RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCC2	YDR180W	STB2	P46679	850 aa		1.09	□□□□□ -2.24
SCC2	YDR180W	NMD5	P46970	1048 aa		1.09	□□□□□ -2.24
SCC2	YDR180W	TAF6	P53040	516 aa		1.09	□□□□□ -2.24
SCC2	YDR180W	ZIP2	P53061	704 aa		1.09	□□□□□ -2.24
SCC2	YDR180W	YGR045C	P53229	120 aa		1.09	□□□□□ -2.24
SCC2	YDR180W	BIO5	P53744	561 aa	Known RBP	1.09	□□□□□ -2.24
SCC2	YDR180W	PGA2	P53903	129 aa		1.09	□□□□□ -2.24
SCC2	YDR180W	ERG5	P54781	538 aa		1.09	□□□□□ -2.24
SCC2	YDR180W	MFM1	Q02783	413 aa		1.09	□□□□□ -2.24
SCC2	YDR180W	SRP1	Q02821	542 aa	Known RBP	1.09	□□□□□ -2.24
SCC2	YDR180W	ARX1	Q03862	593 aa	Known RBP	1.09	□□□□□ -2.24
SCC2	YDR180W	NHX1	Q04121	633 aa		1.09	□□□□□ -2.24
SCC2	YDR180W	YKU80	Q04437	629 aa		1.09	□□□□□ -2.24
SCC2	YDR180W	EIS1	Q05050	843 aa	Known RBP	1.09	□□□□□ -2.24
SCC2	YDR180W	BLS1	Q06071	122 aa		1.09	□□□□□ -2.24
SCC2	YDR180W	YCG1	Q06680	1035 aa		1.09	□□□□□ -2.24
SCC2	YDR180W	BRE4	Q07660	1125 aa		1.09	□□□□□ -2.24
SCC2	YDR180W	AKR2	Q12013	749 aa		1.09	□□□□□ -2.24
SCC2	YDR180W	CWC2	Q12046	339 aa	Predicted RBP	1.09	□□□□□ -2.24
SCC2	YDR180W	BUG1	Q12191	341 aa		1.09	□□□□□ -2.24
SCC2	YDR180W	HSH49	Q99181	213 aa	Predicted RBP	1.09	□□□□□ -2.24
SCC2	YDR180W	PPR1	P07272	904 aa	Predicted RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	ILV2	P07342	687 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	VAS1	P07806	1104 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	GUK1	P15454	187 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	THR4	P16120	514 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	ERS1	P17261	260 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	CKA2	P19454	339 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	RFA1	P22336	621 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	MIH1	P23748	554 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	MCM3	P24279	971 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	FUN30	P31380	1131 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	SLC1	P33333	303 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	COY1	P34237	679 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	MNN4	P36044	1178 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	CHK1	P38147	527 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	ERG7	P38604	731 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	LAM1	P38851	1228 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	CCT4	P39078	528 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	CAJ1	P39101	391 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	ACA1	P39970	489 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	PRK1	P40494	810 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	BRE2	P43132	505 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	MAD3	P47074	515 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	SSN8	P47821	323 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	ASK10	P48361	1146 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	NAS6	P50086	228 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	IMD3	P50095	523 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	YPT32	P51996	222 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	CUE3	P53137	624 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	TOF1	P53840	1238 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	TIM10	P87108	93 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	PFA5	Q03289	374 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	YML108W	Q03759	105 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	PLP1	Q04004	230 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	RAD30	Q04049	632 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	TSR2	Q06672	205 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	YDL114W	Q07530	308 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	YOR059C	Q08448	450 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	HSP42	Q12329	375 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	DPH6	Q12429	685 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	RPS9A	O13516	197 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	PRC1	P00729	532 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	NFT1	P0CE68	1218 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	BAR1	P12630	587 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	GAL3	P13045	520 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	RNR3	P21672	869 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	CNB1	P25296	175 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	RAD14	P28519	371 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	HXT3	P32466	567 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	MAC1	P35192	417 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	EMC3	P36039	253 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	SCO2	P38072	301 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	TAF5	P38129	798 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	NPT1	P39683	429 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	ICP55	P40051	511 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	RIC1	P40395	1056 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	MAD2	P40958	196 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	LAM5	P43560	674 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	DUG1	P43616	481 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	YJL045W	P47052	634 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	MDE1	P47095	244 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	NIT3	P49954	291 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	SHE4	P51534	789 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	PUS2	P53167	370 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	LSC2	P53312	427 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	YTP1	P53584	459 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	CPR6	P53691	371 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	PTA1	Q01329	785 aa	Predicted RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	SED5	Q01590	340 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	RPM2	Q02773	1202 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	LGE1	Q02796	332 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	YMR099C	Q03161	297 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	YMR265C	Q03508	461 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	SKY1	Q03656	742 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	TRS130	Q03660	1102 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	CLU1	Q03690	1277 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	YDR109C	Q04585	715 aa		1.08	□□□□□ -2.24
SCC2	YDR180W	RGC1	Q06108	1083 aa	Known RBP	1.08	□□□□□ -2.24
SCC2	YDR180W	SMD2	Q06217	110 aa	Known RBP	1.08	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms