RNA–Protein interactions for RNA: ENSMUST00000001412.16

Vps50-201, Transcript of Syndetin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps50, Length 3,788 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50-201ENSMUST00000001412 Ush2AQ2QI47 5193 aa3.4□□□□□ -1.86
Vps50-201ENSMUST00000001412 Prm2P07978 107 aa3.4□□□□□ -1.86
Vps50-201ENSMUST00000001412 A0A1Y7VJH8 109 aa3.37□□□□□ -1.87
Vps50-201ENSMUST00000001412 Defb1P56386 69 aa3.37□□□□□ -1.87
Vps50-201ENSMUST00000001412 Defb13Q8R2I4 64 aa3.37□□□□□ -1.87
Vps50-201ENSMUST00000001412 Gm3880A0A1B0GSB3 72 aa3.36□□□□□ -1.87
Vps50-201ENSMUST00000001412 Ubr4A2AN08 5180 aa3.36□□□□□ -1.87
Vps50-201ENSMUST00000001412 Gm5767A0A0J9YTU8 78 aa3.34□□□□□ -1.87
Vps50-201ENSMUST00000001412 4930507D05RikQ8C9C9 103 aa3.34□□□□□ -1.88
Vps50-201ENSMUST00000001412 ZanO88799 5376 aa3.33□□□□□ -1.88
Vps50-201ENSMUST00000001412 Krtap4-2B1AQ85 167 aa3.33□□□□□ -1.88
Vps50-201ENSMUST00000001412 Cox6b2Q80ZN9 88 aa3.33□□□□□ -1.88
Vps50-201ENSMUST00000001412 Lce1mQ9CR91 182 aa3.32□□□□□ -1.88
Vps50-201ENSMUST00000001412 4932415D10RikA0A1W2P6U8 4986 aa3.32□□□□□ -1.88
Vps50-201ENSMUST00000001412 Gm4491E0CX42 125 aa3.32□□□□□ -1.88
Vps50-201ENSMUST00000001412 Rpl37Q9D823 97 aa3.28□□□□□ -1.88
Vps50-201ENSMUST00000001412 Fat4Q2PZL6 4981 aa3.26□□□□□ -1.89
Vps50-201ENSMUST00000001412 CriptO70333 101 aa3.25□□□□□ -1.89
Vps50-201ENSMUST00000001412 Krtap15-1Q9QZU5 150 aa3.25□□□□□ -1.89
Vps50-201ENSMUST00000001412 Krtap28-10A0A1Y7VP58 119 aa3.25□□□□□ -1.89
Vps50-201ENSMUST00000001412 Krtap16-3Q8C1I6 86 aa3.24□□□□□ -1.89
Vps50-201ENSMUST00000001412 Gm9955Q8CEJ8 102 aa3.24□□□□□ -1.89
Vps50-201ENSMUST00000001412 Ndufaf8A2AMZ4 74 aa3.23□□□□□ -1.89
Vps50-201ENSMUST00000001412 Gm17416Q30KP4 66 aa3.23□□□□□ -1.89
Vps50-201ENSMUST00000001412 Krtap7-1Q9D3I6 87 aa3.22□□□□□ -1.89
Vps50-201ENSMUST00000001412 Krtap3-1A2A591 98 aa3.21□□□□□ -1.9
Vps50-201ENSMUST00000001412 Gm10382Q3V0T5 144 aa3.19□□□□□ -1.9
Vps50-201ENSMUST00000001412 Krtap19-1Q925H2 87 aa3.19□□□□□ -1.9
Vps50-201ENSMUST00000001412 Rnf213E9Q555 5152 aaKnown RBP3.18□□□□□ -1.9
Vps50-201ENSMUST00000001412 B930094E09RikQ8C4T2 136 aa3.17□□□□□ -1.9
Vps50-201ENSMUST00000001412 Krtap19-3Q925H6 87 aa3.17□□□□□ -1.9
Vps50-201ENSMUST00000001412 Krtap1-3A2A588 173 aa3.17□□□□□ -1.9
Vps50-201ENSMUST00000001412 Gm9789Q8BIG3 52 aa3.16□□□□□ -1.9
Vps50-201ENSMUST00000001412 2310057N15RikQ9D6T8 200 aa3.16□□□□□ -1.9
Vps50-201ENSMUST00000001412 Gm21887J3QQ04 176 aa3.15□□□□□ -1.9
Vps50-201ENSMUST00000001412 2210017I01RikA0A0A6YVV1 95 aa3.14□□□□□ -1.91
Vps50-201ENSMUST00000001412 Rnase13Q5GAM7 153 aa3.14□□□□□ -1.91
Vps50-201ENSMUST00000001412 Krtap13-1Q8K198 168 aa3.14□□□□□ -1.91
Vps50-201ENSMUST00000001412 Crct1Q6PAI5 102 aa3.13□□□□□ -1.91
Vps50-201ENSMUST00000001412 Gm18596A0A1W2P860 280 aa3.12□□□□□ -1.91
Vps50-201ENSMUST00000001412 Krtap28-13A0A087WQP5 138 aa3.12□□□□□ -1.91
Vps50-201ENSMUST00000001412 A0A1Y7VLE6 161 aa3.12□□□□□ -1.91
Vps50-201ENSMUST00000001412 Krtap1-5A2A590 122 aa3.12□□□□□ -1.91
Vps50-201ENSMUST00000001412 Gm10318A0A1W2P728 225 aa3.1□□□□□ -1.91
Vps50-201ENSMUST00000001412 Gm7735D3YX18 52 aa3.08□□□□□ -1.92
Vps50-201ENSMUST00000001412 Prm1P02319 51 aa3.07□□□□□ -1.92
Vps50-201ENSMUST00000001412 Gm40193A0A1B0GT39 78 aa3.06□□□□□ -1.92
Vps50-201ENSMUST00000001412 Gm19668J3QMD1 248 aa3.06□□□□□ -1.92
Vps50-201ENSMUST00000001412 A030005L19RikA0A1Y7VIU2 113 aa3.05□□□□□ -1.92
Vps50-201ENSMUST00000001412 Gm19402J3QJV4 266 aa3.05□□□□□ -1.92
Vps50-201ENSMUST00000001412 SspoQ8CG65 4998 aa3.04□□□□□ -1.92
Vps50-201ENSMUST00000001412 Fam229aB2KGE5 128 aa3.02□□□□□ -1.93
Vps50-201ENSMUST00000001412 Krtap1-4Q3V2D6 188 aa3.02□□□□□ -1.93
Vps50-201ENSMUST00000001412 Gm19426M0QWC7 77 aa3.01□□□□□ -1.93
Vps50-201ENSMUST00000001412 Sec61bQ9CQS8 96 aaKnown RBP3.01□□□□□ -1.93
Vps50-201ENSMUST00000001412 A030005K14RikA0A1Y7VNY1 122 aa3□□□□□ -1.93
Vps50-201ENSMUST00000001412 Gm17606F6ZL36 78 aa3□□□□□ -1.93
Vps50-201ENSMUST00000001412 Gm7544A0A1Y7VJ58 118 aa2.99□□□□□ -1.93
Vps50-201ENSMUST00000001412 Gm9112A2AI92 75 aa2.99□□□□□ -1.93
Vps50-201ENSMUST00000001412 LorP18165 486 aa2.98□□□□□ -1.93
Vps50-201ENSMUST00000001412 Lce1jD3YUU5 139 aa2.97□□□□□ -1.93
Vps50-201ENSMUST00000001412 Gm17402F6Z0L5 76 aa2.97□□□□□ -1.93
Vps50-201ENSMUST00000001412 Krtap17-1A2A5X6 109 aa2.96□□□□□ -1.94
Vps50-201ENSMUST00000001412 A0A1Y7VJ07 166 aa2.88□□□□□ -1.95
Vps50-201ENSMUST00000001412 Sprr2a3Q4KL71 83 aa2.88□□□□□ -1.95
Vps50-201ENSMUST00000001412 Sprr2a1Q9CQK8 83 aa2.88□□□□□ -1.95
Vps50-201ENSMUST00000001412 BC029722A0A0N4SW31 51 aa2.85□□□□□ -1.95
Vps50-201ENSMUST00000001412 Krtap12-1Q9Z287 130 aa2.82□□□□□ -1.96
Vps50-201ENSMUST00000001412 A030014E15RikA0A1Y7VJV2 120 aa2.81□□□□□ -1.96
Vps50-201ENSMUST00000001412 Gm10061D3Z714 54 aa2.8□□□□□ -1.96
Vps50-201ENSMUST00000001412 Lce1iQ9D6P5 149 aa2.8□□□□□ -1.96
Vps50-201ENSMUST00000001412 Krtap19-2Q925I0 141 aa2.79□□□□□ -1.96
Vps50-201ENSMUST00000001412 Lce1a2Q9D1K4 149 aa2.77□□□□□ -1.97
Vps50-201ENSMUST00000001412 Muc5bE9Q5I3 4800 aa2.76□□□□□ -1.97
Vps50-201ENSMUST00000001412 Krtap19-9aF8WH65 55 aa2.76□□□□□ -1.97
Vps50-201ENSMUST00000001412 A030003K21RikA0A1Y7VIM3 128 aa2.75□□□□□ -1.97
Vps50-201ENSMUST00000001412 Krtap9-5A2A5X3 358 aa2.74□□□□□ -1.97
Vps50-201ENSMUST00000001412 Gm11562A0PK51 136 aa2.66□□□□□ -1.98
Vps50-201ENSMUST00000001412 Camk2n1Q6QWF9 78 aa2.66□□□□□ -1.98
Vps50-201ENSMUST00000001412 Spink7Q6IE32 76 aa2.65□□□□□ -1.99
Vps50-201ENSMUST00000001412 Gm6358A0A087WPH4 74 aa2.64□□□□□ -1.99
Vps50-201ENSMUST00000001412 2310046K23RikA0A0A6YVW6 87 aa2.64□□□□□ -1.99
Vps50-201ENSMUST00000001412 Gm11569B1AQB1 180 aa2.64□□□□□ -1.99
Vps50-201ENSMUST00000001412 Gm6217A0A1Y7VJK9 128 aa2.59□□□□□ -1.99
Vps50-201ENSMUST00000001412 A0A286YCP9 139 aa2.58□□□□□ -2
Vps50-201ENSMUST00000001412 Tnp1P10856 55 aa2.58□□□□□ -2
Vps50-201ENSMUST00000001412 Krtap8-1O08633 61 aa2.57□□□□□ -2
Vps50-201ENSMUST00000001412 Krtap9-3Q3V2C1 136 aa2.57□□□□□ -2
Vps50-201ENSMUST00000001412 Mt2P02798 61 aa2.53□□□□□ -2
Vps50-201ENSMUST00000001412 Lce1hQ9D6R3 140 aa2.52□□□□□ -2.01
Vps50-201ENSMUST00000001412 Krtap19-9bQ99NG9 58 aa2.48□□□□□ -2.01
Vps50-201ENSMUST00000001412 Mdn1A2ANY6 5589 aaKnown RBP2.43□□□□□ -2.02
Vps50-201ENSMUST00000001412 Lce1gQ9D195 139 aa2.42□□□□□ -2.02
Vps50-201ENSMUST00000001412 Lce1dQ9D731 133 aa2.42□□□□□ -2.02
Vps50-201ENSMUST00000001412 Krtap4-6Q3V4B7 195 aa2.4□□□□□ -2.03
Vps50-201ENSMUST00000001412 Lce1a1Q9CQH5 143 aa2.4□□□□□ -2.03
Vps50-201ENSMUST00000001412 Syne2Q6ZWQ0 6874 aaKnown RBP2.39□□□□□ -2.03
Vps50-201ENSMUST00000001412 Krtap22-2J3QNX6 67 aa2.35□□□□□ -2.03
Vps50-201ENSMUST00000001412 Lce1lQ9D1G7 135 aa2.34□□□□□ -2.03
Vps50-201ENSMUST00000001412 Sprr2gO70558 76 aa2.33□□□□□ -2.04
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms