RNA–Protein interactions for RNA: YDR224C

HTB1, Transcript of Histone H2B, yeast

Gene HTB1, Length 396 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTB1	YDR224C	SWI4	P25302	1093 aa	Known RBP	4.1	□□□□□ -1.75
HTB1	YDR224C	GCD7	P32502	381 aa	Predicted RBP	4.1	□□□□□ -1.75
HTB1	YDR224C	KES1	P35844	434 aa	Known RBP	4.1	□□□□□ -1.75
HTB1	YDR224C	VBA2	P38358	474 aa	Known RBP	4.1	□□□□□ -1.75
HTB1	YDR224C	SPC72	P39723	622 aa		4.1	□□□□□ -1.75
HTB1	YDR224C	SKP2	P42843	763 aa		4.1	□□□□□ -1.75
HTB1	YDR224C	YJR008W	P47085	338 aa		4.1	□□□□□ -1.75
HTB1	YDR224C	CPR6	P53691	371 aa	Known RBP	4.1	□□□□□ -1.75
HTB1	YDR224C	YPL191C	Q08930	360 aa		4.1	□□□□□ -1.75
HTB1	YDR224C	YLR111W	Q12528	110 aa		4.1	□□□□□ -1.75
HTB1	YDR224C	Q0010	Q9ZZX9	128 aa		4.1	□□□□□ -1.75
HTB1	YDR224C	ILV2	P07342	687 aa	Known RBP	4.09	□□□□□ -1.75
HTB1	YDR224C	FTH1	P38310	465 aa		4.09	□□□□□ -1.75
HTB1	YDR224C	IMD2	P38697	523 aa	Known RBP	4.09	□□□□□ -1.75
HTB1	YDR224C	IMD3	P50095	523 aa	Known RBP	4.09	□□□□□ -1.75
HTB1	YDR224C	IDP3	P53982	420 aa	Known RBP	4.09	□□□□□ -1.75
HTB1	YDR224C	RSC9	Q03124	581 aa		4.09	□□□□□ -1.75
HTB1	YDR224C	EIS1	Q05050	843 aa	Known RBP	4.09	□□□□□ -1.75
HTB1	YDR224C	RVB2	Q12464	471 aa	Known RBP	4.09	□□□□□ -1.75
HTB1	YDR224C	PET122	P10355	254 aa		4.08	□□□□□ -1.76
HTB1	YDR224C	ARP2	P32381	391 aa	Known RBP	4.08	□□□□□ -1.76
HTB1	YDR224C	ASK1	P35734	292 aa		4.08	□□□□□ -1.76
HTB1	YDR224C	PXL1	P36166	706 aa		4.08	□□□□□ -1.76
HTB1	YDR224C	FUN12	P39730	1002 aa	Known RBP	4.08	□□□□□ -1.76
HTB1	YDR224C	ACA1	P39970	489 aa		4.08	□□□□□ -1.76
HTB1	YDR224C	IRC7	P43623	340 aa		4.08	□□□□□ -1.76
HTB1	YDR224C	UBX6	P47049	396 aa		4.08	□□□□□ -1.76
HTB1	YDR224C	NPA3	P47122	385 aa		4.08	□□□□□ -1.76
HTB1	YDR224C	YAT1	P80235	687 aa		4.08	□□□□□ -1.76
HTB1	YDR224C	COX1	P00401	534 aa		4.07	□□□□□ -1.76
HTB1	YDR224C	SES1	P07284	462 aa	Known RBP	4.07	□□□□□ -1.76
HTB1	YDR224C	ILS1	P09436	1072 aa	Known RBP	4.07	□□□□□ -1.76
HTB1	YDR224C	MAK32	P23060	363 aa		4.07	□□□□□ -1.76
HTB1	YDR224C	CLB4	P24871	460 aa		4.07	□□□□□ -1.76
HTB1	YDR224C	LSC1	P53598	329 aa	Known RBP	4.07	□□□□□ -1.76
HTB1	YDR224C	UBX4	P54730	416 aa		4.07	□□□□□ -1.76
HTB1	YDR224C	MTG1	Q03151	367 aa	Predicted RBP	4.07	□□□□□ -1.76
HTB1	YDR224C	SNU56	Q03782	492 aa	Known RBP	4.07	□□□□□ -1.76
HTB1	YDR224C	IOC4	Q04213	475 aa		4.07	□□□□□ -1.76
HTB1	YDR224C	SUL2	Q12325	893 aa		4.07	□□□□□ -1.76
HTB1	YDR224C	CET1	O13297	549 aa	Predicted RBP	4.06	□□□□□ -1.76
HTB1	YDR224C	YMR085W	P0CF18	432 aa		4.06	□□□□□ -1.76
HTB1	YDR224C	BIK1	P11709	440 aa		4.06	□□□□□ -1.76
HTB1	YDR224C	PTC6	P25646	442 aa		4.06	□□□□□ -1.76
HTB1	YDR224C	URK1	P27515	501 aa		4.06	□□□□□ -1.76
HTB1	YDR224C	ERC1	P38767	581 aa		4.06	□□□□□ -1.76
HTB1	YDR224C	FSH1	P38777	243 aa	Known RBP	4.06	□□□□□ -1.76
HTB1	YDR224C	PUG1	P40100	303 aa		4.06	□□□□□ -1.76
HTB1	YDR224C	CIN1	P40987	1014 aa		4.06	□□□□□ -1.76
HTB1	YDR224C	IMA1	P53051	589 aa		4.06	□□□□□ -1.76
HTB1	YDR224C	YGR079W	P53249	370 aa		4.06	□□□□□ -1.76
HTB1	YDR224C	PGI1	P12709	554 aa	Known RBP	4.05	□□□□□ -1.76
HTB1	YDR224C	LAC1	P28496	418 aa		4.05	□□□□□ -1.76
HTB1	YDR224C	MRPL36	P36531	177 aa		4.05	□□□□□ -1.76
HTB1	YDR224C	TPM2	P40414	161 aa		4.05	□□□□□ -1.76
HTB1	YDR224C	TRS130	Q03660	1102 aa		4.05	□□□□□ -1.76
HTB1	YDR224C	YDR109C	Q04585	715 aa		4.05	□□□□□ -1.76
HTB1	YDR224C	RAD34	Q06665	692 aa		4.05	□□□□□ -1.76
HTB1	YDR224C	LEA1	Q08963	238 aa	Predicted RBP	4.05	□□□□□ -1.76
HTB1	YDR224C	LYS21	Q12122	440 aa	Known RBP	4.05	□□□□□ -1.76
HTB1	YDR224C	MSM1	P22438	575 aa		4.04	□□□□□ -1.76
HTB1	YDR224C	HES1	P35843	434 aa		4.04	□□□□□ -1.76
HTB1	YDR224C	YBR138C	P38277	524 aa		4.04	□□□□□ -1.76
HTB1	YDR224C	RPT2	P40327	437 aa	Known RBP	4.04	□□□□□ -1.76
HTB1	YDR224C	PSF2	P40359	213 aa		4.04	□□□□□ -1.76
HTB1	YDR224C	ZAP1	P47043	880 aa		4.04	□□□□□ -1.76
HTB1	YDR224C	TAM41	P53230	385 aa		4.04	□□□□□ -1.76
HTB1	YDR224C	GTB1	Q04924	702 aa		4.04	□□□□□ -1.76
HTB1	YDR224C	CRC1	Q12289	327 aa		4.04	□□□□□ -1.76
HTB1	YDR224C	NUC1	P08466	329 aa		4.03	□□□□□ -1.76
HTB1	YDR224C	APA1	P16550	321 aa	Known RBP	4.03	□□□□□ -1.76
HTB1	YDR224C	YAP1	P19880	650 aa	Known RBP	4.03	□□□□□ -1.76
HTB1	YDR224C	COQ3	P27680	312 aa		4.03	□□□□□ -1.76
HTB1	YDR224C	MSS51	P32335	436 aa		4.03	□□□□□ -1.76
HTB1	YDR224C	NUP120	P35729	1037 aa		4.03	□□□□□ -1.76
HTB1	YDR224C	NUP53	Q03790	475 aa		4.03	□□□□□ -1.76
HTB1	YDR224C	YPR089W	O13585	888 aa		4.02	□□□□□ -1.77
HTB1	YDR224C	DBF20	P32328	564 aa		4.02	□□□□□ -1.77
HTB1	YDR224C	GSH1	P32477	678 aa		4.02	□□□□□ -1.77
HTB1	YDR224C	PTH2	P34222	208 aa		4.02	□□□□□ -1.77
HTB1	YDR224C	GCS1	P35197	352 aa		4.02	□□□□□ -1.77
HTB1	YDR224C	CCT4	P39078	528 aa	Known RBP	4.02	□□□□□ -1.77
HTB1	YDR224C	BUD16	P39988	312 aa		4.02	□□□□□ -1.77
HTB1	YDR224C	ORC5	P50874	479 aa		4.02	□□□□□ -1.77
HTB1	YDR224C	BLS1	Q06071	122 aa		4.02	□□□□□ -1.77
HTB1	YDR224C	ATG23	Q06671	453 aa		4.02	□□□□□ -1.77
HTB1	YDR224C	THI3	Q07471	609 aa		4.02	□□□□□ -1.77
HTB1	YDR224C	NCP1	P16603	691 aa	Known RBP	4.01	□□□□□ -1.77
HTB1	YDR224C	NPR3	P38742	1146 aa		4.01	□□□□□ -1.77
HTB1	YDR224C	ERV46	P39727	415 aa		4.01	□□□□□ -1.77
HTB1	YDR224C	YIL024C	P40543	189 aa		4.01	□□□□□ -1.77
HTB1	YDR224C	CFD1	P40558	293 aa		4.01	□□□□□ -1.77
HTB1	YDR224C	DJP1	P40564	432 aa		4.01	□□□□□ -1.77
HTB1	YDR224C	YRB30	P53107	440 aa	Predicted RBP	4.01	□□□□□ -1.77
HTB1	YDR224C	COP1	P53622	1201 aa	Known RBP	4.01	□□□□□ -1.77
HTB1	YDR224C	MRPL13	Q02204	264 aa		4.01	□□□□□ -1.77
HTB1	YDR224C	MRPL1	Q04599	285 aa		4.01	□□□□□ -1.77
HTB1	YDR224C	STP3	Q05937	343 aa		4.01	□□□□□ -1.77
HTB1	YDR224C	BAG7	Q12128	409 aa		4.01	□□□□□ -1.77
HTB1	YDR224C	ATP2	P00830	511 aa	Known RBP	4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms