RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A TUF1P02992 437 aaKnown RBP4.1□□□□□ -1.75
YSF3YNL138W-A TPK2P06245 380 aa4.1□□□□□ -1.75
YSF3YNL138W-A HOP1P20050 605 aa4.1□□□□□ -1.75
YSF3YNL138W-A KRE2P27809 442 aa4.1□□□□□ -1.75
YSF3YNL138W-A CNE1P27825 502 aa4.1□□□□□ -1.75
YSF3YNL138W-A FLO10P36170 1169 aa4.1□□□□□ -1.75
YSF3YNL138W-A RIX1P38883 763 aaPredicted RBP4.1□□□□□ -1.75
YSF3YNL138W-A SCS2P40075 244 aaKnown RBP4.1□□□□□ -1.75
YSF3YNL138W-A SSP2Q08646 371 aa4.1□□□□□ -1.75
YSF3YNL138W-A RPN13O13563 156 aa4.09□□□□□ -1.75
YSF3YNL138W-A RPA135P22138 1203 aaKnown RBP4.09□□□□□ -1.75
YSF3YNL138W-A PHO3P24031 467 aa4.09□□□□□ -1.75
YSF3YNL138W-A SAT4P25333 603 aaKnown RBP4.09□□□□□ -1.75
YSF3YNL138W-A CAP1P28495 268 aaKnown RBP4.09□□□□□ -1.75
YSF3YNL138W-A PET309P32522 965 aaPredicted RBP4.09□□□□□ -1.75
YSF3YNL138W-A PEX2P32800 271 aa4.09□□□□□ -1.75
YSF3YNL138W-A AFG3P39925 761 aa4.09□□□□□ -1.75
YSF3YNL138W-A FMP30Q02883 468 aa4.09□□□□□ -1.75
YSF3YNL138W-A GIS1Q03833 894 aa4.09□□□□□ -1.75
YSF3YNL138W-A ARO10Q06408 635 aa4.09□□□□□ -1.75
YSF3YNL138W-A YPL216WQ08964 1102 aa4.09□□□□□ -1.75
YSF3YNL138W-A PSF3Q12146 194 aa4.09□□□□□ -1.75
YSF3YNL138W-A HOS1Q12214 470 aa4.09□□□□□ -1.75
YSF3YNL138W-A DBP10Q12389 995 aaKnown RBP4.09□□□□□ -1.75
YSF3YNL138W-A TUB1P09733 447 aaKnown RBP4.08□□□□□ -1.76
YSF3YNL138W-A SEC12P11655 471 aa4.08□□□□□ -1.76
YSF3YNL138W-A RPS7AP26786 190 aaKnown RBP4.08□□□□□ -1.76
YSF3YNL138W-A YMC1P32331 307 aa4.08□□□□□ -1.76
YSF3YNL138W-A DSS4P32601 143 aa4.08□□□□□ -1.76
YSF3YNL138W-A STB5P38699 743 aa4.08□□□□□ -1.76
YSF3YNL138W-A PIH1P38768 344 aa4.08□□□□□ -1.76
YSF3YNL138W-A VID30P53076 958 aa4.08□□□□□ -1.76
YSF3YNL138W-A YGL117WP53133 265 aa4.08□□□□□ -1.76
YSF3YNL138W-A CNM67P53865 581 aaKnown RBP4.08□□□□□ -1.76
YSF3YNL138W-A RPS15Q01855 142 aaKnown RBP4.08□□□□□ -1.76
YSF3YNL138W-A TAP42Q04372 366 aa4.08□□□□□ -1.76
YSF3YNL138W-A HOF1Q05080 669 aa4.08□□□□□ -1.76
YSF3YNL138W-A DAP1Q12091 152 aa4.08□□□□□ -1.76
YSF3YNL138W-A TUS1Q06412 1307 aa4.07□□□□□ -1.76
YSF3YNL138W-A ADH4P10127 382 aa4.07□□□□□ -1.76
YSF3YNL138W-A CBP3P21560 335 aa4.07□□□□□ -1.76
YSF3YNL138W-A NIC96P34077 839 aa4.07□□□□□ -1.76
YSF3YNL138W-A TGL1P34163 548 aa4.07□□□□□ -1.76
YSF3YNL138W-A RIM4P38741 713 aa4.07□□□□□ -1.76
YSF3YNL138W-A SPL2P38839 148 aa4.07□□□□□ -1.76
YSF3YNL138W-A SAW1P39735 261 aa4.07□□□□□ -1.76
YSF3YNL138W-A SSP120P39931 234 aaKnown RBP4.07□□□□□ -1.76
YSF3YNL138W-A PAC2P39937 518 aa4.07□□□□□ -1.76
YSF3YNL138W-A RPT4P53549 437 aaKnown RBP4.07□□□□□ -1.76
YSF3YNL138W-A CPR8P53728 308 aa4.07□□□□□ -1.76
YSF3YNL138W-A CEG1Q01159 459 aaPredicted RBP4.07□□□□□ -1.76
YSF3YNL138W-A PRP42Q03776 544 aaKnown RBP4.07□□□□□ -1.76
YSF3YNL138W-A ICL2Q12031 575 aa4.07□□□□□ -1.76
YSF3YNL138W-A ZPS1Q12512 249 aa4.07□□□□□ -1.76
YSF3YNL138W-A IRA1P18963 3092 aa4.07□□□□□ -1.76
YSF3YNL138W-A ECM29P38737 1868 aa4.07□□□□□ -1.76
YSF3YNL138W-A UGP1P32861 499 aaKnown RBP4.06□□□□□ -1.76
YSF3YNL138W-A IMA5P40884 581 aa4.06□□□□□ -1.76
YSF3YNL138W-A ASK10P48361 1146 aa4.06□□□□□ -1.76
YSF3YNL138W-A MRK1P50873 501 aa4.06□□□□□ -1.76
YSF3YNL138W-A ACS1Q01574 713 aa4.06□□□□□ -1.76
YSF3YNL138W-A LGE1Q02796 332 aaKnown RBP4.06□□□□□ -1.76
YSF3YNL138W-A USA1Q03714 838 aa4.06□□□□□ -1.76
YSF3YNL138W-A UBX2Q04228 584 aa4.06□□□□□ -1.76
YSF3YNL138W-A ARG7Q04728 441 aa4.06□□□□□ -1.76
YSF3YNL138W-A ADE5,7P07244 802 aaKnown RBP4.05□□□□□ -1.76
YSF3YNL138W-A VAS1P07806 1104 aaKnown RBP4.05□□□□□ -1.76
YSF3YNL138W-A SST2P11972 698 aaKnown RBP4.05□□□□□ -1.76
YSF3YNL138W-A BET2P20133 325 aa4.05□□□□□ -1.76
YSF3YNL138W-A CDC60P26637 1090 aaKnown RBP4.05□□□□□ -1.76
YSF3YNL138W-A SDS22P36047 338 aa4.05□□□□□ -1.76
YSF3YNL138W-A CCL1P37366 393 aa4.05□□□□□ -1.76
YSF3YNL138W-A YPT10P38146 199 aa4.05□□□□□ -1.76
YSF3YNL138W-A KEL1P38853 1164 aaKnown RBP4.05□□□□□ -1.76
YSF3YNL138W-A ATF1P40353 525 aa4.05□□□□□ -1.76
YSF3YNL138W-A NET1P47035 1189 aa4.05□□□□□ -1.76
YSF3YNL138W-A SAP4P53036 818 aa4.05□□□□□ -1.76
YSF3YNL138W-A COQ6P53318 479 aa4.05□□□□□ -1.76
YSF3YNL138W-A IOC4Q04213 475 aa4.05□□□□□ -1.76
YSF3YNL138W-A YDL073WQ07454 984 aa4.05□□□□□ -1.76
YSF3YNL138W-A ULA1Q12059 462 aa4.05□□□□□ -1.76
YSF3YNL138W-A TY3A-GQ12173 290 aa4.05□□□□□ -1.76
YSF3YNL138W-A TY3A-IQ99219 290 aa4.05□□□□□ -1.76
YSF3YNL138W-A CPA2P03965 1118 aaKnown RBP4.04□□□□□ -1.76
YSF3YNL138W-A YPK1P12688 680 aaKnown RBP4.04□□□□□ -1.76
YSF3YNL138W-A AAD3P25612 363 aa4.04□□□□□ -1.76
YSF3YNL138W-A CUE2P36075 443 aaKnown RBP4.04□□□□□ -1.76
YSF3YNL138W-A SWD1P39706 426 aa4.04□□□□□ -1.76
YSF3YNL138W-A PUS4P48567 403 aaKnown RBP4.04□□□□□ -1.76
YSF3YNL138W-A COS12P53053 380 aa4.04□□□□□ -1.76
YSF3YNL138W-A MET14Q02196 202 aa4.04□□□□□ -1.76
YSF3YNL138W-A YOL057WQ08225 711 aa4.04□□□□□ -1.76
YSF3YNL138W-A MRN1Q08925 612 aaKnown RBP RIP-Chip data4.04□□□□□ -1.76not detected
YSF3YNL138W-A TGS1Q12052 315 aa4.04□□□□□ -1.76
YSF3YNL138W-A GAL1P04385 528 aa4.03□□□□□ -1.76
YSF3YNL138W-A WHI2P12611 486 aa4.03□□□□□ -1.76
YSF3YNL138W-A RNR3P21672 869 aaKnown RBP4.03□□□□□ -1.76
YSF3YNL138W-A ILV6P25605 309 aaKnown RBP4.03□□□□□ -1.76
YSF3YNL138W-A LOT5P34234 306 aa4.03□□□□□ -1.76
YSF3YNL138W-A IMO32P53219 342 aa4.03□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms