RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W RPL42AP0CX27 106 aaKnown RBP3.49□□□□□ -1.85
BUD21YOR078W RPL42BP0CX28 106 aaKnown RBP3.49□□□□□ -1.85
BUD21YOR078W SRP54P20424 541 aaKnown RBP3.49□□□□□ -1.85
BUD21YOR078W PPZ1P26570 692 aa3.49□□□□□ -1.85
BUD21YOR078W DEP1P31385 405 aa3.49□□□□□ -1.85
BUD21YOR078W LAS21P40367 830 aa3.49□□□□□ -1.85
BUD21YOR078W ACS1Q01574 713 aa3.49□□□□□ -1.85
BUD21YOR078W PLM2Q04383 521 aa3.49□□□□□ -1.85
BUD21YOR078W GSH2Q08220 491 aa3.49□□□□□ -1.85
BUD21YOR078W PET111P08468 800 aa3.48□□□□□ -1.85
BUD21YOR078W SWI3P32591 825 aa3.48□□□□□ -1.85
BUD21YOR078W TYS1P36421 394 aaKnown RBP3.48□□□□□ -1.85
BUD21YOR078W YBR139WP38109 508 aa3.48□□□□□ -1.85
BUD21YOR078W MED8P38304 223 aa3.48□□□□□ -1.85
BUD21YOR078W YND1P40009 630 aa3.48□□□□□ -1.85
BUD21YOR078W MAM1P40065 302 aa3.48□□□□□ -1.85
BUD21YOR078W YJL107CP42947 387 aa3.48□□□□□ -1.85
BUD21YOR078W SAD1P43589 448 aa3.48□□□□□ -1.85
BUD21YOR078W BET4Q00618 327 aa3.48□□□□□ -1.85
BUD21YOR078W NGL1Q08213 363 aaKnown RBP3.48□□□□□ -1.85
BUD21YOR078W NOP14Q99207 810 aaKnown RBP3.48□□□□□ -1.85
BUD21YOR078W SWR1Q05471 1514 aa3.48□□□□□ -1.85
BUD21YOR078W TRM3Q07527 1436 aa3.47□□□□□ -1.85
BUD21YOR078W CIN4P39110 191 aa3.47□□□□□ -1.85
BUD21YOR078W OSW7P43611 510 aa3.47□□□□□ -1.85
BUD21YOR078W MNN11P46985 422 aaKnown RBP3.47□□□□□ -1.85
BUD21YOR078W YML053CQ04978 212 aa3.47□□□□□ -1.85
BUD21YOR078W CDC45Q08032 650 aa3.47□□□□□ -1.85
BUD21YOR078W RAD9P14737 1309 aa3.46□□□□□ -1.85
BUD21YOR078W MLP2P40457 1679 aa3.46□□□□□ -1.85
BUD21YOR078W ATP12P22135 325 aa3.46□□□□□ -1.86
BUD21YOR078W RRP14P36080 434 aaKnown RBP3.46□□□□□ -1.86
BUD21YOR078W COS12P53053 380 aa3.46□□□□□ -1.86
BUD21YOR078W PAP2P53632 584 aaKnown RBP3.46□□□□□ -1.86
BUD21YOR078W YTM1Q12024 460 aaPredicted RBP3.46□□□□□ -1.86
BUD21YOR078W LSP1Q12230 341 aaKnown RBP3.46□□□□□ -1.86
BUD21YOR078W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
BUD21YOR078W SCC2Q04002 1493 aa3.46□□□□□ -1.86
BUD21YOR078W RPP0P05317 312 aaKnown RBP3.45□□□□□ -1.86
BUD21YOR078W AEP2P22136 580 aa3.45□□□□□ -1.86
BUD21YOR078W RAD51P25454 400 aa3.45□□□□□ -1.86
BUD21YOR078W DID4P36108 232 aa3.45□□□□□ -1.86
BUD21YOR078W RRP8P38961 392 aaKnown RBP3.45□□□□□ -1.86
BUD21YOR078W VPS27P40343 622 aaKnown RBP3.45□□□□□ -1.86
BUD21YOR078W UBP7P40453 1071 aa3.45□□□□□ -1.86
BUD21YOR078W YNL144CP53907 740 aa3.45□□□□□ -1.86
BUD21YOR078W GEA1P47102 1408 aaPredicted RBP3.44□□□□□ -1.86
BUD21YOR078W DNA2P38859 1522 aa3.44□□□□□ -1.86
BUD21YOR078W POL1P13382 1468 aa3.44□□□□□ -1.86
BUD21YOR078W SES1P07284 462 aaKnown RBP3.44□□□□□ -1.86
BUD21YOR078W CWH43P25618 953 aa3.44□□□□□ -1.86
BUD21YOR078W ZUO1P32527 433 aaKnown RBP3.44□□□□□ -1.86
BUD21YOR078W SWH1P35845 1188 aa3.44□□□□□ -1.86
BUD21YOR078W RSC1P53236 928 aa3.44□□□□□ -1.86
BUD21YOR078W MDG1P53885 366 aa3.44□□□□□ -1.86
BUD21YOR078W TLG1Q03322 224 aa3.44□□□□□ -1.86
BUD21YOR078W ERV41Q04651 352 aa3.44□□□□□ -1.86
BUD21YOR078W YDL242WQ07746 117 aa3.44□□□□□ -1.86
BUD21YOR078W THI73Q07904 523 aa3.44□□□□□ -1.86
BUD21YOR078W APL5Q08951 932 aaKnown RBP3.44□□□□□ -1.86
BUD21YOR078W HIF1Q12373 385 aa3.44□□□□□ -1.86
BUD21YOR078W YER175W-AQ8TGU4 54 aa3.44□□□□□ -1.86
BUD21YOR078W NUP159P40477 1460 aa3.43□□□□□ -1.86
BUD21YOR078W KAR3P17119 729 aa3.43□□□□□ -1.86
BUD21YOR078W ARG1P22768 420 aa3.43□□□□□ -1.86
BUD21YOR078W SER1P33330 395 aaKnown RBP3.43□□□□□ -1.86
BUD21YOR078W ORC5P50874 479 aa3.43□□□□□ -1.86
BUD21YOR078W MDR1P53258 950 aa3.43□□□□□ -1.86
BUD21YOR078W SFI1Q12369 946 aa3.43□□□□□ -1.86
BUD21YOR078W RVB2Q12464 471 aaKnown RBP3.43□□□□□ -1.86
BUD21YOR078W REV3P14284 1504 aa3.43□□□□□ -1.86
BUD21YOR078W TSC11P40061 1430 aa3.43□□□□□ -1.86
BUD21YOR078W BPT1P14772 1559 aa3.42□□□□□ -1.86
BUD21YOR078W RAD3P06839 778 aa3.42□□□□□ -1.86
BUD21YOR078W GSH1P32477 678 aa3.42□□□□□ -1.86
BUD21YOR078W TOA1P32773 286 aa3.42□□□□□ -1.86
BUD21YOR078W NIC96P34077 839 aa3.42□□□□□ -1.86
BUD21YOR078W STB5P38699 743 aa3.42□□□□□ -1.86
BUD21YOR078W ARN1P38731 627 aa3.42□□□□□ -1.86
BUD21YOR078W ARO9P38840 513 aaPredicted RBP3.42□□□□□ -1.86
BUD21YOR078W DHH1P39517 506 aaKnown RBP3.42□□□□□ -1.86
BUD21YOR078W YNL050CP53952 270 aa3.42□□□□□ -1.86
BUD21YOR078W MRS2Q01926 470 aa3.42□□□□□ -1.86
BUD21YOR078W VPS72Q03388 795 aa3.42□□□□□ -1.86
BUD21YOR078W SEC39Q12745 709 aa3.42□□□□□ -1.86
BUD21YOR078W VPS5Q92331 675 aa3.42□□□□□ -1.86
BUD21YOR078W YOL087CQ99247 1116 aa3.42□□□□□ -1.86
BUD21YOR078W SIN3P22579 1536 aa3.42□□□□□ -1.86
BUD21YOR078W HSL1P34244 1518 aa3.41□□□□□ -1.86
BUD21YOR078W MIC60P36112 540 aa3.41□□□□□ -1.86
BUD21YOR078W NAB3P38996 802 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
BUD21YOR078W IRC5P43610 853 aa3.41□□□□□ -1.86
BUD21YOR078W PXR1P53335 271 aaPredicted RBP3.41□□□□□ -1.86
BUD21YOR078W DNM1P54861 757 aa3.41□□□□□ -1.86
BUD21YOR078W YAT1P80235 687 aa3.41□□□□□ -1.86
BUD21YOR078W ADR1P07248 1323 aa3.41□□□□□ -1.86
BUD21YOR078W GCN2P15442 1659 aa3.4□□□□□ -1.86
BUD21YOR078W HSC82P15108 705 aaKnown RBP3.4□□□□□ -1.87
BUD21YOR078W PUP2P32379 260 aa3.4□□□□□ -1.87
BUD21YOR078W RKM3P38222 552 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms