RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	VPS4	P52917	437 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	ZDS2	P54786	942 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	NGL2	Q03264	515 aa	Known RBP	3.03	□□□□□ -1.92
TFB1	YDR311W	YLR345W	Q06137	509 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	GET3	Q12154	354 aa	Known RBP	3.03	□□□□□ -1.92
TFB1	YDR311W	CBS1	P14066	229 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	POL4	P25615	582 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	DBF4	P32325	704 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	MVD1	P32377	396 aa	Known RBP	3.03	□□□□□ -1.92
TFB1	YDR311W	KTR3	P38130	404 aa	Predicted RBP	3.03	□□□□□ -1.92
TFB1	YDR311W	MUM2	P38236	366 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	FLC2	P39719	783 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	PFK26	P40433	827 aa	Known RBP	3.03	□□□□□ -1.92
TFB1	YDR311W	MPS3	P47069	682 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	LYS4	P49367	693 aa	Predicted RBP	3.03	□□□□□ -1.92
TFB1	YDR311W	MUP1	P50276	574 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	LCL3	P53153	274 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	YOR019W	Q99248	730 aa		3.03	□□□□□ -1.92
TFB1	YDR311W	LCB1	P25045	558 aa	Known RBP	3.02	□□□□□ -1.93
TFB1	YDR311W	YCR061W	P25639	631 aa		3.02	□□□□□ -1.93
TFB1	YDR311W	GCD7	P32502	381 aa	Predicted RBP	3.02	□□□□□ -1.93
TFB1	YDR311W	MRPL7	P36519	292 aa		3.02	□□□□□ -1.93
TFB1	YDR311W	TDP1	P38319	544 aa		3.02	□□□□□ -1.93
TFB1	YDR311W	SLZ1	P40167	298 aa		3.02	□□□□□ -1.93
TFB1	YDR311W	PIG2	P40187	538 aa		3.02	□□□□□ -1.93
TFB1	YDR311W	YIR042C	P40586	236 aa		3.02	□□□□□ -1.93
TFB1	YDR311W	SKP2	P42843	763 aa		3.02	□□□□□ -1.93
TFB1	YDR311W	AAD10	P47182	288 aa		3.02	□□□□□ -1.93
TFB1	YDR311W	AMA1	P50082	593 aa		3.02	□□□□□ -1.93
TFB1	YDR311W	PAN2	P53010	1115 aa	Predicted RBP	3.02	□□□□□ -1.93
TFB1	YDR311W	YGR016W	P53209	190 aa		3.02	□□□□□ -1.93
TFB1	YDR311W	IMO32	P53219	342 aa		3.02	□□□□□ -1.93
TFB1	YDR311W	MTG1	Q03151	367 aa	Predicted RBP	3.02	□□□□□ -1.93
TFB1	YDR311W	EFR3	Q03653	782 aa	Known RBP	3.02	□□□□□ -1.93
TFB1	YDR311W	CLU1	Q03690	1277 aa	Known RBP	3.02	□□□□□ -1.93
TFB1	YDR311W	RIX7	Q07844	837 aa	Known RBP	3.02	□□□□□ -1.93
TFB1	YDR311W	IZH3	Q07959	543 aa		3.02	□□□□□ -1.93
TFB1	YDR311W	TRM13	Q12383	476 aa		3.02	□□□□□ -1.93
TFB1	YDR311W	GRX6	Q12438	231 aa		3.02	□□□□□ -1.93
TFB1	YDR311W	SPE4	Q12455	300 aa		3.02	□□□□□ -1.93
TFB1	YDR311W	YLR358C	O13565	187 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	CPA2	P03965	1118 aa	Known RBP	3.01	□□□□□ -1.93
TFB1	YDR311W	PRP28	P23394	588 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	CAP1	P28495	268 aa	Known RBP	3.01	□□□□□ -1.93
TFB1	YDR311W	RPS0A	P32905	252 aa	Known RBP	3.01	□□□□□ -1.93
TFB1	YDR311W	LST4	P34239	828 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	ELF1	P36053	145 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	ARO9	P38840	513 aa	Predicted RBP	3.01	□□□□□ -1.93
TFB1	YDR311W	RTS1	P38903	757 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
TFB1	YDR311W	UBP7	P40453	1071 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	ASE1	P50275	885 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	SPT20	P50875	604 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	MUB1	Q03162	620 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	YDR286C	Q05530	114 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	SKG3	Q06315	1026 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	IRC13	Q08630	104 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	RCN2	Q12044	265 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	NUS1	Q12063	375 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	MLH3	Q12083	715 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	PRS5	Q12265	496 aa	Known RBP	3.01	□□□□□ -1.93
TFB1	YDR311W	NOP58	Q12499	511 aa	Known RBP	3.01	□□□□□ -1.93
TFB1	YDR311W	YML003W	P0CF16	290 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	VPS34	P22543	875 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	PRE8	P23639	250 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	OCA4	P25366	362 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	PHO11	P35842	467 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	AUR1	P36107	401 aa	Predicted RBP	3.01	□□□□□ -1.93
TFB1	YDR311W	MAL33	P38157	468 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	PHO12	P38693	467 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	YHR097C	P38809	366 aa	Known RBP	3.01	□□□□□ -1.93
TFB1	YDR311W	RGI2	P40188	164 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	YJL068C	P40363	299 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	GLO1	P50107	326 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	UBC11	P52492	156 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	SGF73	P53165	657 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	YGL036W	P53185	909 aa	Predicted RBP	3.01	□□□□□ -1.93
TFB1	YDR311W	SWT1	Q12104	458 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	SFI1	Q12369	946 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	ISA2	Q12425	185 aa		3.01	□□□□□ -1.93
TFB1	YDR311W	ERG27	Q12452	347 aa	Known RBP	3.01	□□□□□ -1.93
TFB1	YDR311W	TRP4	P07285	380 aa	Predicted RBP	3	□□□□□ -1.93
TFB1	YDR311W	CAF20	P12962	161 aa	Known RBP	3	□□□□□ -1.93
TFB1	YDR311W	DAL5	P15365	543 aa		3	□□□□□ -1.93
TFB1	YDR311W	SWC3	P31376	625 aa		3	□□□□□ -1.93
TFB1	YDR311W	SAS3	P34218	831 aa		3	□□□□□ -1.93
TFB1	YDR311W	GCS1	P35197	352 aa		3	□□□□□ -1.93
TFB1	YDR311W	UTP9	P38882	575 aa	Known RBP	3	□□□□□ -1.93
TFB1	YDR311W	ELO3	P40319	345 aa		3	□□□□□ -1.93
TFB1	YDR311W	JEM1	P40358	645 aa		3	□□□□□ -1.93
TFB1	YDR311W	DOT5	P40553	215 aa		3	□□□□□ -1.93
TFB1	YDR311W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
TFB1	YDR311W	IME4	P41833	600 aa		3	□□□□□ -1.93
TFB1	YDR311W	DLT1	Q04216	342 aa		3	□□□□□ -1.93
TFB1	YDR311W	ECM22	Q05958	814 aa	Predicted RBP	3	□□□□□ -1.93
TFB1	YDR311W	TPM1	P17536	199 aa	Known RBP	2.99	□□□□□ -1.93
TFB1	YDR311W	ADK2	P26364	225 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	RFA2	P26754	273 aa	Known RBP	2.99	□□□□□ -1.93
TFB1	YDR311W	GPI10	P30777	616 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	ANP1	P32629	500 aa		2.99	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms