RNA–Protein interactions for RNA: YGR278W

CWC22, Transcript of Spliceosome-associated protein that is required for pre-mRNA splicing, yeast

Gene CWC22, Length 1,734 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWC22	YGR278W	COX17	Q12287	69 aa		3.01	□□□□□ -1.93
CWC22	YGR278W	PET111	P08468	800 aa		3	□□□□□ -1.93
CWC22	YGR278W	BIK1	P11709	440 aa		3	□□□□□ -1.93
CWC22	YGR278W	RED1	P14291	827 aa		3	□□□□□ -1.93
CWC22	YGR278W	GLK1	P17709	500 aa	Known RBP	3	□□□□□ -1.93
CWC22	YGR278W	YCR061W	P25639	631 aa		3	□□□□□ -1.93
CWC22	YGR278W	DPH2	P32461	534 aa		3	□□□□□ -1.93
CWC22	YGR278W	GPD2	P41911	440 aa	Known RBP	3	□□□□□ -1.93
CWC22	YGR278W	SGM1	P47166	707 aa		3	□□□□□ -1.93
CWC22	YGR278W	DAK1	P54838	584 aa	Known RBP	3	□□□□□ -1.93
CWC22	YGR278W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
CWC22	YGR278W	MFM1	Q02783	413 aa		3	□□□□□ -1.93
CWC22	YGR278W	UFO1	Q04511	668 aa		3	□□□□□ -1.93
CWC22	YGR278W	SNO4	Q04902	237 aa		3	□□□□□ -1.93
CWC22	YGR278W	CRF1	Q04930	467 aa		3	□□□□□ -1.93
CWC22	YGR278W	YLH47	Q06493	454 aa		3	□□□□□ -1.93
CWC22	YGR278W	SDH5	Q08230	162 aa		3	□□□□□ -1.93
CWC22	YGR278W	CLP1	Q08685	445 aa	Predicted RBP	3	□□□□□ -1.93
CWC22	YGR278W	HSP33	Q08914	237 aa	Known RBP	3	□□□□□ -1.93
CWC22	YGR278W	PCL8	Q08966	492 aa		3	□□□□□ -1.93
CWC22	YGR278W	HSP32	Q08992	237 aa		3	□□□□□ -1.93
CWC22	YGR278W	PNO1	Q99216	274 aa	Known RBP	3	□□□□□ -1.93
CWC22	YGR278W	SEC12	P11655	471 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	AMD2	P22580	549 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	RPL5	P26321	297 aa	Known RBP	2.99	□□□□□ -1.93
CWC22	YGR278W	CNE1	P27825	502 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	GEX2	P36173	615 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	PMT6	P42934	759 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	MSE1	P48525	536 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	OCA1	P50946	238 aa	Predicted RBP	2.99	□□□□□ -1.93
CWC22	YGR278W	YAP1802	P53309	568 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	ZDS2	P54786	942 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	SSL2	Q00578	843 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	PUS9	Q12069	462 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	HNM1	P19807	563 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	POL4	P25615	582 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	CAP1	P28495	268 aa	Known RBP	2.99	□□□□□ -1.93
CWC22	YGR278W	CDC5	P32562	705 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	XRS2	P33301	854 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	SLC1	P33333	303 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	YMC2	P38087	329 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	SDH8	P38345	138 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	YHL017W	P38745	532 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	FSH1	P38777	243 aa	Known RBP	2.99	□□□□□ -1.93
CWC22	YGR278W	FUN12	P39730	1002 aa	Known RBP	2.99	□□□□□ -1.93
CWC22	YGR278W	YER010C	P40011	234 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	YIL166C	P40445	542 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	IDS2	P46958	469 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	YNR061C	P53747	219 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	YDR179W-A	Q03983	463 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	YMR111C	Q04461	462 aa	Predicted RBP	2.99	□□□□□ -1.93
CWC22	YGR278W	ARV1	Q06541	321 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	CSR1	Q06705	408 aa	Known RBP	2.99	□□□□□ -1.93
CWC22	YGR278W	VAM6	Q07468	1049 aa		2.99	□□□□□ -1.93
CWC22	YGR278W	RUD3	Q12234	484 aa	Known RBP	2.99	□□□□□ -1.93
CWC22	YGR278W	STF1	P01098	86 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	RPC40	P07703	335 aa	Known RBP	2.98	□□□□□ -1.93
CWC22	YGR278W	PET122	P10355	254 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	YPK1	P12688	680 aa	Known RBP	2.98	□□□□□ -1.93
CWC22	YGR278W	SPO16	P17122	198 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	PET123	P17558	318 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	SAN1	P22470	610 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	VPS34	P22543	875 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	SWC3	P31376	625 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	EMP70	P32802	667 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	ARC19	P33204	171 aa	Known RBP	2.98	□□□□□ -1.93
CWC22	YGR278W	APL3	P38065	1025 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	LRP1	P38801	184 aa	Known RBP	2.98	□□□□□ -1.93
CWC22	YGR278W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
CWC22	YGR278W	BUD16	P39988	312 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	JEM1	P40358	645 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	AIM20	P40451	204 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	IRC24	P40580	263 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	ZAP1	P47043	880 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	UPF3	P48412	387 aa	Known RBP	2.98	□□□□□ -1.93
CWC22	YGR278W	SAP4	P53036	818 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	SHE10	P53075	577 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	COG1	P53079	417 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	IMO32	P53219	342 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	NCS2	P53923	493 aa	Predicted RBP	2.98	□□□□□ -1.93
CWC22	YGR278W	CWC21	Q03375	135 aa	Known RBP	2.98	□□□□□ -1.93
CWC22	YGR278W	ARA2	Q04212	335 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	TAP42	Q04372	366 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	OPY2	Q06810	360 aa		2.98	□□□□□ -1.93
CWC22	YGR278W	PRS5	Q12265	496 aa	Known RBP	2.98	□□□□□ -1.93
CWC22	YGR278W	TUB2	P02557	457 aa	Known RBP	2.97	□□□□□ -1.93
CWC22	YGR278W	LEU2	P04173	364 aa	Predicted RBP	2.97	□□□□□ -1.93
CWC22	YGR278W	CTT1	P06115	562 aa		2.97	□□□□□ -1.93
CWC22	YGR278W	ABF1	P14164	731 aa		2.97	□□□□□ -1.93
CWC22	YGR278W	MER1	P16523	270 aa		2.97	□□□□□ -1.93
CWC22	YGR278W	AAC3	P18238	307 aa		2.97	□□□□□ -1.93
CWC22	YGR278W	FUR1	P18562	216 aa	Known RBP	2.97	□□□□□ -1.93
CWC22	YGR278W	DAL80	P26343	269 aa		2.97	□□□□□ -1.93
CWC22	YGR278W	URK1	P27515	501 aa		2.97	□□□□□ -1.93
CWC22	YGR278W	DHR2	P36009	735 aa	Predicted RBP	2.97	□□□□□ -1.93
CWC22	YGR278W	GMH1	P36125	273 aa		2.97	□□□□□ -1.93
CWC22	YGR278W	SRP72	P38688	640 aa	Known RBP	2.97	□□□□□ -1.93
CWC22	YGR278W	OTU2	P38747	307 aa	Known RBP	2.97	□□□□□ -1.93
CWC22	YGR278W	YEL068C	P39977	110 aa		2.97	□□□□□ -1.93
CWC22	YGR278W	RTT105	P40063	208 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms