RNA–Protein interactions for RNA: YDL194W

SNF3, Transcript of Plasma membrane low glucose sensor, regulates glucose transport, yeast

Gene SNF3, Length 2,655 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF3	YDL194W	ECM5	Q03214	1411 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	NOT3	P06102	836 aa	Known RBP	5.08	□□□□□ -1.6
SNF3	YDL194W	YER152C	P10356	443 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	ARO3	P14843	370 aa	Known RBP	5.08	□□□□□ -1.6
SNF3	YDL194W	GEX1	P25596	615 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	MCM5	P29496	775 aa	Known RBP	5.08	□□□□□ -1.6
SNF3	YDL194W	SIN4	P32259	974 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	SAC6	P32599	642 aa	Known RBP	5.08	□□□□□ -1.6
SNF3	YDL194W	ABD1	P32783	436 aa	Predicted RBP	5.08	□□□□□ -1.6
SNF3	YDL194W	RPT3	P33298	428 aa	Known RBP	5.08	□□□□□ -1.6
SNF3	YDL194W	PMT1	P33775	817 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	MRPL10	P36520	322 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	LRO1	P40345	661 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	STB2	P46679	850 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	RRT6	P53117	311 aa	Predicted RBP	5.08	□□□□□ -1.6
SNF3	YDL194W	VPS75	P53853	264 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	RMI1	Q02685	241 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	WAR1	Q03631	944 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	YML108W	Q03759	105 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	ATC1	Q04005	294 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	LUC7	Q07508	261 aa	Predicted RBP	5.08	□□□□□ -1.6
SNF3	YDL194W	PUS9	Q12069	462 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	KCS1	Q12494	1050 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	HAA1	Q12753	694 aa	Known RBP	5.08	□□□□□ -1.6
SNF3	YDL194W	HIS3	P06633	220 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	SSA3	P09435	649 aa	Known RBP	5.07	□□□□□ -1.6
SNF3	YDL194W	RAD18	P10862	487 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	KIN2	P13186	1147 aa	Known RBP	5.07	□□□□□ -1.6
SNF3	YDL194W	YBR197C	P38306	217 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	STS1	P38637	319 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	WSS1	P38838	269 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	LYS14	P40971	790 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	FET4	P40988	552 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	NIT3	P49954	291 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	MRK1	P50873	501 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	CPR6	P53691	371 aa	Known RBP	5.07	□□□□□ -1.6
SNF3	YDL194W	PRM1	P53835	661 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	YMR102C	Q03177	834 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	SKY1	Q03656	742 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	RVB1	Q03940	463 aa	Known RBP	5.07	□□□□□ -1.6
SNF3	YDL194W	RPN5	Q12250	445 aa	Known RBP	5.07	□□□□□ -1.6
SNF3	YDL194W	HBN1	Q96VH4	193 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	WHI2	P12611	486 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	UBC1	P21734	215 aa	Known RBP	5.07	□□□□□ -1.6
SNF3	YDL194W	IMG2	P25642	146 aa	Predicted RBP	5.07	□□□□□ -1.6
SNF3	YDL194W	KAP122	P32767	1081 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	BCH2	P36122	765 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	MRPL37	P36532	105 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	GNP1	P48813	663 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	ALT2	P52892	507 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	YGR127W	P53275	312 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	BSC5	P53755	489 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	GPN2	Q08726	347 aa	Predicted RBP	5.07	□□□□□ -1.6
SNF3	YDL194W	AEP3	Q12089	606 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	GET4	Q12125	312 aa		5.07	□□□□□ -1.6
SNF3	YDL194W	MRPL23	Q12487	163 aa	Predicted RBP	5.07	□□□□□ -1.6
SNF3	YDL194W	DCD1	P06773	312 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	RAD7	P06779	565 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	SAM1	P10659	382 aa	Known RBP	5.06	□□□□□ -1.6
SNF3	YDL194W	TOP3	P13099	656 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	ALG1	P16661	449 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	KGD1	P20967	1014 aa	Known RBP	5.06	□□□□□ -1.6
SNF3	YDL194W	VPS1	P21576	704 aa	Known RBP	5.06	□□□□□ -1.6
SNF3	YDL194W	BUD5	P25300	642 aa	Predicted RBP	5.06	□□□□□ -1.6
SNF3	YDL194W	ZIP1	P31111	875 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	HXT4	P32467	576 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	PGM1	P33401	570 aa	Known RBP	5.06	□□□□□ -1.6
SNF3	YDL194W	SAK1	P38990	1142 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	PIG2	P40187	538 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	JJJ2	P46997	583 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	COP1	P53622	1201 aa	Known RBP	5.06	□□□□□ -1.6
SNF3	YDL194W	MRS2	Q01926	470 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	KRE28	Q04431	385 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	MRPL1	Q04599	285 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	DYN3	Q04949	312 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	VPS74	Q06385	345 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	NTO1	Q12311	748 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	NCB2	Q92317	146 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	MTR10	Q99189	972 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	GAP1	P19145	602 aa	Predicted RBP	5.06	□□□□□ -1.6
SNF3	YDL194W	GIT1	P25346	518 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	KRE2	P27809	442 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	SWC5	P38326	303 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	TAE1	P38340	232 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	ICE2	P40499	491 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	CHS6	P40955	746 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	LSM1	P47017	172 aa	Known RBP	5.06	□□□□□ -1.6
SNF3	YDL194W	PRP31	P49704	494 aa	Predicted RBP	5.06	□□□□□ -1.6
SNF3	YDL194W	BUD22	Q04347	519 aa	Known RBP	5.06	□□□□□ -1.6
SNF3	YDL194W	YLR297W	Q05899	129 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	SWT1	Q12104	458 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	LDB19	Q12502	818 aa		5.06	□□□□□ -1.6
SNF3	YDL194W	HIS4	P00815	799 aa	Known RBP	5.05	□□□□□ -1.6
SNF3	YDL194W	RPL35A	P0CX84	120 aa	Known RBP	5.05	□□□□□ -1.6
SNF3	YDL194W	RPL35B	P0CX85	120 aa	Known RBP	5.05	□□□□□ -1.6
SNF3	YDL194W	CRM1	P30822	1084 aa	Known RBP	5.05	□□□□□ -1.6
SNF3	YDL194W	PCM1	P38628	557 aa	Known RBP	5.05	□□□□□ -1.6
SNF3	YDL194W	OSH7	P38755	437 aa		5.05	□□□□□ -1.6
SNF3	YDL194W	LYS9	P38999	446 aa		5.05	□□□□□ -1.6
SNF3	YDL194W	YEL025C	P39991	1188 aa		5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms