RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C PXA1P41909 870 aa10.99□□□□□ -0.65
SPC25YER018C HST2P53686 357 aa10.99□□□□□ -0.65
SPC25YER018C SRV2P17555 526 aaKnown RBP10.98□□□□□ -0.65
SPC25YER018C ACO1P19414 778 aaKnown RBP RIP-Chip data10.98□□□□□ -0.65not detected
SPC25YER018C BET2P20133 325 aa10.98□□□□□ -0.65
SPC25YER018C DAL81P21657 970 aa10.98□□□□□ -0.65
SPC25YER018C MRPL8P22353 238 aa10.98□□□□□ -0.65
SPC25YER018C GGA2P38817 585 aaKnown RBP10.98□□□□□ -0.65
SPC25YER018C YHR131CP38835 850 aa10.98□□□□□ -0.65
SPC25YER018C EXO1P39875 702 aa10.98□□□□□ -0.65
SPC25YER018C IST3P40565 148 aaPredicted RBP10.98□□□□□ -0.65
SPC25YER018C CHS6P40955 746 aa10.98□□□□□ -0.65
SPC25YER018C BUD22Q04347 519 aaKnown RBP10.98□□□□□ -0.65
SPC25YER018C CMS1Q07897 291 aaKnown RBP10.98□□□□□ -0.65
SPC25YER018C PEX11Q12462 236 aa10.98□□□□□ -0.65
SPC25YER018C ERG20P08524 352 aaKnown RBP10.97□□□□□ -0.65
SPC25YER018C RBK1P25332 333 aa10.97□□□□□ -0.65
SPC25YER018C SGF29P25554 259 aa10.97□□□□□ -0.65
SPC25YER018C SRP101P32916 621 aa10.97□□□□□ -0.65
SPC25YER018C STR3P53101 465 aaKnown RBP10.97□□□□□ -0.65
SPC25YER018C YTP1P53584 459 aa10.97□□□□□ -0.65
SPC25YER018C TRS31Q03337 283 aa10.97□□□□□ -0.65
SPC25YER018C YHM2Q04013 314 aa10.97□□□□□ -0.65
SPC25YER018C FAR8Q05040 523 aa10.97□□□□□ -0.65
SPC25YER018C YSH1Q06224 779 aaPredicted RBP10.97□□□□□ -0.65
SPC25YER018C BUD20Q08004 166 aaPredicted RBP10.97□□□□□ -0.65
SPC25YER018C SLD7Q08457 257 aa10.97□□□□□ -0.65
SPC25YER018C DAP1Q12091 152 aa10.97□□□□□ -0.65
SPC25YER018C YLR046CQ12253 270 aa10.97□□□□□ -0.65
SPC25YER018C NCA2Q12374 616 aa10.97□□□□□ -0.65
SPC25YER018C SCH9P11792 824 aaKnown RBP10.96□□□□□ -0.65
SPC25YER018C REV1P12689 985 aa10.96□□□□□ -0.65
SPC25YER018C CLN1P20437 546 aa10.96□□□□□ -0.65
SPC25YER018C KIN3P22209 435 aa10.96□□□□□ -0.65
SPC25YER018C AAT2P23542 418 aaKnown RBP10.96□□□□□ -0.65
SPC25YER018C DCC1P25559 380 aa10.96□□□□□ -0.65
SPC25YER018C YCR051WP25631 222 aa10.96□□□□□ -0.65
SPC25YER018C IMG2P25642 146 aaPredicted RBP10.96□□□□□ -0.65
SPC25YER018C STE5P32917 917 aa10.96□□□□□ -0.65
SPC25YER018C DOT6P40059 670 aaKnown RBP10.96□□□□□ -0.65
SPC25YER018C ERG10P41338 398 aaKnown RBP10.96□□□□□ -0.65
SPC25YER018C AIM14P53109 570 aa10.96□□□□□ -0.65
SPC25YER018C NOP15P53927 220 aaPredicted RBP10.96□□□□□ -0.65
SPC25YER018C IMP4P53941 290 aaKnown RBP10.96□□□□□ -0.65
SPC25YER018C SFB2P53953 876 aa10.96□□□□□ -0.65
SPC25YER018C NHX1Q04121 633 aa10.96□□□□□ -0.65
SPC25YER018C YLR053CQ12026 108 aa10.96□□□□□ -0.65
SPC25YER018C KEX2P13134 814 aa10.95□□□□□ -0.66
SPC25YER018C GEX1P25596 615 aa10.95□□□□□ -0.66
SPC25YER018C PPZ1P26570 692 aa10.95□□□□□ -0.66
SPC25YER018C GDA1P32621 518 aa10.95□□□□□ -0.66
SPC25YER018C SWE1P32944 819 aa10.95□□□□□ -0.66
SPC25YER018C YKL097CP34245 136 aa10.95□□□□□ -0.66
SPC25YER018C GEX2P36173 615 aa10.95□□□□□ -0.66
SPC25YER018C CRP1P38845 465 aaKnown RBP10.95□□□□□ -0.66
SPC25YER018C VPS41P38959 992 aa10.95□□□□□ -0.66
SPC25YER018C RGI2P40188 164 aa10.95□□□□□ -0.66
SPC25YER018C TFG1P41895 735 aaPredicted RBP10.95□□□□□ -0.66
SPC25YER018C TRS85P46944 698 aa10.95□□□□□ -0.66
SPC25YER018C BIO4P53630 237 aa10.95□□□□□ -0.66
SPC25YER018C EFM6P53970 246 aa10.95□□□□□ -0.66
SPC25YER018C NUP100Q02629 959 aa10.95□□□□□ -0.66
SPC25YER018C RPN9Q04062 393 aaKnown RBP10.95□□□□□ -0.66
SPC25YER018C CDC123Q05791 360 aa10.95□□□□□ -0.66
SPC25YER018C YSP3P25036 478 aa10.94□□□□□ -0.66
SPC25YER018C MSH1P25846 959 aa10.94□□□□□ -0.66
SPC25YER018C KIP2P28743 706 aa10.94□□□□□ -0.66
SPC25YER018C MRP21P38175 177 aa10.94□□□□□ -0.66
SPC25YER018C YJL206CP39529 758 aa10.94□□□□□ -0.66
SPC25YER018C PAN6P40459 309 aa10.94□□□□□ -0.66
SPC25YER018C REF2P42073 533 aaPredicted RBP10.94□□□□□ -0.66
SPC25YER018C GYP8P43570 497 aa10.94□□□□□ -0.66
SPC25YER018C BUD13P46947 266 aaPredicted RBP10.94□□□□□ -0.66
SPC25YER018C AIM23P47015 356 aa10.94□□□□□ -0.66
SPC25YER018C CSN12P47130 423 aa10.94□□□□□ -0.66
SPC25YER018C SAP4P53036 818 aa10.94□□□□□ -0.66
SPC25YER018C VEL1P53058 206 aa10.94□□□□□ -0.66
SPC25YER018C YNR065CP53751 1116 aa10.94□□□□□ -0.66
SPC25YER018C SLT2Q00772 484 aa10.94□□□□□ -0.66
SPC25YER018C PIR1Q03178 341 aa10.94□□□□□ -0.66
SPC25YER018C GSF2Q04697 403 aaKnown RBP10.94□□□□□ -0.66
SPC25YER018C TRE2Q08693 809 aa10.94□□□□□ -0.66
SPC25YER018C YEL077CQ3E7X8 1277 aa10.94□□□□□ -0.66
SPC25YER018C INO1P11986 533 aa10.93□□□□□ -0.66
SPC25YER018C ATP12P22135 325 aa10.93□□□□□ -0.66
SPC25YER018C PUP3P25451 205 aaKnown RBP10.93□□□□□ -0.66
SPC25YER018C LIP5P32875 414 aa10.93□□□□□ -0.66
SPC25YER018C TYE7P33122 291 aaPredicted RBP10.93□□□□□ -0.66
SPC25YER018C SLD2P34252 453 aa10.93□□□□□ -0.66
SPC25YER018C SQT1P35184 431 aa10.93□□□□□ -0.66
SPC25YER018C SET3P36124 751 aa10.93□□□□□ -0.66
SPC25YER018C DUN1P39009 513 aa10.93□□□□□ -0.66
SPC25YER018C SSP120P39931 234 aaKnown RBP10.93□□□□□ -0.66
SPC25YER018C YGL140CP53120 1219 aa10.93□□□□□ -0.66
SPC25YER018C UBX4P54730 416 aa10.93□□□□□ -0.66
SPC25YER018C RSB1Q08417 382 aa10.93□□□□□ -0.66
SPC25YER018C RPS14AP06367 137 aaKnown RBP10.92□□□□□ -0.66
SPC25YER018C NSP1P14907 823 aaKnown RBP10.92□□□□□ -0.66
SPC25YER018C HSP26P15992 214 aaKnown RBP RIP-Chip data10.92□□□□□ -0.66not detected
SPC25YER018C SEC14P24280 304 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 68 ms