19668J3QMD1 248 aa6.59□□□□□ -1.36
Nkx3-1-201ENSMUST00000022646 Ndufaf8A2AMZ4 74 aa6.57□□□□□ -1.36
Nkx3-1-201ENSMUST00000022646 Ubr4A2AN08 5180 aa6.56□□□□□ -1.36
Nkx3-1-201ENSMUST00000022646 Lce1mQ9CR91 182 aa6.55□□□□□ -1.36
Nkx3-1-201ENSMUST00000022646 Ush2AQ2QI47 5193 aa6.54□□□□□ -1.36
Nkx3-1-201ENSMUST00000022646 Hmcn2A2AJ76 5100 aa6.52□□□□□ -1.37
Nkx3-1-201ENSMUST00000022646 Fat4Q2PZL6 4981 aa6.5□□□□□ -1.37
Nkx3-1-201ENSMUST00000022646 Krtap1-3A2A588 173 aa6.5□□□□□ -1.37
Nkx3-1-201ENSMUST00000022646 Lce1jD3YUU5 139 aa6.47□□□□□ -1.37
Nkx3-1-201ENSMUST00000022646 Prm2P07978 107 aa6.43□□□□□ -1.38
Nkx3-1-201ENSMUST00000022646 LorP18165 486 aa6.4□□□□□ -1.38
Nkx3-1-201ENSMUST00000022646 Krtap12-1Q9Z287 130 aa6.38□□□□□ -1.39
Nkx3-1-201ENSMUST00000022646 Krtap19-9aF8WH65 55 aa6.35□□□□□ -1.39
Nkx3-1-201ENSMUST00000022646 Gm9789Q8BIG3 52 aa6.26□□□□□ -1.41
Nkx3-1-201ENSMUST00000022646 Rnf213E9Q555 5152 aaKnown RBP6.25□□□□□ -1.41
Nkx3-1-201ENSMUST00000022646 Gm18596A0A1W2P860 280 aa6.24□□□□□ -1.41
Nkx3-1-201ENSMUST00000022646 Krtap17-1A2A5X6 109 aa6.19□□□□□ -1.42
Nkx3-1-201ENSMUST00000022646 Tnp1P10856 55 aa6.17□□□□□ -1.42
Nkx3-1-201ENSMUST00000022646 Prm1P02319 51 aa6.12□□□□□ -1.43
Nkx3-1-201ENSMUST00000022646 Gm7735D3YX18 52 aa6.1□□□□□ -1.43
Nkx3-1-201ENSMUST00000022646 Krtap8-1O08633 61 aa6.06□□□□□ -1.44
Nkx3-1-201ENSMUST00000022646 Lce1iQ9D6P5 149 aa6.06□□□□□ -1.44
Nkx3-1-201ENSMUST00000022646 Krtap19-2Q925I0 141 aa6.04□□□□□ -1.44
Nkx3-1-201ENSMUST00000022646 Lce1a2Q9D1K4 149 aa6.02□□□□□ -1.45
Nkx3-1-201ENSMUST00000022646 Krtap9-5A2A5X3 358 aa6□□□□□ -1.45
Nkx3-1-201ENSMUST00000022646 SspoQ8CG65 4998 aa5.97□□□□□ -1.45
Nkx3-1-201ENSMUST00000022646 Krtap19-9bQ99NG9 58 aa5.97□□□□□ -1.45
Nkx3-1-201ENSMUST00000022646 Gm9112A2AI92 75 aa5.88□□□□□ -1.47
Nkx3-1-201ENSMUST00000022646 2310046K23RikA0A0A6YVW6 87 aa5.84□□□□□ -1.47
Nkx3-1-201ENSMUST00000022646 Krtap9-3Q3V2C1 136 aa5.82□□□□□ -1.48
Nkx3-1-201ENSMUST00000022646 Lce1hQ9D6R3 140 aa5.74□□□□□ -1.49
Nkx3-1-201ENSMUST00000022646 Gm10061D3Z714 54 aa5.69□□□□□ -1.5
Nkx3-1-201ENSMUST00000022646 Gm6358A0A087WPH4 74 aa5.65□□□□□ -1.5
Nkx3-1-201ENSMUST00000022646 Mt2P02798 61 aa5.65□□□□□ -1.5
Nkx3-1-201ENSMUST00000022646 Muc5bE9Q5I3 4800 aa5.61□□□□□ -1.51
Nkx3-1-201ENSMUST00000022646 Krtap4-1Q3UUY3 169 aa5.55□□□□□ -1.52
Nkx3-1-201ENSMUST00000022646 Lce1dQ9D731 133 aa5.37□□□□□ -1.55
Nkx3-1-201ENSMUST00000022646 Krtap22-2J3QNX6 67 aa5.3□□□□□ -1.56
Nkx3-1-201ENSMUST00000022646 Gm11569B1AQB1 180 aa5.29□□□□□ -1.56
Nkx3-1-201ENSMUST00000022646 Sprr2gO70558 76 aa5.24□□□□□ -1.57
Nkx3-1-201ENSMUST00000022646 Gm10272F7CZ33 110 aa5.23□□□□□ -1.57
Nkx3-1-201ENSMUST00000022646 Mdn1A2ANY6 5589 aaKnown RBP5.2□□□□□ -1.58
Nkx3-1-201ENSMUST00000022646 Lce1eQ9D139 143 aa5.19□□□□□ -1.58
Nkx3-1-201ENSMUST00000022646 Gm11563B1AQ90 168 aa5.17□□□□□ -1.58
Nkx3-1-201ENSMUST00000022646 Krtap4-7Q9D732 168 aa5.17□□□□□ -1.58
Nkx3-1-201ENSMUST00000022646 Gm11938Q9D3H4 131 aa5.14□□□□□ -1.59
Nkx3-1-201ENSMUST00000022646 Sprr2dO70555 85 aa5.13□□□□□ -1.59
Nkx3-1-201ENSMUST00000022646 4933428G20RikQ9D3X4 101 aa5.12□□□□□ -1.59
Nkx3-1-201ENSMUST00000022646 Gm11555B1AQ89 175 aa5.08□□□□□ -1.6
Nkx3-1-201ENSMUST00000022646 Gm11562A0PK51 136 aa5□□□□□ -1.61
Nkx3-1-201ENSMUST00000022646 Lce1cQ9D1C5 147 aa4.98□□□□□ -1.61
Nkx3-1-201ENSMUST00000022646 Syne1Q6ZWR6 8799 aa4.83□□□□□ -1.64
Nkx3-1-201ENSMUST00000022646 Krtap4-6Q3V4B7 195 aa4.82□□□□□ -1.64
Nkx3-1-201ENSMUST00000022646 Krtap19-4Q925H7 84 aa4.81□□□□□ -1.64
Nkx3-1-201ENSMUST00000022646 Lce3bQ9CQM7 98 aa4.81□□□□□ -1.64
Nkx3-1-201ENSMUST00000022646 Gm10100J3QK64 120 aa4.8□□□□□ -1.64
Nkx3-1-201ENSMUST00000022646 Lce1fB9EJP6 147 aa4.78□□□□□ -1.64
Nkx3-1-201ENSMUST00000022646 Lce1a1Q9CQH5 143 aa4.78□□□□□ -1.64
Nkx3-1-201ENSMUST00000022646 Krtap4-2B1AQ85 167 aa4.69□□□□□ -1.66
Nkx3-1-201ENSMUST00000022646 Gm10142J3KMP7 120 aa4.69□□□□□ -1.66
Nkx3-1-201ENSMUST00000022646 Lce1gQ9D195 139 aa4.6□□□□□ -1.67
Nkx3-1-201ENSMUST00000022646 A0A1Y7VJH8 109 aa4.59□□□□□ -1.67
Nkx3-1-201ENSMUST00000022646 Lce3cQ91V05 98 aa4.59□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms