RNA–Protein interactions for RNA: ENSMUST00000001412.16

Vps50-201, Transcript of Syndetin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps50, Length 3,788 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50-201ENSMUST00000001412 Gm35339A0A140LHH9 1649 aa13.91□□□□□ -0.18
Vps50-201ENSMUST00000001412 NischQ80TM9 1593 aa13.69□□□□□ -0.22
Vps50-201ENSMUST00000001412 Abcc9P70170 1546 aa13.37□□□□□ -0.27
Vps50-201ENSMUST00000001412 Abcc8B2RUS7 1588 aa13.17□□□□□ -0.3
Vps50-201ENSMUST00000001412 ScribQ80U72 1612 aa12.57□□□□□ -0.4
Vps50-201ENSMUST00000001412 Dcaf1Q80TR8 1506 aa12.23□□□□□ -0.45
Vps50-201ENSMUST00000001412 Kdm5dQ62240 1548 aa12.11□□□□□ -0.47
Vps50-201ENSMUST00000001412 Ccdc180J3QNE4 1664 aa12.04□□□□□ -0.48
Vps50-201ENSMUST00000001412 Rb1cc1Q9ESK9 1588 aa11.96□□□□□ -0.49
Vps50-201ENSMUST00000001412 NacadQ5SWP3 1504 aa11.96□□□□□ -0.5
Vps50-201ENSMUST00000001412 Rtl1Q7M732 1744 aa11.9□□□□□ -0.51
Vps50-201ENSMUST00000001412 Baz1aO88379 1555 aa11.83□□□□□ -0.52
Vps50-201ENSMUST00000001412 Rhox8Q6VSS7 320 aa11.82□□□□□ -0.52
Vps50-201ENSMUST00000001412 Sycp2Q9CUU3 1500 aa11.78□□□□□ -0.52
Vps50-201ENSMUST00000001412 Zcchc6Q5BLK4 1491 aaKnown RBP11.73□□□□□ -0.53
Vps50-201ENSMUST00000001412 Crybg2B7ZCC2 1516 aa11.72□□□□□ -0.53
Vps50-201ENSMUST00000001412 BicraF8VPZ9 1578 aa11.7□□□□□ -0.54
Vps50-201ENSMUST00000001412 Smarca2Q6DIC0 1577 aa11.61□□□□□ -0.55
Vps50-201ENSMUST00000001412 Cecr2E9Q2Z1 1453 aa11.37□□□□□ -0.59
Vps50-201ENSMUST00000001412 Synj1Q8CHC4 1574 aa11.21□□□□□ -0.61
Vps50-201ENSMUST00000001412 Smarca4Q3TKT4 1613 aaKnown RBP11.17□□□□□ -0.62
Vps50-201ENSMUST00000001412 Ccdc136Q3TVA9 1136 aa11.14□□□□□ -0.63
Vps50-201ENSMUST00000001412 Cttnbp2B9EJA2 1648 aa11.12□□□□□ -0.63
Vps50-201ENSMUST00000001412 CftrP26361 1476 aa11.11□□□□□ -0.63
Vps50-201ENSMUST00000001412 Top2bQ64511 1612 aa11.07□□□□□ -0.64
Vps50-201ENSMUST00000001412 Iqgap2Q3UQ44 1575 aa11.05□□□□□ -0.64
Vps50-201ENSMUST00000001412 Brd4Q9ESU6 1400 aaKnown RBP11.04□□□□□ -0.64
Vps50-201ENSMUST00000001412 Unc13aQ4KUS2 1712 aa11.04□□□□□ -0.64
Vps50-201ENSMUST00000001412 Atad2bE9Q166 1460 aaKnown RBP10.99□□□□□ -0.65
Vps50-201ENSMUST00000001412 Cc2d2aQ8CFW7 1633 aa10.93□□□□□ -0.66
Vps50-201ENSMUST00000001412 Thoc2B1AZI6 1594 aaKnown RBP10.93□□□□□ -0.66
Vps50-201ENSMUST00000001412 Wdr62Q3U3T8 1523 aa10.92□□□□□ -0.66
Vps50-201ENSMUST00000001412 Pds5bQ4VA53 1446 aaKnown RBP10.92□□□□□ -0.66
Vps50-201ENSMUST00000001412 Frmpd1A2AKB4 1549 aa10.89□□□□□ -0.67
Vps50-201ENSMUST00000001412 Golga3P55937 1487 aa10.89□□□□□ -0.67
Vps50-201ENSMUST00000001412 HrcG5E8J6 738 aa10.89□□□□□ -0.67
Vps50-201ENSMUST00000001412 Trim41Q5NCC3 630 aa10.89□□□□□ -0.67
Vps50-201ENSMUST00000001412 Rsf1E9PWW9 1441 aaKnown RBP10.87□□□□□ -0.67
Vps50-201ENSMUST00000001412 Rpgrip1Q9EPQ2 1331 aa10.87□□□□□ -0.67
Vps50-201ENSMUST00000001412 Ccdc88bQ4QRL3 1481 aa10.85□□□□□ -0.67
Vps50-201ENSMUST00000001412 TnnQ80Z71 1560 aa10.84□□□□□ -0.67
Vps50-201ENSMUST00000001412 Cep164Q5DU05 1446 aa10.76□□□□□ -0.69
Vps50-201ENSMUST00000001412 Chic1Q8CBW7 227 aa10.74□□□□□ -0.69
Vps50-201ENSMUST00000001412 Lamc3Q9R0B6 1581 aa10.73□□□□□ -0.69
Vps50-201ENSMUST00000001412 Top2aQ01320 1528 aaKnown RBP10.71□□□□□ -0.69
Vps50-201ENSMUST00000001412 Fam135aQ6NS59 1506 aa10.69□□□□□ -0.7
Vps50-201ENSMUST00000001412 Fmn1Q05860 1466 aa10.68□□□□□ -0.7
Vps50-201ENSMUST00000001412 Eif4g1Q6NZJ6 1600 aaKnown RBP10.65□□□□□ -0.7
Vps50-201ENSMUST00000001412 Ercc6F8VPZ5 1481 aa10.64□□□□□ -0.71
Vps50-201ENSMUST00000001412 Cngb1E1AZ71 1325 aa10.58□□□□□ -0.72
Vps50-201ENSMUST00000001412 Camsap1A2AHC3 1581 aa10.58□□□□□ -0.72
Vps50-201ENSMUST00000001412 Dnajc5bQ9CQ94 199 aa10.55□□□□□ -0.72
Vps50-201ENSMUST00000001412 Rapgef2Q8CHG7 1496 aa10.55□□□□□ -0.72
Vps50-201ENSMUST00000001412 Phldb1Q6PDH0 1371 aaKnown RBP10.53□□□□□ -0.72
Vps50-201ENSMUST00000001412 Esf1Q3V1V3 845 aaKnown RBP10.53□□□□□ -0.72
Vps50-201ENSMUST00000001412 PtprkP35822 1457 aa10.49□□□□□ -0.73
Vps50-201ENSMUST00000001412 Acin1Q9JIX8 1338 aaKnown RBP10.46□□□□□ -0.74
Vps50-201ENSMUST00000001412 NrkQ9R0G8 1455 aa10.44□□□□□ -0.74
Vps50-201ENSMUST00000001412 Grin2bQ01097 1482 aa10.43□□□□□ -0.74
Vps50-201ENSMUST00000001412 Kif15Q6P9L6 1387 aa10.43□□□□□ -0.74
Vps50-201ENSMUST00000001412 Kif21aQ9QXL2 1672 aa10.42□□□□□ -0.74
Vps50-201ENSMUST00000001412 Baz1bQ9Z277 1479 aa10.4□□□□□ -0.74
Vps50-201ENSMUST00000001412 Setd1bQ8CFT2 1985 aa10.4□□□□□ -0.74
Vps50-201ENSMUST00000001412 Arhgap35Q91YM2 1499 aa10.38□□□□□ -0.75
Vps50-201ENSMUST00000001412 Shroom4Q1W617 1475 aa10.37□□□□□ -0.75
Vps50-201ENSMUST00000001412 Cux2P70298 1426 aa10.37□□□□□ -0.75
Vps50-201ENSMUST00000001412 Cep162Q6ZQ06 1403 aa10.37□□□□□ -0.75
Vps50-201ENSMUST00000001412 Samd9lQ69Z37 1561 aa10.34□□□□□ -0.75
Vps50-201ENSMUST00000001412 Mrc2Q64449 1479 aa10.31□□□□□ -0.76
Vps50-201ENSMUST00000001412 Gab3Q8BSM5 595 aa10.3□□□□□ -0.76
Vps50-201ENSMUST00000001412 PogzQ8BZH4 1409 aaKnown RBP10.3□□□□□ -0.76
Vps50-201ENSMUST00000001412 Ccdc18Q640L5 1455 aa10.3□□□□□ -0.76
Vps50-201ENSMUST00000001412 Ubl4bQ9CQ84 188 aa10.29□□□□□ -0.76
Vps50-201ENSMUST00000001412 Mroh2bQ7M6Y6 1581 aa10.29□□□□□ -0.76
Vps50-201ENSMUST00000001412 Gpatch8A2A6A1 1505 aa10.29□□□□□ -0.76
Vps50-201ENSMUST00000001412 Pcgf6Q99NA9 353 aa10.28□□□□□ -0.76
Vps50-201ENSMUST00000001412 Duox2A2AQ99 1517 aa10.28□□□□□ -0.76
Vps50-201ENSMUST00000001412 Map3k1P53349 1493 aa10.28□□□□□ -0.76
Vps50-201ENSMUST00000001412 Erich3F6QRE9 1637 aa10.27□□□□□ -0.76
Vps50-201ENSMUST00000001412 LrpprcQ6PB66 1392 aaKnown RBP10.26□□□□□ -0.77
Vps50-201ENSMUST00000001412 Crocc2F6XLV1 1638 aa10.25□□□□□ -0.77
Vps50-201ENSMUST00000001412 Efcab5A0JP43 1406 aa10.24□□□□□ -0.77
Vps50-201ENSMUST00000001412 Lrriq1Q0P5X1 1673 aa10.23□□□□□ -0.77
Vps50-201ENSMUST00000001412 Lmo7E9PYF4 1699 aaKnown RBP10.23□□□□□ -0.77
Vps50-201ENSMUST00000001412 Ankrd26Q811D2 1581 aa10.23□□□□□ -0.77
Vps50-201ENSMUST00000001412 AqrQ8CFQ3 1481 aaKnown RBP10.22□□□□□ -0.77
Vps50-201ENSMUST00000001412 SynmQ70IV5 1561 aa10.21□□□□□ -0.78
Vps50-201ENSMUST00000001412 Magi3Q9EQJ9 1476 aa10.2□□□□□ -0.78
Vps50-201ENSMUST00000001412 Dhx29Q6PGC1 1365 aaKnown RBP10.18□□□□□ -0.78
Vps50-201ENSMUST00000001412 Urb2E9Q7L1 1524 aaKnown RBP10.18□□□□□ -0.78
Vps50-201ENSMUST00000001412 Arap1Q4LDD4 1452 aa10.18□□□□□ -0.78
Vps50-201ENSMUST00000001412 Ehmt2Q9Z148 1263 aaKnown RBP10.18□□□□□ -0.78
Vps50-201ENSMUST00000001412 Cux1P53564 1515 aa10.17□□□□□ -0.78
Vps50-201ENSMUST00000001412 Pla2r1Q62028 1487 aa10.16□□□□□ -0.78
Vps50-201ENSMUST00000001412 Arhgef5E9Q7D5 1581 aa10.14□□□□□ -0.79
Vps50-201ENSMUST00000001412 Disp1Q3TDN0 1521 aa10.14□□□□□ -0.79
Vps50-201ENSMUST00000001412 Plb1Q3TTY0 1478 aa10.14□□□□□ -0.79
Vps50-201ENSMUST00000001412 Il27Q8K3I6 234 aa10.13□□□□□ -0.79
Vps50-201ENSMUST00000001412 Rad54l2Q99NG0 1466 aa10.13□□□□□ -0.79
Vps50-201ENSMUST00000001412 Adamts12Q811B3 1600 aa10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 55.9 ms