RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W UBX6P47049 396 aa3.95□□□□□ -1.78
VPS38YLR360W NPA3P47122 385 aa3.95□□□□□ -1.78
VPS38YLR360W RAD34Q06665 692 aa3.95□□□□□ -1.78
VPS38YLR360W YPL191CQ08930 360 aa3.95□□□□□ -1.78
VPS38YLR360W RRP6Q12149 733 aaKnown RBP3.95□□□□□ -1.78
VPS38YLR360W RGT2Q12300 763 aa3.95□□□□□ -1.78
VPS38YLR360W RVB2Q12464 471 aaKnown RBP3.95□□□□□ -1.78
VPS38YLR360W COX1P00401 534 aa3.95□□□□□ -1.78
VPS38YLR360W PHO81P17442 1178 aa3.95□□□□□ -1.78
VPS38YLR360W ARP2P32381 391 aaKnown RBP3.95□□□□□ -1.78
VPS38YLR360W GCD7P32502 381 aaPredicted RBP3.95□□□□□ -1.78
VPS38YLR360W SPC72P39723 622 aa3.95□□□□□ -1.78
VPS38YLR360W NOP2P40991 618 aaKnown RBP3.95□□□□□ -1.78
VPS38YLR360W CPR6P53691 371 aaKnown RBP3.95□□□□□ -1.78
VPS38YLR360W LYS21Q12122 440 aaKnown RBP3.95□□□□□ -1.78
VPS38YLR360W CRC1Q12289 327 aa3.95□□□□□ -1.78
VPS38YLR360W PET122P10355 254 aa3.94□□□□□ -1.78
VPS38YLR360W PTC6P25646 442 aa3.94□□□□□ -1.78
VPS38YLR360W FLO5P38894 1075 aa3.94□□□□□ -1.78
VPS38YLR360W JHD1P40034 492 aa3.94□□□□□ -1.78
VPS38YLR360W FAF1P40546 346 aaPredicted RBP3.94□□□□□ -1.78
VPS38YLR360W TAM41P53230 385 aa3.94□□□□□ -1.78
VPS38YLR360W YGR079WP53249 370 aa3.94□□□□□ -1.78
VPS38YLR360W EIS1Q05050 843 aaKnown RBP3.94□□□□□ -1.78
VPS38YLR360W SUL2Q12325 893 aa3.94□□□□□ -1.78
VPS38YLR360W CLB4P24871 460 aa3.93□□□□□ -1.78
VPS38YLR360W COQ3P27680 312 aa3.93□□□□□ -1.78
VPS38YLR360W LAC1P28496 418 aa3.93□□□□□ -1.78
VPS38YLR360W GSH1P32477 678 aa3.93□□□□□ -1.78
VPS38YLR360W ECM32P32644 1121 aaKnown RBP3.93□□□□□ -1.78
VPS38YLR360W ERV46P39727 415 aa3.93□□□□□ -1.78
VPS38YLR360W YIL024CP40543 189 aa3.93□□□□□ -1.78
VPS38YLR360W MNT3P40549 630 aa3.93□□□□□ -1.78
VPS38YLR360W COP1P53622 1201 aaKnown RBP3.93□□□□□ -1.78
VPS38YLR360W YDR109CQ04585 715 aa3.93□□□□□ -1.78
VPS38YLR360W URK1P27515 501 aa3.92□□□□□ -1.78
VPS38YLR360W PUG1P40100 303 aa3.92□□□□□ -1.78
VPS38YLR360W ZAP1P47043 880 aa3.92□□□□□ -1.78
VPS38YLR360W MTG1Q03151 367 aaPredicted RBP3.92□□□□□ -1.78
VPS38YLR360W LEA1Q08963 238 aaPredicted RBP3.92□□□□□ -1.78
VPS38YLR360W MSS51P32335 436 aa3.91□□□□□ -1.78
VPS38YLR360W HES1P35843 434 aa3.91□□□□□ -1.78
VPS38YLR360W YBR138CP38277 524 aa3.91□□□□□ -1.78
VPS38YLR360W FSH1P38777 243 aaKnown RBP3.91□□□□□ -1.78
VPS38YLR360W YJR008WP47085 338 aa3.91□□□□□ -1.78
VPS38YLR360W ORC5P50874 479 aa3.91□□□□□ -1.78
VPS38YLR360W IMA1P53051 589 aa3.91□□□□□ -1.78
VPS38YLR360W PAP2P53632 584 aaKnown RBP3.91□□□□□ -1.78
VPS38YLR360W MPS1P54199 764 aa3.91□□□□□ -1.78
VPS38YLR360W STP3Q05937 343 aa3.91□□□□□ -1.78
VPS38YLR360W GEP3Q08622 556 aa3.91□□□□□ -1.78
VPS38YLR360W PFA4Q12006 378 aa3.91□□□□□ -1.78
VPS38YLR360W UBP7P40453 1071 aa3.9□□□□□ -1.79
VPS38YLR360W CFD1P40558 293 aa3.9□□□□□ -1.79
VPS38YLR360W YPR003CP53394 754 aa3.9□□□□□ -1.79
VPS38YLR360W THI3Q07471 609 aa3.9□□□□□ -1.79
VPS38YLR360W HER1Q12276 1246 aa3.9□□□□□ -1.79
VPS38YLR360W YPR089WO13585 888 aa3.89□□□□□ -1.79
VPS38YLR360W GAL4P04386 881 aa3.89□□□□□ -1.79
VPS38YLR360W APA1P16550 321 aaKnown RBP3.89□□□□□ -1.79
VPS38YLR360W RPT3P33298 428 aaKnown RBP3.89□□□□□ -1.79
VPS38YLR360W SCO2P38072 301 aa3.89□□□□□ -1.79
VPS38YLR360W ACA1P39970 489 aa3.89□□□□□ -1.79
VPS38YLR360W PSF2P40359 213 aa3.89□□□□□ -1.79
VPS38YLR360W SCW4P53334 386 aaKnown RBP3.89□□□□□ -1.79
VPS38YLR360W TRS130Q03660 1102 aa3.89□□□□□ -1.79
VPS38YLR360W GTB1Q04924 702 aa3.89□□□□□ -1.79
VPS38YLR360W BIK1P11709 440 aa3.88□□□□□ -1.79
VPS38YLR360W RFA2P26754 273 aaKnown RBP3.88□□□□□ -1.79
VPS38YLR360W YMR124WP39523 943 aaKnown RBP3.88□□□□□ -1.79
VPS38YLR360W RPT2P40327 437 aaKnown RBP3.88□□□□□ -1.79
VPS38YLR360W PCI8P40512 444 aa3.88□□□□□ -1.79
VPS38YLR360W UBX4P54730 416 aa3.88□□□□□ -1.79
VPS38YLR360W GET3Q12154 354 aaKnown RBP3.88□□□□□ -1.79
VPS38YLR360W NUC1P08466 329 aa3.87□□□□□ -1.79
VPS38YLR360W SUI3P09064 285 aaKnown RBP3.87□□□□□ -1.79
VPS38YLR360W PGI1P12709 554 aaKnown RBP3.87□□□□□ -1.79
VPS38YLR360W NCP1P16603 691 aaKnown RBP3.87□□□□□ -1.79
VPS38YLR360W NUP120P35729 1037 aa3.87□□□□□ -1.79
VPS38YLR360W MRPL36P36531 177 aa3.87□□□□□ -1.79
VPS38YLR360W SPC97P38863 823 aa3.87□□□□□ -1.79
VPS38YLR360W BUD16P39988 312 aa3.87□□□□□ -1.79
VPS38YLR360W ERR3P42222 437 aa3.87□□□□□ -1.79
VPS38YLR360W YJL107CP42947 387 aa3.87□□□□□ -1.79
VPS38YLR360W YRB30P53107 440 aaPredicted RBP3.87□□□□□ -1.79
VPS38YLR360W MRPL1Q04599 285 aa3.87□□□□□ -1.79
VPS38YLR360W ECM22Q05958 814 aaPredicted RBP3.87□□□□□ -1.79
VPS38YLR360W PDR8Q06149 701 aa3.87□□□□□ -1.79
VPS38YLR360W RRI1Q12468 440 aa3.87□□□□□ -1.79
VPS38YLR360W ATP2P00830 511 aaKnown RBP3.86□□□□□ -1.79
VPS38YLR360W YER190C-BP0CX94 160 aa3.86□□□□□ -1.79
VPS38YLR360W YEL077W-AP0CX95 160 aa3.86□□□□□ -1.79
VPS38YLR360W YGR296C-BP0CX96 160 aa3.86□□□□□ -1.79
VPS38YLR360W YPL283W-BP0CX97 160 aa3.86□□□□□ -1.79
VPS38YLR360W YPR204C-AP0CX98 160 aa3.86□□□□□ -1.79
VPS38YLR360W MSM1P22438 575 aa3.86□□□□□ -1.79
VPS38YLR360W MGM1P32266 881 aa3.86□□□□□ -1.79
VPS38YLR360W ASK1P35734 292 aa3.86□□□□□ -1.79
VPS38YLR360W ARN1P38731 627 aa3.86□□□□□ -1.79
VPS38YLR360W DJP1P40564 432 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms