RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	PSY3	Q12318	242 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	LDB17	Q12342	491 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	FMP16	Q12497	93 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	FLO1	P32768	1537 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	TEF1	P02994	458 aa	Known RBP	4.07	□□□□□ -1.76
VMA1	YDL185W	TPK2	P06245	380 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	CDC24	P11433	854 aa	Predicted RBP	4.07	□□□□□ -1.76
VMA1	YDL185W	PFK1	P16861	987 aa	Known RBP	4.07	□□□□□ -1.76
VMA1	YDL185W	VMA1	P17255	1071 aa	Known RBP	4.07	□□□□□ -1.76
VMA1	YDL185W	DAL1	P32375	460 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	VMA8	P32610	256 aa	Known RBP	4.07	□□□□□ -1.76
VMA1	YDL185W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
VMA1	YDL185W	DYS1	P38791	387 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	VMA7	P39111	118 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	CEM1	P39525	442 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	YER156C	P40093	338 aa	Known RBP	4.07	□□□□□ -1.76
VMA1	YDL185W	PEP8	P40335	379 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	LCB2	P40970	561 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	FAR3	P46671	204 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	ALY2	P47029	1046 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	PGA2	P53903	129 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	VPS36	Q06696	566 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	CDC73	Q06697	393 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	FIG2	P25653	1609 aa		4.07	□□□□□ -1.76
VMA1	YDL185W	CCP1	P00431	361 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	KSS1	P14681	368 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	CLB3	P24870	427 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	SPB1	P25582	841 aa	Predicted RBP	4.06	□□□□□ -1.76
VMA1	YDL185W	GUT1	P32190	709 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	SAS3	P34218	831 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	YHR219W	P38900	624 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	RTT101	P47050	842 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	BNI5	P53890	448 aa	Known RBP	4.06	□□□□□ -1.76
VMA1	YDL185W	RSC9	Q03124	581 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	AIM33	Q04516	312 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	GAL83	Q04739	417 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	DXO1	Q06349	442 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	NGL1	Q08213	363 aa	Known RBP	4.06	□□□□□ -1.76
VMA1	YDL185W	RAX1	Q08760	435 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	VPS54	Q12071	889 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	RAD59	Q12223	238 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	MMP1	Q12372	583 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	CDC33	P07260	213 aa	Known RBP	4.06	□□□□□ -1.76
VMA1	YDL185W	PMS1	P14242	873 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	RPL8B	P29453	256 aa	Known RBP	4.06	□□□□□ -1.76
VMA1	YDL185W	GDH2	P33327	1092 aa	Known RBP	4.06	□□□□□ -1.76
VMA1	YDL185W	GLG1	P36143	616 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
VMA1	YDL185W	GAA1	P39012	614 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	PSF2	P40359	213 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	ROG3	P43602	733 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	CWC23	P52868	283 aa	Predicted RBP	4.06	□□□□□ -1.76
VMA1	YDL185W	TWF1	P53250	332 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	MUK1	Q02866	612 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	NOG1	Q02892	647 aa	Known RBP	4.06	□□□□□ -1.76
VMA1	YDL185W	GCN5	Q03330	439 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	RSN1	Q03516	953 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	ARX1	Q03862	593 aa	Known RBP	4.06	□□□□□ -1.76
VMA1	YDL185W	CSM3	Q04659	317 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	AAD15	Q08361	143 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	ACF2	Q12168	779 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	YDR018C	Q12185	396 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	YDL206W	Q12424	762 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	CDC19	P00549	500 aa	Known RBP	4.06	□□□□□ -1.76
VMA1	YDL185W	TUB3	P09734	445 aa	Known RBP	4.06	□□□□□ -1.76
VMA1	YDL185W	GLN4	P13188	809 aa	Known RBP	4.06	□□□□□ -1.76
VMA1	YDL185W	RED1	P14291	827 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	PMA2	P19657	947 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	YAP1	P19880	650 aa	Known RBP	4.06	□□□□□ -1.76
VMA1	YDL185W	ECM31	P38122	312 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	FAA2	P39518	744 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	ELP2	P42935	788 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	YML6	P51998	286 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	MET13	P53128	600 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	YGR273C	P53329	174 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	VAC7	P53950	1165 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	SLT2	Q00772	484 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	MRPL13	Q02204	264 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	HER2	Q03557	464 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	DYN3	Q04949	312 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	SVF1	Q05515	481 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	YPL277C	Q08989	487 aa		4.06	□□□□□ -1.76
VMA1	YDL185W	GRX2	P17695	143 aa	Known RBP	4.05	□□□□□ -1.76
VMA1	YDL185W	YSP3	P25036	478 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	URA7	P28274	579 aa	Known RBP	4.05	□□□□□ -1.76
VMA1	YDL185W	YJU3	P28321	313 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	SMI1	P32566	505 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	STE5	P32917	917 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	SER1	P33330	395 aa	Known RBP	4.05	□□□□□ -1.76
VMA1	YDL185W	PTK1	P36002	662 aa	Predicted RBP	4.05	□□□□□ -1.76
VMA1	YDL185W	ARO8	P53090	500 aa	Known RBP	4.05	□□□□□ -1.76
VMA1	YDL185W	GET1	P53192	235 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	DIP5	P53388	608 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	ARE2	P53629	642 aa	Known RBP	4.05	□□□□□ -1.76
VMA1	YDL185W	DBP6	P53734	629 aa	Known RBP	4.05	□□□□□ -1.76
VMA1	YDL185W	COG5	P53951	403 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	REX2	P54964	269 aa	Known RBP	4.05	□□□□□ -1.76
VMA1	YDL185W	ENT4	Q07872	247 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	TPK3	P05986	398 aa		4.05	□□□□□ -1.76
VMA1	YDL185W	ACE2	P21192	770 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms