RNA–Protein interactions for RNA: YDR398W

UTP5, Transcript of Subunit of U3-containing Small Subunit (SSU) processome complex, yeast

Gene UTP5, Length 1,932 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP5	YDR398W	YOR389W	Q08912	624 aa		4.09	□□□□□ -1.76
UTP5	YDR398W	SUL2	Q12325	893 aa		4.09	□□□□□ -1.76
UTP5	YDR398W	PET122	P10355	254 aa		4.08	□□□□□ -1.76
UTP5	YDR398W	PHO81	P17442	1178 aa		4.08	□□□□□ -1.76
UTP5	YDR398W	ARP2	P32381	391 aa	Known RBP	4.08	□□□□□ -1.76
UTP5	YDR398W	ECM32	P32644	1121 aa	Known RBP	4.08	□□□□□ -1.76
UTP5	YDR398W	SNM1	P40993	198 aa		4.08	□□□□□ -1.76
UTP5	YDR398W	YGR079W	P53249	370 aa		4.08	□□□□□ -1.76
UTP5	YDR398W	GTB1	Q04924	702 aa		4.08	□□□□□ -1.76
UTP5	YDR398W	CRC1	Q12289	327 aa		4.08	□□□□□ -1.76
UTP5	YDR398W	YMR085W	P0CF18	432 aa		4.07	□□□□□ -1.76
UTP5	YDR398W	URK1	P27515	501 aa		4.07	□□□□□ -1.76
UTP5	YDR398W	UBX4	P54730	416 aa		4.07	□□□□□ -1.76
UTP5	YDR398W	ICT1	Q12385	394 aa		4.07	□□□□□ -1.76
UTP5	YDR398W	ILV2	P07342	687 aa	Known RBP	4.07	□□□□□ -1.76
UTP5	YDR398W	ILS1	P09436	1072 aa	Known RBP	4.07	□□□□□ -1.76
UTP5	YDR398W	GSH1	P32477	678 aa		4.07	□□□□□ -1.76
UTP5	YDR398W	TMT1	P32643	299 aa		4.07	□□□□□ -1.76
UTP5	YDR398W	YBR138C	P38277	524 aa		4.07	□□□□□ -1.76
UTP5	YDR398W	FSH1	P38777	243 aa	Known RBP	4.07	□□□□□ -1.76
UTP5	YDR398W	FUN12	P39730	1002 aa	Known RBP	4.07	□□□□□ -1.76
UTP5	YDR398W	PUG1	P40100	303 aa		4.07	□□□□□ -1.76
UTP5	YDR398W	RVB2	Q12464	471 aa	Known RBP	4.07	□□□□□ -1.76
UTP5	YDR398W	COX1	P00401	534 aa		4.06	□□□□□ -1.76
UTP5	YDR398W	YAP1	P19880	650 aa	Known RBP	4.06	□□□□□ -1.76
UTP5	YDR398W	COQ3	P27680	312 aa		4.06	□□□□□ -1.76
UTP5	YDR398W	LAC1	P28496	418 aa		4.06	□□□□□ -1.76
UTP5	YDR398W	HES1	P35843	434 aa		4.06	□□□□□ -1.76
UTP5	YDR398W	ERV46	P39727	415 aa		4.06	□□□□□ -1.76
UTP5	YDR398W	ACA1	P39970	489 aa		4.06	□□□□□ -1.76
UTP5	YDR398W	UBP7	P40453	1071 aa		4.06	□□□□□ -1.76
UTP5	YDR398W	YJR008W	P47085	338 aa		4.06	□□□□□ -1.76
UTP5	YDR398W	PTC6	P25646	442 aa		4.05	□□□□□ -1.76
UTP5	YDR398W	BUD16	P39988	312 aa		4.05	□□□□□ -1.76
UTP5	YDR398W	RPT2	P40327	437 aa	Known RBP	4.05	□□□□□ -1.76
UTP5	YDR398W	SKP2	P42843	763 aa		4.05	□□□□□ -1.76
UTP5	YDR398W	GAT1	P43574	510 aa		4.05	□□□□□ -1.76
UTP5	YDR398W	YRB30	P53107	440 aa	Predicted RBP	4.05	□□□□□ -1.76
UTP5	YDR398W	MTG1	Q03151	367 aa	Predicted RBP	4.05	□□□□□ -1.76
UTP5	YDR398W	IOC4	Q04213	475 aa		4.05	□□□□□ -1.76
UTP5	YDR398W	LEA1	Q08963	238 aa	Predicted RBP	4.05	□□□□□ -1.76
UTP5	YDR398W	GET3	Q12154	354 aa	Known RBP	4.05	□□□□□ -1.76
UTP5	YDR398W	RGT2	Q12300	763 aa		4.05	□□□□□ -1.76
UTP5	YDR398W	CLB4	P24871	460 aa		4.05	□□□□□ -1.76
UTP5	YDR398W	MNT3	P40549	630 aa		4.05	□□□□□ -1.76
UTP5	YDR398W	COP1	P53622	1201 aa	Known RBP	4.05	□□□□□ -1.76
UTP5	YDR398W	TRS130	Q03660	1102 aa		4.05	□□□□□ -1.76
UTP5	YDR398W	PGI1	P12709	554 aa	Known RBP	4.04	□□□□□ -1.76
UTP5	YDR398W	GCD7	P32502	381 aa	Predicted RBP	4.04	□□□□□ -1.76
UTP5	YDR398W	YIL024C	P40543	189 aa		4.04	□□□□□ -1.76
UTP5	YDR398W	CFD1	P40558	293 aa		4.04	□□□□□ -1.76
UTP5	YDR398W	ZAP1	P47043	880 aa		4.04	□□□□□ -1.76
UTP5	YDR398W	UBX6	P47049	396 aa		4.04	□□□□□ -1.76
UTP5	YDR398W	SEC5	P89102	971 aa		4.04	□□□□□ -1.76
UTP5	YDR398W	YAP7	Q08182	245 aa		4.04	□□□□□ -1.76
UTP5	YDR398W	APA1	P16550	321 aa	Known RBP	4.03	□□□□□ -1.76
UTP5	YDR398W	MSM1	P22438	575 aa		4.03	□□□□□ -1.76
UTP5	YDR398W	JHD1	P40034	492 aa		4.03	□□□□□ -1.76
UTP5	YDR398W	FAF1	P40546	346 aa	Predicted RBP	4.03	□□□□□ -1.76
UTP5	YDR398W	CIA1	Q05583	330 aa		4.03	□□□□□ -1.76
UTP5	YDR398W	THI3	Q07471	609 aa		4.03	□□□□□ -1.76
UTP5	YDR398W	NCP1	P16603	691 aa	Known RBP	4.03	□□□□□ -1.76
UTP5	YDR398W	TPM2	P40414	161 aa		4.03	□□□□□ -1.76
UTP5	YDR398W	ERR3	P42222	437 aa		4.03	□□□□□ -1.76
UTP5	YDR398W	ORC5	P50874	479 aa		4.03	□□□□□ -1.76
UTP5	YDR398W	YDR109C	Q04585	715 aa		4.03	□□□□□ -1.76
UTP5	YDR398W	ATG23	Q06671	453 aa		4.03	□□□□□ -1.76
UTP5	YDR398W	YCL049C	P25577	312 aa		4.02	□□□□□ -1.77
UTP5	YDR398W	MSY1	P48527	492 aa		4.02	□□□□□ -1.77
UTP5	YDR398W	VAM6	Q07468	1049 aa		4.02	□□□□□ -1.77
UTP5	YDR398W	GEP3	Q08622	556 aa		4.02	□□□□□ -1.77
UTP5	YDR398W	PFA4	Q12006	378 aa		4.02	□□□□□ -1.77
UTP5	YDR398W	BAG7	Q12128	409 aa		4.02	□□□□□ -1.77
UTP5	YDR398W	LRE1	P25579	583 aa	Known RBP	4.01	□□□□□ -1.77
UTP5	YDR398W	PHM8	P40025	321 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	PCI8	P40512	444 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	DJP1	P40564	432 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	ARC35	P53731	342 aa	Known RBP	4.01	□□□□□ -1.77
UTP5	YDR398W	STP3	Q05937	343 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	GAL4	P04386	881 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	YML003W	P0CF16	290 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	YER190C-B	P0CX94	160 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	YEL077W-A	P0CX95	160 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	YGR296C-B	P0CX96	160 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	YPL283W-B	P0CX97	160 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	YPR204C-A	P0CX98	160 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	NPR3	P38742	1146 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	SPC97	P38863	823 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	CDC1	P40986	491 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	YJL107C	P42947	387 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	YPR003C	P53394	754 aa		4.01	□□□□□ -1.77
UTP5	YDR398W	RFA2	P26754	273 aa	Known RBP	4	□□□□□ -1.77
UTP5	YDR398W	MSS51	P32335	436 aa		4	□□□□□ -1.77
UTP5	YDR398W	MRPL36	P36531	177 aa		4	□□□□□ -1.77
UTP5	YDR398W	ARN1	P38731	627 aa		4	□□□□□ -1.77
UTP5	YDR398W	YMR124W	P39523	943 aa	Known RBP	4	□□□□□ -1.77
UTP5	YDR398W	VTC3	Q02725	835 aa		4	□□□□□ -1.77
UTP5	YDR398W	BLS1	Q06071	122 aa		4	□□□□□ -1.77
UTP5	YDR398W	YPR089W	O13585	888 aa		3.99	□□□□□ -1.77
UTP5	YDR398W	PCT1	P13259	424 aa		3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms