RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 ELP3Q02908 557 aaKnown RBP-1.31□□□□□ -2.62
snR40snR40 VPS64Q03944 604 aa-1.31□□□□□ -2.62
snR40snR40 SWF1Q04629 336 aa-1.31□□□□□ -2.62
snR40snR40 ERV2Q12284 196 aa-1.31□□□□□ -2.62
snR40snR40 ADH3P07246 375 aaKnown RBP-1.32□□□□□ -2.62
snR40snR40 PRP22P24384 1145 aaKnown RBP-1.32□□□□□ -2.62
snR40snR40 CDC60P26637 1090 aaKnown RBP-1.32□□□□□ -2.62
snR40snR40 MRPS9P38120 278 aa-1.32□□□□□ -2.62
snR40snR40 DMA1P38823 416 aa-1.32□□□□□ -2.62
snR40snR40 KRI1P42846 591 aaKnown RBP-1.32□□□□□ -2.62
snR40snR40 FET5P43561 622 aa-1.32□□□□□ -2.62
snR40snR40 GYP8P43570 497 aa-1.32□□□□□ -2.62
snR40snR40 SET2P46995 733 aaKnown RBP-1.32□□□□□ -2.62
snR40snR40 COG2P53271 262 aa-1.32□□□□□ -2.62
snR40snR40 YGR283CP53336 341 aaPredicted RBP-1.32□□□□□ -2.62
snR40snR40 DNM1P54861 757 aa-1.32□□□□□ -2.62
snR40snR40 MRPL35Q06678 367 aa-1.32□□□□□ -2.62
snR40snR40 Q0142Q9ZZW4 58 aa-1.32□□□□□ -2.62
snR40snR40 NUP145P49687 1317 aa-1.33□□□□□ -2.62
snR40snR40 YER188C-AP0C0V2 99 aa-1.33□□□□□ -2.62
snR40snR40 PET10P36139 283 aa-1.33□□□□□ -2.62
snR40snR40 PPX1P38698 397 aa-1.33□□□□□ -2.62
snR40snR40 TIM17P39515 158 aa-1.33□□□□□ -2.62
snR40snR40 CDC1P40986 491 aa-1.33□□□□□ -2.62
snR40snR40 IAH1P41734 238 aa-1.33□□□□□ -2.62
snR40snR40 HLJ1P48353 224 aa-1.33□□□□□ -2.62
snR40snR40 YNL234WP53857 426 aa-1.33□□□□□ -2.62
snR40snR40 UTP21Q06078 939 aaPredicted RBP-1.33□□□□□ -2.62
snR40snR40 ISA1Q07821 250 aaPredicted RBP-1.33□□□□□ -2.62
snR40snR40 CDC45Q08032 650 aa-1.33□□□□□ -2.62
snR40snR40 MCH4Q08268 501 aa-1.33□□□□□ -2.62
snR40snR40 FRE3Q08905 711 aa-1.33□□□□□ -2.62
snR40snR40 LEU3P08638 886 aa-1.34□□□□□ -2.62
snR40snR40 ARG1P22768 420 aa-1.34□□□□□ -2.62
snR40snR40 ATG12P38316 186 aa-1.34□□□□□ -2.62
snR40snR40 SAP1P39955 897 aaKnown RBP-1.34□□□□□ -2.62
snR40snR40 YFL052WP43551 465 aa-1.34□□□□□ -2.62
snR40snR40 GUF1P46943 645 aa-1.34□□□□□ -2.62
snR40snR40 FLC3P53121 802 aa-1.34□□□□□ -2.62
snR40snR40 YMR102CQ03177 834 aa-1.34□□□□□ -2.62
snR40snR40 PLM2Q04383 521 aa-1.34□□□□□ -2.62
snR40snR40 YDR514CQ04408 483 aa-1.34□□□□□ -2.62
snR40snR40 VBA4Q04602 768 aaKnown RBP-1.34□□□□□ -2.62
snR40snR40 VHS3Q08438 674 aa-1.34□□□□□ -2.62
snR40snR40 HEM2P05373 342 aa-1.35□□□□□ -2.63
snR40snR40 TY2A-LR1P0C2J4 438 aa-1.35□□□□□ -2.63
snR40snR40 TY2A-FP0CX61 438 aa-1.35□□□□□ -2.63
snR40snR40 TY2A-GR2P0CX62 438 aa-1.35□□□□□ -2.63
snR40snR40 MSD1P15179 658 aaKnown RBP-1.35□□□□□ -2.63
snR40snR40 FRS1P15624 595 aaKnown RBP-1.35□□□□□ -2.63
snR40snR40 TY2A-CP25383 438 aa-1.35□□□□□ -2.63
snR40snR40 UTR5P32630 166 aa-1.35□□□□□ -2.63
snR40snR40 MCD4P36051 919 aa-1.35□□□□□ -2.63
snR40snR40 DUG2P38149 878 aa-1.35□□□□□ -2.63
snR40snR40 YEL025CP39991 1188 aa-1.35□□□□□ -2.63
snR40snR40 YEN1P40028 759 aa-1.35□□□□□ -2.63
snR40snR40 REE1P40893 198 aa-1.35□□□□□ -2.63
snR40snR40 ALY2P47029 1046 aa-1.35□□□□□ -2.63
snR40snR40 IKS1P47042 667 aa-1.35□□□□□ -2.63
snR40snR40 MET13P53128 600 aa-1.35□□□□□ -2.63
snR40snR40 MSO1P53604 210 aaKnown RBP-1.35□□□□□ -2.63
snR40snR40 YAT1P80235 687 aa-1.35□□□□□ -2.63
snR40snR40 TY2A-DR2Q03483 438 aa-1.35□□□□□ -2.63
snR40snR40 EKI1Q03764 534 aa-1.35□□□□□ -2.63
snR40snR40 SHE9Q04172 456 aa-1.35□□□□□ -2.63
snR40snR40 HLR1Q04429 423 aa-1.35□□□□□ -2.63
snR40snR40 TMA64Q04600 565 aaKnown RBP-1.35□□□□□ -2.63
snR40snR40 YPR195CQ06594 109 aa-1.35□□□□□ -2.63
snR40snR40 LCB4Q12246 624 aa-1.35□□□□□ -2.63
snR40snR40 TY2A-BQ12260 438 aa-1.35□□□□□ -2.63
snR40snR40 TY2A-OR2Q12293 438 aa-1.35□□□□□ -2.63
snR40snR40 SUL2Q12325 893 aa-1.35□□□□□ -2.63
snR40snR40 TY2A-DR1Q12392 438 aa-1.35□□□□□ -2.63
snR40snR40 TY2A-OR1Q12439 438 aa-1.35□□□□□ -2.63
snR40snR40 OSH2Q12451 1283 aa-1.35□□□□□ -2.63
snR40snR40 TY2A-DR3Q99303 438 aa-1.35□□□□□ -2.63
snR40snR40 HHF1P02309 103 aaKnown RBP-1.36□□□□□ -2.63
snR40snR40 SES1P07284 462 aaKnown RBP-1.36□□□□□ -2.63
snR40snR40 SPC110P32380 944 aa-1.36□□□□□ -2.63
snR40snR40 ERG1P32476 496 aaKnown RBP-1.36□□□□□ -2.63
snR40snR40 CDC5P32562 705 aa-1.36□□□□□ -2.63
snR40snR40 HEL1P36113 551 aa-1.36□□□□□ -2.63
snR40snR40 ARA1P38115 344 aa-1.36□□□□□ -2.63
snR40snR40 DTR1P38125 572 aa-1.36□□□□□ -2.63
snR40snR40 SEC31P38968 1273 aaKnown RBP-1.36□□□□□ -2.63
snR40snR40 LAS21P40367 830 aa-1.36□□□□□ -2.63
snR40snR40 PCL10P53124 433 aa-1.36□□□□□ -2.63
snR40snR40 NUP100Q02629 959 aa-1.36□□□□□ -2.63
snR40snR40 CTL1Q03220 320 aaKnown RBP-1.36□□□□□ -2.63
snR40snR40 ESF1Q06344 628 aaKnown RBP-1.36□□□□□ -2.63
snR40snR40 MET7Q08645 548 aa-1.36□□□□□ -2.63
snR40snR40 AYT1Q12226 474 aa-1.36□□□□□ -2.63
snR40snR40 MTF1P14908 341 aaKnown RBP-1.37□□□□□ -2.63
snR40snR40 SGV1P23293 657 aaKnown RBP-1.37□□□□□ -2.63
snR40snR40 RER1P25560 188 aa-1.37□□□□□ -2.63
snR40snR40 MCM2P29469 868 aa-1.37□□□□□ -2.63
snR40snR40 PLC1P32383 869 aa-1.37□□□□□ -2.63
snR40snR40 CDC11P32458 415 aa-1.37□□□□□ -2.63
snR40snR40 NDC1P32500 655 aa-1.37□□□□□ -2.63
snR40snR40 MIC60P36112 540 aa-1.37□□□□□ -2.63
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms