RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT3	YDR394W	RIM11	P38615	370 aa		6.2	□□□□□ -1.42
RPT3	YDR394W	SKP2	P42843	763 aa		6.2	□□□□□ -1.42
RPT3	YDR394W	SAD1	P43589	448 aa		6.2	□□□□□ -1.42
RPT3	YDR394W	ALY2	P47029	1046 aa		6.2	□□□□□ -1.42
RPT3	YDR394W	DAK1	P54838	584 aa	Known RBP	6.2	□□□□□ -1.42
RPT3	YDR394W	SNU56	Q03782	492 aa	Known RBP	6.2	□□□□□ -1.42
RPT3	YDR394W	BSC2	Q05611	235 aa		6.2	□□□□□ -1.42
RPT3	YDR394W	YLR177W	Q06251	628 aa		6.2	□□□□□ -1.42
RPT3	YDR394W	DNL4	Q08387	944 aa	Predicted RBP	6.2	□□□□□ -1.42
RPT3	YDR394W	YLR053C	Q12026	108 aa		6.2	□□□□□ -1.42
RPT3	YDR394W	CMR1	Q12510	522 aa	Known RBP	6.2	□□□□□ -1.42
RPT3	YDR394W	YPT6	Q99260	215 aa		6.2	□□□□□ -1.42
RPT3	YDR394W	IZH4	Q99393	312 aa		6.2	□□□□□ -1.42
RPT3	YDR394W	ADE4	P04046	510 aa	Known RBP	6.19	□□□□□ -1.42
RPT3	YDR394W	VPS3	P23643	1011 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	GAC1	P28006	793 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	TOA1	P32773	286 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	FRE1	P32791	686 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	PEX2	P32800	271 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	HEL1	P36113	551 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	APN2	P38207	520 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	SHE3	P38272	425 aa	Known RBP	6.19	□□□□□ -1.42
RPT3	YDR394W	FZO1	P38297	855 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	AIM18	P38884	321 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	SIP5	P40210	489 aa	Known RBP	6.19	□□□□□ -1.42
RPT3	YDR394W	YJL107C	P42947	387 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	ASG7	P46993	209 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	PEX31	P53203	462 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	YGR283C	P53336	341 aa	Predicted RBP	6.19	□□□□□ -1.42
RPT3	YDR394W	NCE103	P53615	221 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	RCF2	P53721	224 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	YNL058C	P53947	316 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	ELP3	Q02908	557 aa	Known RBP	6.19	□□□□□ -1.42
RPT3	YDR394W	YPL109C	Q02981	657 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	SND1	Q04007	877 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	THI20	Q08224	551 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	YLR122C	Q12312	125 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	SPE4	Q12455	300 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	RTP1	Q12751	981 aa		6.19	□□□□□ -1.42
RPT3	YDR394W	RAD3	P06839	778 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	NPR1	P22211	790 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	TSR4	P25040	408 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	CDC20	P26309	610 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	STE13	P33894	931 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	HSL7	P38274	827 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	SAF1	P38352	637 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	SSP120	P39931	234 aa	Known RBP	6.18	□□□□□ -1.42
RPT3	YDR394W	ALD5	P40047	520 aa	Known RBP	6.18	□□□□□ -1.42
RPT3	YDR394W	PFK26	P40433	827 aa	Known RBP	6.18	□□□□□ -1.42
RPT3	YDR394W	MNN11	P46985	422 aa	Known RBP	6.18	□□□□□ -1.42
RPT3	YDR394W	PFD1	P46988	109 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	IML2	P47031	731 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	TAH11	P47112	604 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	PAN2	P53010	1115 aa	Predicted RBP	6.18	□□□□□ -1.42
RPT3	YDR394W	NNF2	P53253	936 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	BIO4	P53630	237 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	SLG1	P54867	378 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	MUK1	Q02866	612 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	MUB1	Q03162	620 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	RKM2	Q03942	479 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	GTB1	Q04924	702 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	YET3	Q07451	203 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	HOS1	Q12214	470 aa		6.18	□□□□□ -1.42
RPT3	YDR394W	RIB2	Q12362	591 aa	Known RBP	6.18	□□□□□ -1.42
RPT3	YDR394W	TEF1	P02994	458 aa	Known RBP	6.17	□□□□□ -1.42
RPT3	YDR394W	FLP1	P03870	423 aa		6.17	□□□□□ -1.42
RPT3	YDR394W	TPK1	P06244	397 aa		6.17	□□□□□ -1.42
RPT3	YDR394W	LRE1	P25579	583 aa	Known RBP	6.17	□□□□□ -1.42
RPT3	YDR394W	AAD3	P25612	363 aa		6.17	□□□□□ -1.42
RPT3	YDR394W	URA10	P30402	227 aa		6.17	□□□□□ -1.42
RPT3	YDR394W	YBP1	P38315	674 aa		6.17	□□□□□ -1.42
RPT3	YDR394W	RFC3	P38629	340 aa		6.17	□□□□□ -1.42
RPT3	YDR394W	YHL008C	P38750	627 aa		6.17	□□□□□ -1.42
RPT3	YDR394W	OAF1	P39720	1047 aa	Predicted RBP	6.17	□□□□□ -1.42
RPT3	YDR394W	AVT2	P39981	480 aa		6.17	□□□□□ -1.42
RPT3	YDR394W	RIO2	P40160	425 aa	Known RBP	6.17	□□□□□ -1.42
RPT3	YDR394W	ALT2	P52892	507 aa		6.17	□□□□□ -1.42
RPT3	YDR394W	VPS9	P54787	451 aa		6.17	□□□□□ -1.42
RPT3	YDR394W	TFB2	Q02939	513 aa		6.17	□□□□□ -1.42
RPT3	YDR394W	FMN1	Q03778	218 aa		6.17	□□□□□ -1.42
RPT3	YDR394W	GPN2	Q08726	347 aa	Predicted RBP	6.17	□□□□□ -1.42
RPT3	YDR394W	GNT1	Q12096	491 aa		6.17	□□□□□ -1.42
RPT3	YDR394W	NOT5	Q12514	560 aa	Predicted RBP	6.17	□□□□□ -1.42
RPT3	YDR394W	GAL80	P04387	435 aa		6.16	□□□□□ -1.42
RPT3	YDR394W	ERR1	P0CX10	437 aa		6.16	□□□□□ -1.42
RPT3	YDR394W	ERR2	P0CX11	437 aa		6.16	□□□□□ -1.42
RPT3	YDR394W	EXO70	P19658	623 aa		6.16	□□□□□ -1.42
RPT3	YDR394W	PWP1	P21304	576 aa	Known RBP	6.16	□□□□□ -1.42
RPT3	YDR394W	RSA4	P25382	515 aa	Known RBP	6.16	□□□□□ -1.42
RPT3	YDR394W	RPC19	P28000	142 aa	Known RBP	6.16	□□□□□ -1.42
RPT3	YDR394W	MCM5	P29496	775 aa	Known RBP	6.16	□□□□□ -1.42
RPT3	YDR394W	HXT3	P32466	567 aa	Known RBP	6.16	□□□□□ -1.42
RPT3	YDR394W	SSE1	P32589	693 aa	Known RBP	6.16	□□□□□ -1.42
RPT3	YDR394W	PEX5	P35056	612 aa		6.16	□□□□□ -1.42
RPT3	YDR394W	KES1	P35844	434 aa	Known RBP	6.16	□□□□□ -1.42
RPT3	YDR394W	KAE1	P36132	386 aa		6.16	□□□□□ -1.42
RPT3	YDR394W	YHL026C	P38740	315 aa		6.16	□□□□□ -1.42
RPT3	YDR394W	ERR3	P42222	437 aa		6.16	□□□□□ -1.42
RPT3	YDR394W	ARC1	P46672	376 aa	Known RBP	6.16	□□□□□ -1.42
RPT3	YDR394W	POL31	P46957	487 aa		6.16	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms