RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C ASK10P48361 1146 aa3.3□□□□□ -1.88
SNU56YDR240C ESF2P53743 316 aaKnown RBP3.3□□□□□ -1.88
SNU56YDR240C ACS1Q01574 713 aa3.3□□□□□ -1.88
SNU56YDR240C SRL1Q08673 210 aa3.3□□□□□ -1.88
SNU56YDR240C BUD7Q08754 746 aa3.3□□□□□ -1.88
SNU56YDR240C UBX3Q12229 455 aa3.3□□□□□ -1.88
SNU56YDR240C SSB1P11484 613 aaKnown RBP3.29□□□□□ -1.88
SNU56YDR240C CNA1P23287 553 aa3.29□□□□□ -1.88
SNU56YDR240C PTC6P25646 442 aa3.29□□□□□ -1.88
SNU56YDR240C GSH1P32477 678 aa3.29□□□□□ -1.88
SNU56YDR240C ARN1P38731 627 aa3.29□□□□□ -1.88
SNU56YDR240C SSB2P40150 613 aaKnown RBP3.29□□□□□ -1.88
SNU56YDR240C YIR016WP40572 265 aa3.29□□□□□ -1.88
SNU56YDR240C LYS20P48570 428 aaKnown RBP3.29□□□□□ -1.88
SNU56YDR240C BOP3P53958 396 aa3.29□□□□□ -1.88
SNU56YDR240C LEA1Q08963 238 aaPredicted RBP3.29□□□□□ -1.88
SNU56YDR240C GAL4P04386 881 aa3.28□□□□□ -1.88
SNU56YDR240C MSS51P32335 436 aa3.28□□□□□ -1.88
SNU56YDR240C TPA1P40032 644 aaKnown RBP3.28□□□□□ -1.88
SNU56YDR240C THI3Q07471 609 aa3.28□□□□□ -1.88
SNU56YDR240C NEW1Q08972 1196 aaKnown RBP3.28□□□□□ -1.88
SNU56YDR240C PFA4Q12006 378 aa3.28□□□□□ -1.88
SNU56YDR240C RRI1Q12468 440 aa3.28□□□□□ -1.88
SNU56YDR240C SEC18P18759 758 aaKnown RBP3.28□□□□□ -1.88
SNU56YDR240C FRD1P32614 470 aaKnown RBP3.28□□□□□ -1.88
SNU56YDR240C SCO2P38072 301 aa3.28□□□□□ -1.88
SNU56YDR240C UBP7P40453 1071 aa3.28□□□□□ -1.88
SNU56YDR240C YIL152WP40455 235 aa3.28□□□□□ -1.88
SNU56YDR240C FOL1P53848 824 aa3.28□□□□□ -1.88
SNU56YDR240C YPL108WQ02872 168 aaPredicted RBP3.28□□□□□ -1.88
SNU56YDR240C DSE3Q08729 430 aa3.28□□□□□ -1.88
SNU56YDR240C LAC1P28496 418 aa3.27□□□□□ -1.89
SNU56YDR240C HES1P35843 434 aa3.27□□□□□ -1.89
SNU56YDR240C PHM8P40025 321 aa3.27□□□□□ -1.89
SNU56YDR240C GTB1Q04924 702 aa3.27□□□□□ -1.89
SNU56YDR240C SNA4Q07549 140 aa3.27□□□□□ -1.89
SNU56YDR240C OCT1P35999 772 aa3.26□□□□□ -1.89
SNU56YDR240C GND1P38720 489 aaKnown RBP3.26□□□□□ -1.89
SNU56YDR240C FUN12P39730 1002 aaKnown RBP3.26□□□□□ -1.89
SNU56YDR240C NPA3P47122 385 aa3.26□□□□□ -1.89
SNU56YDR240C YPT11P48559 417 aa3.26□□□□□ -1.89
SNU56YDR240C YNL144CP53907 740 aa3.26□□□□□ -1.89
SNU56YDR240C CEG1Q01159 459 aaPredicted RBP3.26□□□□□ -1.89
SNU56YDR240C MLH2Q07980 695 aa3.26□□□□□ -1.89
SNU56YDR240C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SNU56YDR240C SIR1P21691 654 aa3.25□□□□□ -1.89
SNU56YDR240C GCS1P35197 352 aa3.25□□□□□ -1.89
SNU56YDR240C STT3P39007 718 aaKnown RBP3.25□□□□□ -1.89
SNU56YDR240C YAT2P40017 923 aa3.25□□□□□ -1.89
SNU56YDR240C CDC1P40986 491 aa3.25□□□□□ -1.89
SNU56YDR240C YLR281CQ05863 155 aa3.25□□□□□ -1.89
SNU56YDR240C ECM22Q05958 814 aaPredicted RBP3.25□□□□□ -1.89
SNU56YDR240C YOR111WQ99210 232 aa3.25□□□□□ -1.89
SNU56YDR240C MCM3P24279 971 aaKnown RBP3.24□□□□□ -1.89
SNU56YDR240C NIC96P34077 839 aa3.24□□□□□ -1.89
SNU56YDR240C CAB2P40506 365 aa3.24□□□□□ -1.89
SNU56YDR240C UBX6P47049 396 aa3.24□□□□□ -1.89
SNU56YDR240C YGR079WP53249 370 aa3.24□□□□□ -1.89
SNU56YDR240C EIS1Q05050 843 aaKnown RBP3.24□□□□□ -1.89
SNU56YDR240C PDR8Q06149 701 aa3.24□□□□□ -1.89
SNU56YDR240C GRS2Q06817 618 aa3.24□□□□□ -1.89
SNU56YDR240C GSH2Q08220 491 aa3.24□□□□□ -1.89
SNU56YDR240C BIK1P11709 440 aa3.23□□□□□ -1.89
SNU56YDR240C ARC40P38328 384 aaKnown RBP3.23□□□□□ -1.89
SNU56YDR240C UBP8P50102 471 aa3.23□□□□□ -1.89
SNU56YDR240C EAF7P53911 425 aaKnown RBP3.23□□□□□ -1.89
SNU56YDR240C PIG1Q06216 648 aa3.23□□□□□ -1.89
SNU56YDR240C ATG23Q06671 453 aa3.23□□□□□ -1.89
SNU56YDR240C MCH4Q08268 501 aa3.23□□□□□ -1.89
SNU56YDR240C BAG7Q12128 409 aa3.23□□□□□ -1.89
SNU56YDR240C RVB2Q12464 471 aaKnown RBP3.23□□□□□ -1.89
SNU56YDR240C COX1P00401 534 aa3.22□□□□□ -1.89
SNU56YDR240C PCL6P40038 420 aa3.22□□□□□ -1.89
SNU56YDR240C MAD3P47074 515 aa3.22□□□□□ -1.89
SNU56YDR240C YPR003CP53394 754 aa3.22□□□□□ -1.89
SNU56YDR240C TGL2P54857 326 aa3.22□□□□□ -1.89
SNU56YDR240C ATG21Q02887 496 aa3.22□□□□□ -1.89
SNU56YDR240C SWF1Q04629 336 aa3.22□□□□□ -1.89
SNU56YDR240C SST2P11972 698 aaKnown RBP3.22□□□□□ -1.89
SNU56YDR240C YCR043CP25361 127 aa3.22□□□□□ -1.89
SNU56YDR240C URK1P27515 501 aa3.22□□□□□ -1.89
SNU56YDR240C VPS41P38959 992 aa3.22□□□□□ -1.89
SNU56YDR240C CCT4P39078 528 aaKnown RBP3.22□□□□□ -1.89
SNU56YDR240C DJP1P40564 432 aa3.22□□□□□ -1.89
SNU56YDR240C TES1P41903 349 aaKnown RBP3.22□□□□□ -1.89
SNU56YDR240C VPS25P47142 202 aa3.22□□□□□ -1.89
SNU56YDR240C IMA1P53051 589 aa3.22□□□□□ -1.89
SNU56YDR240C CAC2Q04199 468 aa3.22□□□□□ -1.89
SNU56YDR240C IWR1Q07532 353 aaPredicted RBP3.22□□□□□ -1.89
SNU56YDR240C ICL2Q12031 575 aa3.22□□□□□ -1.89
SNU56YDR240C YOL114CQ12322 202 aa3.22□□□□□ -1.89
SNU56YDR240C TMA7Q3E764 64 aaKnown RBP3.22□□□□□ -1.89
SNU56YDR240C YFL068WP0CX99 160 aa3.21□□□□□ -1.9
SNU56YDR240C YLL066W-AP0CY00 160 aa3.21□□□□□ -1.9
SNU56YDR240C YLL067W-AP0CY01 160 aa3.21□□□□□ -1.9
SNU56YDR240C RKM3P38222 552 aa3.21□□□□□ -1.9
SNU56YDR240C RTT107P38850 1070 aa3.21□□□□□ -1.9
SNU56YDR240C BUD16P39988 312 aa3.21□□□□□ -1.9
SNU56YDR240C MAF1P41910 395 aa3.21□□□□□ -1.9
SNU56YDR240C SKP2P42843 763 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms