RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C HEM1P09950 548 aaPredicted RBP5.68□□□□□ -1.5
NMD4YLR363C RNR3P21672 869 aaKnown RBP5.68□□□□□ -1.5
NMD4YLR363C ARG1P22768 420 aa5.68□□□□□ -1.5
NMD4YLR363C RIM13Q03792 727 aa5.68□□□□□ -1.5
NMD4YLR363C HOF1Q05080 669 aa5.68□□□□□ -1.5
NMD4YLR363C CTI6Q08923 506 aa5.68□□□□□ -1.5
NMD4YLR363C PSF3Q12146 194 aa5.68□□□□□ -1.5
NMD4YLR363C URA3P03962 267 aa5.67□□□□□ -1.5
NMD4YLR363C MDM10P18409 493 aa5.67□□□□□ -1.5
NMD4YLR363C SMY1P32364 656 aaKnown RBP5.67□□□□□ -1.5
NMD4YLR363C HOT13P36078 116 aa5.67□□□□□ -1.5
NMD4YLR363C YIL092WP40497 633 aa5.67□□□□□ -1.5
NMD4YLR363C YNR071CP53757 342 aa5.67□□□□□ -1.5
NMD4YLR363C ERO1Q03103 563 aa5.67□□□□□ -1.5
NMD4YLR363C IRC3Q06683 689 aa5.67□□□□□ -1.5
NMD4YLR363C DIN7Q12086 430 aa5.67□□□□□ -1.5
NMD4YLR363C PGK1P00560 416 aaKnown RBP5.66□□□□□ -1.5
NMD4YLR363C AAC1P04710 309 aa5.66□□□□□ -1.5
NMD4YLR363C CBP3P21560 335 aa5.66□□□□□ -1.5
NMD4YLR363C MRPL9P31334 269 aa5.66□□□□□ -1.5
NMD4YLR363C RPC34P32910 317 aa5.66□□□□□ -1.5
NMD4YLR363C OPT1P40897 799 aa5.66□□□□□ -1.5
NMD4YLR363C PIP2P52960 996 aa5.66□□□□□ -1.5
NMD4YLR363C ALE1Q08548 619 aa5.66□□□□□ -1.5
NMD4YLR363C SHC1P39000 512 aa5.65□□□□□ -1.5
NMD4YLR363C YFL015CP43578 164 aa5.65□□□□□ -1.5
NMD4YLR363C WAR1Q03631 944 aa5.65□□□□□ -1.5
NMD4YLR363C YPK1P12688 680 aaKnown RBP5.64□□□□□ -1.51
NMD4YLR363C NUP1P20676 1076 aa5.64□□□□□ -1.51
NMD4YLR363C PHO3P24031 467 aa5.64□□□□□ -1.51
NMD4YLR363C GSM1P42950 618 aa5.64□□□□□ -1.51
NMD4YLR363C YGL082WP53155 381 aa5.64□□□□□ -1.51
NMD4YLR363C TRI1Q05024 226 aa5.64□□□□□ -1.51
NMD4YLR363C GRX6Q12438 231 aa5.64□□□□□ -1.51
NMD4YLR363C LYS2P07702 1392 aa5.64□□□□□ -1.51
NMD4YLR363C TOP1P04786 769 aa5.63□□□□□ -1.51
NMD4YLR363C APN1P22936 367 aa5.63□□□□□ -1.51
NMD4YLR363C CDC5P32562 705 aa5.63□□□□□ -1.51
NMD4YLR363C TGL1P34163 548 aa5.63□□□□□ -1.51
NMD4YLR363C SDS22P36047 338 aa5.63□□□□□ -1.51
NMD4YLR363C SDH8P38345 138 aa5.63□□□□□ -1.51
NMD4YLR363C YJL043WP47053 257 aa5.63□□□□□ -1.51
NMD4YLR363C COS12P53053 380 aa5.63□□□□□ -1.51
NMD4YLR363C CNM67P53865 581 aaKnown RBP5.63□□□□□ -1.51
NMD4YLR363C YNL050CP53952 270 aa5.63□□□□□ -1.51
NMD4YLR363C CRT10Q08226 957 aa5.63□□□□□ -1.51
NMD4YLR363C AQY1P0CD91 305 aa5.62□□□□□ -1.51
NMD4YLR363C ICL1P28240 557 aaPredicted RBP5.62□□□□□ -1.51
NMD4YLR363C APD1P38281 316 aa5.62□□□□□ -1.51
NMD4YLR363C SAW1P39735 261 aa5.62□□□□□ -1.51
NMD4YLR363C EXO1P39875 702 aa5.62□□□□□ -1.51
NMD4YLR363C LTP1P40347 161 aa5.62□□□□□ -1.51
NMD4YLR363C PUS4P48567 403 aaKnown RBP5.62□□□□□ -1.51
NMD4YLR363C IOC4Q04213 475 aa5.62□□□□□ -1.51
NMD4YLR363C ORM2Q06144 216 aa5.62□□□□□ -1.51
NMD4YLR363C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
NMD4YLR363C NUR1Q12066 484 aa5.62□□□□□ -1.51
NMD4YLR363C DBP10Q12389 995 aaKnown RBP5.62□□□□□ -1.51
NMD4YLR363C SSK22P25390 1331 aaPredicted RBP5.62□□□□□ -1.51
NMD4YLR363C MBR1P23493 339 aa5.61□□□□□ -1.51
NMD4YLR363C SCS2P40075 244 aaKnown RBP5.61□□□□□ -1.51
NMD4YLR363C VAS1P07806 1104 aaKnown RBP5.6□□□□□ -1.51
NMD4YLR363C STB5P38699 743 aa5.6□□□□□ -1.51
NMD4YLR363C MAM1P40065 302 aa5.6□□□□□ -1.51
NMD4YLR363C TDA10P42938 290 aa5.6□□□□□ -1.51
NMD4YLR363C IDS2P46958 469 aa5.6□□□□□ -1.51
NMD4YLR363C BNA3P47039 444 aaKnown RBP5.6□□□□□ -1.51
NMD4YLR363C PCL8Q08966 492 aa5.6□□□□□ -1.51
NMD4YLR363C YLR278CQ05854 1341 aa5.59□□□□□ -1.51
NMD4YLR363C PTP1P25044 335 aa5.59□□□□□ -1.51
NMD4YLR363C RRP8P38961 392 aaKnown RBP5.59□□□□□ -1.51
NMD4YLR363C RRP46P53256 223 aaPredicted RBP5.59□□□□□ -1.51
NMD4YLR363C ATP23P53722 227 aa5.59□□□□□ -1.51
NMD4YLR363C SYF1Q04048 859 aaPredicted RBP5.59□□□□□ -1.51
NMD4YLR363C AFT2Q08957 416 aa5.59□□□□□ -1.51
NMD4YLR363C AHA1Q12449 350 aaKnown RBP5.59□□□□□ -1.51
NMD4YLR363C UTP10P42945 1769 aaKnown RBP5.59□□□□□ -1.51
NMD4YLR363C MSM1P22438 575 aa5.58□□□□□ -1.52
NMD4YLR363C GSY2P27472 705 aa5.58□□□□□ -1.52
NMD4YLR363C YLF2P38746 405 aa5.58□□□□□ -1.52
NMD4YLR363C VFA1P40080 203 aa5.58□□□□□ -1.52
NMD4YLR363C RTR1P40084 226 aaPredicted RBP5.58□□□□□ -1.52
NMD4YLR363C XBP1P40489 647 aa5.58□□□□□ -1.52
NMD4YLR363C ASK10P48361 1146 aa5.58□□□□□ -1.52
NMD4YLR363C YNL034WP53963 612 aa5.58□□□□□ -1.52
NMD4YLR363C UBP16Q02863 499 aa5.58□□□□□ -1.52
NMD4YLR363C ENT2Q05785 613 aa5.58□□□□□ -1.52
NMD4YLR363C ADH4P10127 382 aa5.57□□□□□ -1.52
NMD4YLR363C PRD1P25375 712 aa5.57□□□□□ -1.52
NMD4YLR363C LAS21P40367 830 aa5.57□□□□□ -1.52
NMD4YLR363C YNL092WP53934 400 aa5.57□□□□□ -1.52
NMD4YLR363C TGL2P54857 326 aa5.57□□□□□ -1.52
NMD4YLR363C SND1Q04007 877 aa5.57□□□□□ -1.52
NMD4YLR363C TMA7Q3E764 64 aaKnown RBP5.57□□□□□ -1.52
NMD4YLR363C YJU2P28320 278 aaPredicted RBP5.56□□□□□ -1.52
NMD4YLR363C FRD1P32614 470 aaKnown RBP5.56□□□□□ -1.52
NMD4YLR363C TOM20P35180 183 aa5.56□□□□□ -1.52
NMD4YLR363C TRS31Q03337 283 aa5.56□□□□□ -1.52
NMD4YLR363C BSP1Q06604 576 aa5.56□□□□□ -1.52
NMD4YLR363C RDL1Q12305 139 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms