RNA–Protein interactions for RNA: YDR211W

GCD6, Transcript of Catalytic epsilon subunit of the translation initiation factor eIF2B, yeast

Gene GCD6, Length 2,139 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD6	YDR211W	SSC1	P0CS90	654 aa	Known RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	SAM1	P10659	382 aa	Known RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	YAK1	P14680	807 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	RNR1	P21524	888 aa	Known RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	VPS34	P22543	875 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	SNT1	P25357	1226 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	ADY2	P25613	283 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	CDC48	P25694	835 aa	Known RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	SHP1	P34223	423 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	DEF1	P35732	738 aa	Known RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	YKL151C	P36059	337 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	PFF1	P38244	976 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	POP4	P38336	279 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	SPC97	P38863	823 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	SPC72	P39723	622 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	SIT1	P39980	628 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	ALG5	P40350	334 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	CPR7	P47103	393 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	YML6	P51998	286 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	TAF6	P53040	516 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	TAN1	P53072	289 aa	Predicted RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	VID30	P53076	958 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	YGR016W	P53209	190 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	COS6	P53344	381 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	IST1	P53843	298 aa	Predicted RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	RPM2	Q02773	1202 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	ERO1	Q03103	563 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	ATG16	Q03818	150 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	YET2	Q04210	160 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	HFD1	Q04458	532 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	GTB1	Q04924	702 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
GCD6	YDR211W	GPN2	Q08726	347 aa	Predicted RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	SVS1	Q12254	260 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	DBP10	Q12389	995 aa	Known RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	BI3	Q9ZZW7	517 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	PMA1	P05030	918 aa	Known RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
GCD6	YDR211W	CDC20	P26309	610 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	DGR2	P32330	852 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	TOA1	P32773	286 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	YSC83	P32792	385 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	TFC3	P34111	1160 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	AST1	P35183	429 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	CSG2	P35206	410 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	PDX3	P38075	228 aa	Known RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	KEL1	P38853	1164 aa	Known RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	TMN3	P40071	706 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	MGS1	P40151	587 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	KHA1	P40309	873 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	HOS4	P40480	1083 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	DPH1	P40487	425 aa	Known RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	AIM21	P40563	679 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	YFL040W	P43562	540 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	ZAP1	P47043	880 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	COS5	P47187	383 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	HSH155	P49955	971 aa	Known RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	FOL2	P51601	243 aa	Known RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	SFB2	P53953	876 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	YDR476C	Q03362	224 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	YET3	Q07451	203 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	CRD1	Q07560	283 aa		3.1	□□□□□ -1.91
GCD6	YDR211W	FAP7	Q12055	197 aa	Predicted RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	RRG1	Q12167	365 aa	Predicted RBP	3.1	□□□□□ -1.91
GCD6	YDR211W	SFL1	P20134	766 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	MRPL25	P23369	157 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	RAD14	P28519	371 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	SEC21	P32074	935 aa	Known RBP	3.09	□□□□□ -1.91
GCD6	YDR211W	MRE11	P32829	692 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	MRP8	P35719	219 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	HES1	P35843	434 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	KDX1	P36005	433 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	ETR1	P38071	380 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	SAW1	P39735	261 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	FIS1	P40515	155 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	IRR1	P40541	1150 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	ASG7	P46993	209 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	TPO2	P53283	614 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	PXR1	P53335	271 aa	Predicted RBP	3.09	□□□□□ -1.91
GCD6	YDR211W	ELP3	Q02908	557 aa	Known RBP	3.09	□□□□□ -1.91
GCD6	YDR211W	ADE13	Q05911	482 aa	Known RBP	3.09	□□□□□ -1.91
GCD6	YDR211W	ACK1	Q07622	623 aa	Predicted RBP	3.09	□□□□□ -1.91
GCD6	YDR211W	RLP24	Q07915	199 aa	Known RBP	3.09	□□□□□ -1.91
GCD6	YDR211W	ABP140	Q08641	628 aa	Known RBP	3.09	□□□□□ -1.91
GCD6	YDR211W	YPR202W	Q08993	238 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	YDR018C	Q12185	396 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	RUP1	Q12242	671 aa		3.09	□□□□□ -1.91
GCD6	YDR211W	SEM1	O94742	89 aa		3.08	□□□□□ -1.92
GCD6	YDR211W	HSF1	P10961	833 aa		3.08	□□□□□ -1.92
GCD6	YDR211W	SNA3	P14359	133 aa		3.08	□□□□□ -1.92
GCD6	YDR211W	CDC42	P19073	191 aa		3.08	□□□□□ -1.92
GCD6	YDR211W	URE2	P23202	354 aa	Known RBP	3.08	□□□□□ -1.92
GCD6	YDR211W	KAR4	P25583	335 aa		3.08	□□□□□ -1.92
GCD6	YDR211W	HXT3	P32466	567 aa	Known RBP	3.08	□□□□□ -1.92
GCD6	YDR211W	TMT1	P32643	299 aa		3.08	□□□□□ -1.92
GCD6	YDR211W	SIP2	P34164	415 aa	Known RBP	3.08	□□□□□ -1.92
GCD6	YDR211W	COY1	P34237	679 aa		3.08	□□□□□ -1.92
GCD6	YDR211W	NUP120	P35729	1037 aa		3.08	□□□□□ -1.92
GCD6	YDR211W	YKR078W	P36158	585 aa	Known RBP	3.08	□□□□□ -1.92
GCD6	YDR211W	PHO88	P38264	188 aa	Predicted RBP	3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms