RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR39B	snR39B	MCH4	Q08268	501 aa		0.93	□□□□□ -2.26
snR39B	snR39B	CDC53	Q12018	815 aa	Known RBP	0.93	□□□□□ -2.26
snR39B	snR39B	YLL056C	Q12177	298 aa		0.93	□□□□□ -2.26
snR39B	snR39B	RPS21B	Q3E754	87 aa	Known RBP	0.93	□□□□□ -2.26
snR39B	snR39B	SES1	P07284	462 aa	Known RBP	0.92	□□□□□ -2.26
snR39B	snR39B	BAR1	P12630	587 aa		0.92	□□□□□ -2.26
snR39B	snR39B	NAT1	P12945	854 aa	Known RBP	0.92	□□□□□ -2.26
snR39B	snR39B	PTC6	P25646	442 aa		0.92	□□□□□ -2.26
snR39B	snR39B	MF(ALPHA)2	P32435	120 aa		0.92	□□□□□ -2.26
snR39B	snR39B	RMA1	P36001	430 aa	Known RBP	0.92	□□□□□ -2.26
snR39B	snR39B	VBA2	P38358	474 aa	Known RBP	0.92	□□□□□ -2.26
snR39B	snR39B	PTH1	P38876	190 aa	Known RBP	0.92	□□□□□ -2.26
snR39B	snR39B	HXT6	P39003	570 aa	Known RBP	0.92	□□□□□ -2.26
snR39B	snR39B	HXT7	P39004	570 aa		0.92	□□□□□ -2.26
snR39B	snR39B	PRE5	P40302	234 aa	Known RBP	0.92	□□□□□ -2.26
snR39B	snR39B	YGL039W	P53183	348 aa	Known RBP	0.92	□□□□□ -2.26
snR39B	snR39B	EAF7	P53911	425 aa	Known RBP	0.92	□□□□□ -2.26
snR39B	snR39B	PAL1	Q05518	499 aa	Known RBP	0.92	□□□□□ -2.26
snR39B	snR39B	HEL2	Q05580	639 aa	Known RBP	0.92	□□□□□ -2.26
snR39B	snR39B	FPR4	Q06205	392 aa	Predicted RBP	0.92	□□□□□ -2.26
snR39B	snR39B	PIG1	Q06216	648 aa		0.92	□□□□□ -2.26
snR39B	snR39B	YDL242W	Q07746	117 aa		0.92	□□□□□ -2.26
snR39B	snR39B	FAP7	Q12055	197 aa	Predicted RBP	0.92	□□□□□ -2.26
snR39B	snR39B	CBP1	P07252	654 aa		0.91	□□□□□ -2.26
snR39B	snR39B	PGI1	P12709	554 aa	Known RBP	0.91	□□□□□ -2.26
snR39B	snR39B	SEC65	P29478	273 aa		0.91	□□□□□ -2.26
snR39B	snR39B	DGR2	P32330	852 aa		0.91	□□□□□ -2.26
snR39B	snR39B	MSN2	P33748	704 aa		0.91	□□□□□ -2.26
snR39B	snR39B	RPF2	P36160	344 aa	Known RBP	0.91	□□□□□ -2.26
snR39B	snR39B	FAT1	P38225	669 aa		0.91	□□□□□ -2.26
snR39B	snR39B	YIR014W	P40570	242 aa		0.91	□□□□□ -2.26
snR39B	snR39B	CDC1	P40986	491 aa		0.91	□□□□□ -2.26
snR39B	snR39B	PEF1	P53238	335 aa		0.91	□□□□□ -2.26
snR39B	snR39B	RNH70	P53331	553 aa		0.91	□□□□□ -2.26
snR39B	snR39B	YMR178W	Q03219	274 aa	Known RBP	0.91	□□□□□ -2.26
snR39B	snR39B	YDR415C	Q04033	374 aa	Predicted RBP	0.91	□□□□□ -2.26
snR39B	snR39B	YML053C	Q04978	212 aa		0.91	□□□□□ -2.26
snR39B	snR39B	RSF1	Q05043	376 aa		0.91	□□□□□ -2.26
snR39B	snR39B	LEA1	Q08963	238 aa	Predicted RBP	0.91	□□□□□ -2.26
snR39B	snR39B	YLR125W	Q12138	136 aa		0.91	□□□□□ -2.26
snR39B	snR39B	MGR1	P25573	417 aa		0.9	□□□□□ -2.27
snR39B	snR39B	PRS1	P32895	427 aa	Known RBP	0.9	□□□□□ -2.27
snR39B	snR39B	YPK3	P38070	525 aa		0.9	□□□□□ -2.27
snR39B	snR39B	BUD6	P41697	788 aa		0.9	□□□□□ -2.27
snR39B	snR39B	IAH1	P41734	238 aa		0.9	□□□□□ -2.27
snR39B	snR39B	YGL036W	P53185	909 aa	Predicted RBP	0.9	□□□□□ -2.27
snR39B	snR39B	MDR1	P53258	950 aa		0.9	□□□□□ -2.27
snR39B	snR39B	YNL234W	P53857	426 aa		0.9	□□□□□ -2.27
snR39B	snR39B	CWH43	P25618	953 aa		0.89	□□□□□ -2.27
snR39B	snR39B	YCR061W	P25639	631 aa		0.89	□□□□□ -2.27
snR39B	snR39B	YEL045C	P32616	141 aa		0.89	□□□□□ -2.27
snR39B	snR39B	OAF3	P36023	863 aa		0.89	□□□□□ -2.27
snR39B	snR39B	MGS1	P40151	587 aa		0.89	□□□□□ -2.27
snR39B	snR39B	VID28	P40547	921 aa		0.89	□□□□□ -2.27
snR39B	snR39B	SMK1	P41808	388 aa		0.89	□□□□□ -2.27
snR39B	snR39B	DIM1	P41819	318 aa	Known RBP	0.89	□□□□□ -2.27
snR39B	snR39B	SDT1	P53078	280 aa		0.89	□□□□□ -2.27
snR39B	snR39B	PTA1	Q01329	785 aa	Predicted RBP	0.89	□□□□□ -2.27
snR39B	snR39B	UTP21	Q06078	939 aa	Predicted RBP	0.89	□□□□□ -2.27
snR39B	snR39B	RPS21A	P0C0V8	87 aa	Known RBP	0.88	□□□□□ -2.27
snR39B	snR39B	SIP1	P32578	815 aa		0.88	□□□□□ -2.27
snR39B	snR39B	LEU5	P38702	357 aa		0.88	□□□□□ -2.27
snR39B	snR39B	RTS1	P38903	757 aa		0.88	□□□□□ -2.27
snR39B	snR39B	CKB2	P38930	258 aa		0.88	□□□□□ -2.27
snR39B	snR39B	NUP82	P40368	713 aa		0.88	□□□□□ -2.27
snR39B	snR39B	RTS2	P40962	232 aa		0.88	□□□□□ -2.27
snR39B	snR39B	IDS2	P46958	469 aa		0.88	□□□□□ -2.27
snR39B	snR39B	YGR153W	P48238	217 aa		0.88	□□□□□ -2.27
snR39B	snR39B	COS12	P53053	380 aa		0.88	□□□□□ -2.27
snR39B	snR39B	YRB30	P53107	440 aa	Predicted RBP	0.88	□□□□□ -2.27
snR39B	snR39B	YPR003C	P53394	754 aa		0.88	□□□□□ -2.27
snR39B	snR39B	DNM1	P54861	757 aa		0.88	□□□□□ -2.27
snR39B	snR39B	ECM9	Q02202	377 aa		0.88	□□□□□ -2.27
snR39B	snR39B	RPN4	Q03465	531 aa		0.88	□□□□□ -2.27
snR39B	snR39B	NTG2	Q08214	380 aa		0.88	□□□□□ -2.27
snR39B	snR39B	HFI1	Q12060	488 aa		0.88	□□□□□ -2.27
snR39B	snR39B	APM4	Q99186	491 aa		0.88	□□□□□ -2.27
snR39B	snR39B	YCR006C	P25350	157 aa		0.87	□□□□□ -2.27
snR39B	snR39B	HXT4	P32467	576 aa		0.87	□□□□□ -2.27
snR39B	snR39B	ARO9	P38840	513 aa	Predicted RBP	0.87	□□□□□ -2.27
snR39B	snR39B	YJR096W	P47137	282 aa		0.87	□□□□□ -2.27
snR39B	snR39B	SMA1	Q02651	245 aa		0.87	□□□□□ -2.27
snR39B	snR39B	CTL1	Q03220	320 aa	Known RBP	0.87	□□□□□ -2.27
snR39B	snR39B	BSC1	Q12140	328 aa		0.87	□□□□□ -2.27
snR39B	snR39B	VPS5	Q92331	675 aa		0.87	□□□□□ -2.27
snR39B	snR39B	SOD1	P00445	154 aa	Known RBP	0.86	□□□□□ -2.27
snR39B	snR39B	GDH1	P07262	454 aa	Known RBP	0.86	□□□□□ -2.27
snR39B	snR39B	PHO8	P11491	566 aa		0.86	□□□□□ -2.27
snR39B	snR39B	THI4	P32318	326 aa		0.86	□□□□□ -2.27
snR39B	snR39B	LOS1	P33418	1100 aa	Predicted RBP	0.86	□□□□□ -2.27
snR39B	snR39B	MIC60	P36112	540 aa		0.86	□□□□□ -2.27
snR39B	snR39B	RRP3	P38712	501 aa	Known RBP	0.86	□□□□□ -2.27
snR39B	snR39B	YEN1	P40028	759 aa		0.86	□□□□□ -2.27
snR39B	snR39B	YJL068C	P40363	299 aa		0.86	□□□□□ -2.27
snR39B	snR39B	YDL186W	P48568	277 aa		0.86	□□□□□ -2.27
snR39B	snR39B	YNL193W	P53870	558 aa		0.86	□□□□□ -2.27
snR39B	snR39B	RNY1	Q02933	434 aa	Known RBP	0.86	□□□□□ -2.27
snR39B	snR39B	YHM2	Q04013	314 aa		0.86	□□□□□ -2.27
snR39B	snR39B	POB3	Q04636	552 aa	Known RBP	0.86	□□□□□ -2.27
snR39B	snR39B	MCP2	Q06567	569 aa		0.86	□□□□□ -2.27

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