RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C DPB3P27344 201 aa2.37□□□□□ -2.03
SGD1YLR336C SAE2P46946 345 aa2.37□□□□□ -2.03
SGD1YLR336C TAX4P47030 604 aa2.37□□□□□ -2.03
SGD1YLR336C COG2P53271 262 aa2.37□□□□□ -2.03
SGD1YLR336C MTG1Q03151 367 aaPredicted RBP2.37□□□□□ -2.03
SGD1YLR336C OSW1Q08692 278 aa2.37□□□□□ -2.03
SGD1YLR336C NEW1Q08972 1196 aaKnown RBP2.37□□□□□ -2.03
SGD1YLR336C RTC1Q08281 1341 aa2.37□□□□□ -2.03
SGD1YLR336C SES1P07284 462 aaKnown RBP2.37□□□□□ -2.03
SGD1YLR336C TY2A-LR1P0C2J4 438 aa2.37□□□□□ -2.03
SGD1YLR336C TY2A-FP0CX61 438 aa2.37□□□□□ -2.03
SGD1YLR336C TY2A-GR2P0CX62 438 aa2.37□□□□□ -2.03
SGD1YLR336C TY2A-CP25383 438 aa2.37□□□□□ -2.03
SGD1YLR336C PEX2P32800 271 aa2.37□□□□□ -2.03
SGD1YLR336C MRPL36P36531 177 aa2.37□□□□□ -2.03
SGD1YLR336C PSD1P39006 500 aa2.37□□□□□ -2.03
SGD1YLR336C LAS21P40367 830 aa2.37□□□□□ -2.03
SGD1YLR336C YJL043WP47053 257 aa2.37□□□□□ -2.03
SGD1YLR336C CSL4P53859 292 aaPredicted RBP2.37□□□□□ -2.03
SGD1YLR336C TY2A-DR2Q03483 438 aa2.37□□□□□ -2.03
SGD1YLR336C GTB1Q04924 702 aa2.37□□□□□ -2.03
SGD1YLR336C TY2A-BQ12260 438 aa2.37□□□□□ -2.03
SGD1YLR336C TY2A-OR2Q12293 438 aa2.37□□□□□ -2.03
SGD1YLR336C TY2A-DR1Q12392 438 aa2.37□□□□□ -2.03
SGD1YLR336C TY2A-OR1Q12439 438 aa2.37□□□□□ -2.03
SGD1YLR336C TY2A-DR3Q99303 438 aa2.37□□□□□ -2.03
SGD1YLR336C TPK1P06244 397 aa2.36□□□□□ -2.03
SGD1YLR336C YSP3P25036 478 aa2.36□□□□□ -2.03
SGD1YLR336C GCD7P32502 381 aaPredicted RBP2.36□□□□□ -2.03
SGD1YLR336C RPC34P32910 317 aa2.36□□□□□ -2.03
SGD1YLR336C SWE1P32944 819 aa2.36□□□□□ -2.03
SGD1YLR336C RRN3P36070 627 aa2.36□□□□□ -2.03
SGD1YLR336C YER010CP40011 234 aa2.36□□□□□ -2.03
SGD1YLR336C SKP2P42843 763 aa2.36□□□□□ -2.03
SGD1YLR336C MEP3P53390 489 aa2.36□□□□□ -2.03
SGD1YLR336C TMA16Q08687 178 aa2.36□□□□□ -2.03
SGD1YLR336C YMR084WA2P2R3 262 aa2.36□□□□□ -2.03
SGD1YLR336C SSH4P32343 579 aa2.36□□□□□ -2.03
SGD1YLR336C MCM10P32354 571 aa2.36□□□□□ -2.03
SGD1YLR336C SIP1P32578 815 aa2.36□□□□□ -2.03
SGD1YLR336C SLC1P33333 303 aa2.36□□□□□ -2.03
SGD1YLR336C KES1P35844 434 aaKnown RBP2.36□□□□□ -2.03
SGD1YLR336C RPF2P36160 344 aaKnown RBP2.36□□□□□ -2.03
SGD1YLR336C VBA2P38358 474 aaKnown RBP2.36□□□□□ -2.03
SGD1YLR336C RAD26P40352 1085 aa2.36□□□□□ -2.03
SGD1YLR336C UBP7P40453 1071 aa2.36□□□□□ -2.03
SGD1YLR336C RAD34Q06665 692 aa2.36□□□□□ -2.03
SGD1YLR336C GSY2P27472 705 aa2.35□□□□□ -2.03
SGD1YLR336C RAD16P31244 790 aa2.35□□□□□ -2.03
SGD1YLR336C SWC3P31376 625 aa2.35□□□□□ -2.03
SGD1YLR336C HES1P35843 434 aa2.35□□□□□ -2.03
SGD1YLR336C IMD2P38697 523 aaKnown RBP2.35□□□□□ -2.03
SGD1YLR336C OPT1P40897 799 aa2.35□□□□□ -2.03
SGD1YLR336C IMD3P50095 523 aaKnown RBP2.35□□□□□ -2.03
SGD1YLR336C YNR061CP53747 219 aa2.35□□□□□ -2.03
SGD1YLR336C SNO4Q04902 237 aa2.35□□□□□ -2.03
SGD1YLR336C YDL121CQ07541 149 aa2.35□□□□□ -2.03
SGD1YLR336C SLK19Q08581 821 aaKnown RBP2.35□□□□□ -2.03
SGD1YLR336C HSP33Q08914 237 aaKnown RBP2.35□□□□□ -2.03
SGD1YLR336C YPL191CQ08930 360 aa2.35□□□□□ -2.03
SGD1YLR336C HSP32Q08992 237 aa2.35□□□□□ -2.03
SGD1YLR336C MAK32P23060 363 aa2.35□□□□□ -2.03
SGD1YLR336C LRE1P25579 583 aaKnown RBP2.35□□□□□ -2.03
SGD1YLR336C GSH1P32477 678 aa2.35□□□□□ -2.03
SGD1YLR336C HOT13P36078 116 aa2.35□□□□□ -2.03
SGD1YLR336C DPH1P40487 425 aaKnown RBP2.35□□□□□ -2.03
SGD1YLR336C MSY1P48527 492 aa2.35□□□□□ -2.03
SGD1YLR336C YAT1P80235 687 aa2.35□□□□□ -2.03
SGD1YLR336C REG1Q00816 1014 aa2.35□□□□□ -2.03
SGD1YLR336C SWT1Q12104 458 aa2.35□□□□□ -2.03
SGD1YLR336C FRE7Q12333 620 aa2.35□□□□□ -2.03
SGD1YLR336C YOL087CQ99247 1116 aa2.35□□□□□ -2.03
SGD1YLR336C PCT1P13259 424 aa2.34□□□□□ -2.03
SGD1YLR336C PFK2P16862 959 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
SGD1YLR336C CBF2P32504 956 aa2.34□□□□□ -2.03
SGD1YLR336C TEF4P36008 412 aaKnown RBP2.34□□□□□ -2.03
SGD1YLR336C UME6P39001 836 aa2.34□□□□□ -2.03
SGD1YLR336C FUN12P39730 1002 aaKnown RBP2.34□□□□□ -2.03
SGD1YLR336C KAP123P40069 1113 aaKnown RBP2.34□□□□□ -2.03
SGD1YLR336C FMP10P40098 244 aa2.34□□□□□ -2.03
SGD1YLR336C YDR109CQ04585 715 aa2.34□□□□□ -2.03
SGD1YLR336C RDL1Q12305 139 aaKnown RBP2.34□□□□□ -2.03
SGD1YLR336C YLR111WQ12528 110 aa2.34□□□□□ -2.03
SGD1YLR336C ERG8P24521 451 aa2.34□□□□□ -2.03
SGD1YLR336C RER1P25560 188 aa2.34□□□□□ -2.03
SGD1YLR336C ILV6P25605 309 aaKnown RBP2.34□□□□□ -2.03
SGD1YLR336C LAC1P28496 418 aa2.34□□□□□ -2.03
SGD1YLR336C NUP120P35729 1037 aa2.34□□□□□ -2.03
SGD1YLR336C ERV46P39727 415 aa2.34□□□□□ -2.03
SGD1YLR336C IST3P40565 148 aaPredicted RBP2.34□□□□□ -2.03
SGD1YLR336C YPR003CP53394 754 aa2.34□□□□□ -2.03
SGD1YLR336C CBK1P53894 756 aa2.34□□□□□ -2.03
SGD1YLR336C ATG23Q06671 453 aa2.34□□□□□ -2.03
SGD1YLR336C VCX1Q99385 411 aa2.34□□□□□ -2.03
SGD1YLR336C TAD3Q9URQ3 322 aa2.34□□□□□ -2.03
SGD1YLR336C ERG11P10614 530 aa2.33□□□□□ -2.04
SGD1YLR336C PTC6P25646 442 aa2.33□□□□□ -2.04
SGD1YLR336C CNS1P33313 385 aa2.33□□□□□ -2.04
SGD1YLR336C RIC1P40395 1056 aa2.33□□□□□ -2.04
SGD1YLR336C CIR1P42940 261 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms