RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C SFL1P20134 766 aa7.37□□□□□ -1.23
UME1YPL139C CCR4P31384 837 aaKnown RBP7.37□□□□□ -1.23
UME1YPL139C PMT1P33775 817 aa7.37□□□□□ -1.23
UME1YPL139C PXA2P34230 853 aa7.37□□□□□ -1.23
UME1YPL139C MCX1P38323 520 aaPredicted RBP7.37□□□□□ -1.23
UME1YPL139C ARG2P40360 574 aa7.37□□□□□ -1.23
UME1YPL139C RRN7P40992 514 aa7.37□□□□□ -1.23
UME1YPL139C MNN10P50108 393 aaKnown RBP7.37□□□□□ -1.23
UME1YPL139C MNT2P53059 558 aa7.37□□□□□ -1.23
UME1YPL139C ALF1P53904 254 aa7.37□□□□□ -1.23
UME1YPL139C BOP3P53958 396 aa7.37□□□□□ -1.23
UME1YPL139C CTR9P89105 1077 aa7.37□□□□□ -1.23
UME1YPL139C PUF3Q07807 879 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
UME1YPL139C TPO1Q07824 586 aa7.37□□□□□ -1.23
UME1YPL139C CLP1Q08685 445 aaPredicted RBP7.37□□□□□ -1.23
UME1YPL139C NAG1Q8TGN9 163 aa7.37□□□□□ -1.23
UME1YPL139C SLY1P22213 666 aa7.36□□□□□ -1.23
UME1YPL139C PUF4P25339 888 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
UME1YPL139C PAP1P29468 568 aaKnown RBP7.36□□□□□ -1.23
UME1YPL139C UTR2P32623 467 aa7.36□□□□□ -1.23
UME1YPL139C ADD66P36040 267 aa7.36□□□□□ -1.23
UME1YPL139C EBP2P36049 427 aaKnown RBP7.36□□□□□ -1.23
UME1YPL139C FUI1P38196 639 aa7.36□□□□□ -1.23
UME1YPL139C OTU2P38747 307 aaKnown RBP7.36□□□□□ -1.23
UME1YPL139C END3P39013 349 aa7.36□□□□□ -1.23
UME1YPL139C TIF34P40217 347 aaKnown RBP7.36□□□□□ -1.23
UME1YPL139C TCB2P48231 1178 aa7.36□□□□□ -1.23
UME1YPL139C NUP84P52891 726 aa7.36□□□□□ -1.23
UME1YPL139C RIM8P53179 542 aa7.36□□□□□ -1.23
UME1YPL139C SNO2P53823 222 aa7.36□□□□□ -1.23
UME1YPL139C YNL247WP53852 767 aaKnown RBP7.36□□□□□ -1.23
UME1YPL139C IPI3P53877 555 aa7.36□□□□□ -1.23
UME1YPL139C ARP9Q05123 467 aa7.36□□□□□ -1.23
UME1YPL139C YPR148CQ06523 435 aa7.36□□□□□ -1.23
UME1YPL139C TFB4Q12004 338 aa7.36□□□□□ -1.23
UME1YPL139C TUB3P09734 445 aaKnown RBP7.35□□□□□ -1.23
UME1YPL139C SST2P11972 698 aaKnown RBP7.35□□□□□ -1.23
UME1YPL139C CIN8P27895 1000 aa7.35□□□□□ -1.23
UME1YPL139C MRS6P32864 603 aaKnown RBP7.35□□□□□ -1.23
UME1YPL139C MFT1P33441 392 aaKnown RBP7.35□□□□□ -1.23
UME1YPL139C SPC72P39723 622 aa7.35□□□□□ -1.23
UME1YPL139C COQ5P49017 307 aa7.35□□□□□ -1.23
UME1YPL139C NBP35P52920 328 aa7.35□□□□□ -1.23
UME1YPL139C COG7P53195 279 aa7.35□□□□□ -1.23
UME1YPL139C VPS9P54787 451 aa7.35□□□□□ -1.23
UME1YPL139C YMR160WQ03823 816 aa7.35□□□□□ -1.23
UME1YPL139C CMS1Q07897 291 aaKnown RBP7.35□□□□□ -1.23
UME1YPL139C SAM4Q08985 325 aaKnown RBP7.35□□□□□ -1.23
UME1YPL139C MET32Q12041 191 aa7.35□□□□□ -1.23
UME1YPL139C Q0182Q9ZZW1 134 aa7.35□□□□□ -1.23
UME1YPL139C UBR1P19812 1950 aa7.35□□□□□ -1.23
UME1YPL139C CSF1Q12150 2958 aa7.35□□□□□ -1.23
UME1YPL139C PYC1P11154 1178 aaKnown RBP7.34□□□□□ -1.23
UME1YPL139C RBK1P25332 333 aa7.34□□□□□ -1.23
UME1YPL139C TFB1P32776 642 aa7.34□□□□□ -1.23
UME1YPL139C YBP1P38315 674 aa7.34□□□□□ -1.23
UME1YPL139C TAE1P38340 232 aa7.34□□□□□ -1.23
UME1YPL139C TIM17P39515 158 aa7.34□□□□□ -1.23
UME1YPL139C ELO3P40319 345 aa7.34□□□□□ -1.23
UME1YPL139C RAD26P40352 1085 aa7.34□□□□□ -1.23
UME1YPL139C YJR061WP40355 935 aa7.34□□□□□ -1.23
UME1YPL139C RPL34BP40525 121 aaKnown RBP7.34□□□□□ -1.23
UME1YPL139C MNN11P46985 422 aaKnown RBP7.34□□□□□ -1.23
UME1YPL139C GLG2P47011 380 aa7.34□□□□□ -1.23
UME1YPL139C YJL132WP47014 750 aa7.34□□□□□ -1.23
UME1YPL139C STR3P53101 465 aaKnown RBP7.34□□□□□ -1.23
UME1YPL139C TEP1P53916 434 aa7.34□□□□□ -1.23
UME1YPL139C ORC3P54790 616 aa7.34□□□□□ -1.23
UME1YPL139C YMR114CQ04471 368 aaKnown RBP7.34□□□□□ -1.23
UME1YPL139C GNT1Q12096 491 aa7.34□□□□□ -1.23
UME1YPL139C YLR149CQ99296 730 aa7.34□□□□□ -1.23
UME1YPL139C AI5_ALPHAQ9ZZX1 630 aa7.34□□□□□ -1.23
UME1YPL139C NUM1Q00402 2748 aa7.34□□□□□ -1.23
UME1YPL139C MIH1P23748 554 aa7.33□□□□□ -1.24
UME1YPL139C SCD5P34758 872 aa7.33□□□□□ -1.24
UME1YPL139C PHO11P35842 467 aa7.33□□□□□ -1.24
UME1YPL139C SPC42P36094 363 aa7.33□□□□□ -1.24
UME1YPL139C PHO12P38693 467 aa7.33□□□□□ -1.24
UME1YPL139C YAT2P40017 923 aa7.33□□□□□ -1.24
UME1YPL139C YPS6P40583 537 aa7.33□□□□□ -1.24
UME1YPL139C SET2P46995 733 aaKnown RBP7.33□□□□□ -1.24
UME1YPL139C YML6P51998 286 aa7.33□□□□□ -1.24
UME1YPL139C TDA9Q04545 1251 aa7.33□□□□□ -1.24
UME1YPL139C YDL073WQ07454 984 aa7.33□□□□□ -1.24
UME1YPL139C OPI10Q08202 246 aa7.33□□□□□ -1.24
UME1YPL139C SCH9P11792 824 aaKnown RBP7.33□□□□□ -1.24
UME1YPL139C PMS1P14242 873 aa7.33□□□□□ -1.24
UME1YPL139C ACO1P19414 778 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
UME1YPL139C CLN1P20437 546 aa7.33□□□□□ -1.24
UME1YPL139C CKI1P20485 582 aa7.33□□□□□ -1.24
UME1YPL139C CSE1P33307 960 aa7.33□□□□□ -1.24
UME1YPL139C TGL4P36165 910 aa7.33□□□□□ -1.24
UME1YPL139C YHR078WP38799 552 aa7.33□□□□□ -1.24
UME1YPL139C YPT35P38815 214 aaKnown RBP7.33□□□□□ -1.24
UME1YPL139C TES1P41903 349 aaKnown RBP7.33□□□□□ -1.24
UME1YPL139C ROK1P45818 564 aaPredicted RBP7.33□□□□□ -1.24
UME1YPL139C CSN12P47130 423 aa7.33□□□□□ -1.24
UME1YPL139C HST3P53687 447 aa7.33□□□□□ -1.24
UME1YPL139C ENT5Q03769 411 aaKnown RBP7.33□□□□□ -1.24
UME1YPL139C VAC14Q06708 880 aa7.33□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms