RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C PIR3Q03180 325 aa2.31□□□□□ -2.04
ATG11YPR049C RTN1Q04947 295 aaKnown RBP2.31□□□□□ -2.04
ATG11YPR049C KGD2P19262 463 aaPredicted RBP2.31□□□□□ -2.04
ATG11YPR049C TKL2P33315 681 aa2.31□□□□□ -2.04
ATG11YPR049C TCO89Q08921 799 aa2.31□□□□□ -2.04
ATG11YPR049C RVB2Q12464 471 aaKnown RBP2.31□□□□□ -2.04
ATG11YPR049C SSA3P09435 649 aaKnown RBP2.31□□□□□ -2.04
ATG11YPR049C YEL076C-AP0CX16 216 aa2.31□□□□□ -2.04
ATG11YPR049C YLR464WP0CX17 216 aa2.31□□□□□ -2.04
ATG11YPR049C ALG1P16661 449 aa2.31□□□□□ -2.04
ATG11YPR049C NPP1P25353 742 aa2.31□□□□□ -2.04
ATG11YPR049C GAC1P28006 793 aa2.31□□□□□ -2.04
ATG11YPR049C MRPL37P36532 105 aa2.31□□□□□ -2.04
ATG11YPR049C YEL076CP39971 216 aa2.31□□□□□ -2.04
ATG11YPR049C SPO22P40511 975 aa2.31□□□□□ -2.04
ATG11YPR049C COQ5P49017 307 aa2.31□□□□□ -2.04
ATG11YPR049C GPD1Q00055 391 aaKnown RBP2.31□□□□□ -2.04
ATG11YPR049C VTC3Q02725 835 aa2.31□□□□□ -2.04
ATG11YPR049C YDR131CQ03899 556 aa2.31□□□□□ -2.04
ATG11YPR049C YLR456WQ06199 204 aa2.31□□□□□ -2.04
ATG11YPR049C YPL066WQ12194 479 aa2.31□□□□□ -2.04
ATG11YPR049C PNS1Q12412 539 aa2.31□□□□□ -2.04
ATG11YPR049C FOB1O13329 566 aa2.3□□□□□ -2.04
ATG11YPR049C YLR358CO13565 187 aa2.3□□□□□ -2.04
ATG11YPR049C PMT1P33775 817 aa2.3□□□□□ -2.04
ATG11YPR049C ATG19P35193 415 aa2.3□□□□□ -2.04
ATG11YPR049C GDH3P39708 457 aa2.3□□□□□ -2.04
ATG11YPR049C VEL1P53058 206 aa2.3□□□□□ -2.04
ATG11YPR049C NOG1Q02892 647 aaKnown RBP2.3□□□□□ -2.04
ATG11YPR049C DON1Q05610 365 aa2.3□□□□□ -2.04
ATG11YPR049C MCP2Q06567 569 aa2.3□□□□□ -2.04
ATG11YPR049C INH1P01097 85 aa2.3□□□□□ -2.04
ATG11YPR049C ASP3-2P0CX77 362 aa2.3□□□□□ -2.04
ATG11YPR049C ASP3-3P0CX78 362 aa2.3□□□□□ -2.04
ATG11YPR049C ASP3-4P0CX79 362 aa2.3□□□□□ -2.04
ATG11YPR049C MATALPHA2P0CY08 210 aa2.3□□□□□ -2.04
ATG11YPR049C HMLALPHA2P0CY09 210 aa2.3□□□□□ -2.04
ATG11YPR049C ASP3-1P0CZ17 362 aa2.3□□□□□ -2.04
ATG11YPR049C TOP3P13099 656 aa2.3□□□□□ -2.04
ATG11YPR049C ABF1P14164 731 aa2.3□□□□□ -2.04
ATG11YPR049C PWP2P25635 923 aaKnown RBP2.3□□□□□ -2.04
ATG11YPR049C RML2P32611 393 aa2.3□□□□□ -2.04
ATG11YPR049C CSE1P33307 960 aa2.3□□□□□ -2.04
ATG11YPR049C UBP7P40453 1071 aa2.3□□□□□ -2.04
ATG11YPR049C DUG1P43616 481 aaKnown RBP2.3□□□□□ -2.04
ATG11YPR049C GPM2Q12008 311 aa2.3□□□□□ -2.04
ATG11YPR049C HRR25P29295 494 aaKnown RBP2.3□□□□□ -2.04
ATG11YPR049C TDA3P38758 523 aa2.3□□□□□ -2.04
ATG11YPR049C RRP8P38961 392 aaKnown RBP2.3□□□□□ -2.04
ATG11YPR049C STT3P39007 718 aaKnown RBP2.3□□□□□ -2.04
ATG11YPR049C TIM17P39515 158 aa2.3□□□□□ -2.04
ATG11YPR049C SPF1P39986 1215 aaKnown RBP2.3□□□□□ -2.04
ATG11YPR049C RPN3P40016 523 aaKnown RBP2.3□□□□□ -2.04
ATG11YPR049C RNH70P53331 553 aa2.3□□□□□ -2.04
ATG11YPR049C VAC7P53950 1165 aa2.3□□□□□ -2.04
ATG11YPR049C YAP6Q03935 383 aa2.3□□□□□ -2.04
ATG11YPR049C FAP7Q12055 197 aaPredicted RBP2.3□□□□□ -2.04
ATG11YPR049C HRT3Q12347 344 aa2.3□□□□□ -2.04
ATG11YPR049C RPL1AP0CX43 217 aaKnown RBP2.29□□□□□ -2.04
ATG11YPR049C RPL1BP0CX44 217 aaKnown RBP2.29□□□□□ -2.04
ATG11YPR049C EST1P17214 699 aaPredicted RBP2.29□□□□□ -2.04
ATG11YPR049C FUN30P31380 1131 aa2.29□□□□□ -2.04
ATG11YPR049C SPC42P36094 363 aa2.29□□□□□ -2.04
ATG11YPR049C SSY5P47002 699 aa2.29□□□□□ -2.04
ATG11YPR049C NCS2P53923 493 aaPredicted RBP2.29□□□□□ -2.04
ATG11YPR049C DIA2Q08496 732 aaPredicted RBP2.29□□□□□ -2.04
ATG11YPR049C YPR027CQ12079 277 aa2.29□□□□□ -2.04
ATG11YPR049C RTK1Q12100 620 aaPredicted RBP2.29□□□□□ -2.04
ATG11YPR049C HRP1Q99383 534 aaKnown RBP2.29□□□□□ -2.04
ATG11YPR049C COX3P00420 269 aa2.29□□□□□ -2.04
ATG11YPR049C YKL069WP36088 180 aa2.29□□□□□ -2.04
ATG11YPR049C ORC5P50874 479 aa2.29□□□□□ -2.04
ATG11YPR049C SEG1Q04279 960 aa2.29□□□□□ -2.04
ATG11YPR049C HRQ1Q05549 1077 aa2.29□□□□□ -2.04
ATG11YPR049C NAT1P12945 854 aaKnown RBP2.29□□□□□ -2.04
ATG11YPR049C ISY1P21374 235 aaPredicted RBP2.29□□□□□ -2.04
ATG11YPR049C MVD1P32377 396 aaKnown RBP2.29□□□□□ -2.04
ATG11YPR049C MIA40P36046 403 aa2.29□□□□□ -2.04
ATG11YPR049C HFM1P51979 1187 aa2.29□□□□□ -2.04
ATG11YPR049C DIP5P53388 608 aa2.29□□□□□ -2.04
ATG11YPR049C FPR4Q06205 392 aaPredicted RBP2.29□□□□□ -2.04
ATG11YPR049C CIR2Q08822 631 aa2.29□□□□□ -2.04
ATG11YPR049C SSB1P11484 613 aaKnown RBP2.28□□□□□ -2.04
ATG11YPR049C PDE1P22434 369 aa2.28□□□□□ -2.04
ATG11YPR049C MRPL9P31334 269 aa2.28□□□□□ -2.04
ATG11YPR049C HIR1P32479 840 aa2.28□□□□□ -2.04
ATG11YPR049C VID24P38263 362 aa2.28□□□□□ -2.04
ATG11YPR049C SSB2P40150 613 aaKnown RBP2.28□□□□□ -2.04
ATG11YPR049C TOK1P40310 691 aa2.28□□□□□ -2.04
ATG11YPR049C CTF18P49956 741 aa2.28□□□□□ -2.04
ATG11YPR049C COQ6P53318 479 aa2.28□□□□□ -2.04
ATG11YPR049C PPM1Q04081 328 aa2.28□□□□□ -2.04
ATG11YPR049C MDM38Q08179 573 aa2.28□□□□□ -2.04
ATG11YPR049C PER33Q12144 273 aa2.28□□□□□ -2.04
ATG11YPR049C LPX1Q12405 387 aaKnown RBP2.28□□□□□ -2.04
ATG11YPR049C CHS1P08004 1131 aa2.28□□□□□ -2.04
ATG11YPR049C DID4P36108 232 aa2.28□□□□□ -2.04
ATG11YPR049C PIM1P36775 1133 aa2.28□□□□□ -2.04
ATG11YPR049C YMC2P38087 329 aa2.28□□□□□ -2.04
ATG11YPR049C PYK2P52489 506 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 116.8 ms