RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W NSI1Q12457 570 aa5.83□□□□□ -1.48
SHM1YBR263W STE11P23561 717 aa5.83□□□□□ -1.48
SHM1YBR263W PPZ1P26570 692 aa5.83□□□□□ -1.48
SHM1YBR263W MEI4P29467 408 aa5.83□□□□□ -1.48
SHM1YBR263W YKL097CP34245 136 aa5.83□□□□□ -1.48
SHM1YBR263W YIL161WP40449 235 aaKnown RBP5.83□□□□□ -1.48
SHM1YBR263W NDC80P40460 691 aa5.83□□□□□ -1.48
SHM1YBR263W QDR1P40475 563 aa5.83□□□□□ -1.48
SHM1YBR263W TCB2P48231 1178 aa5.83□□□□□ -1.48
SHM1YBR263W PEX31P53203 462 aa5.83□□□□□ -1.48
SHM1YBR263W BET4Q00618 327 aa5.83□□□□□ -1.48
SHM1YBR263W INA17Q02888 182 aa5.83□□□□□ -1.48
SHM1YBR263W NSE5Q03718 556 aa5.83□□□□□ -1.48
SHM1YBR263W RKM2Q03942 479 aa5.83□□□□□ -1.48
SHM1YBR263W ARA2Q04212 335 aa5.83□□□□□ -1.48
SHM1YBR263W ESC2Q06340 456 aa5.83□□□□□ -1.48
SHM1YBR263W YOR387CQ08910 206 aa5.83□□□□□ -1.48
SHM1YBR263W TUB3P09734 445 aaKnown RBP5.82□□□□□ -1.48
SHM1YBR263W PMS1P14242 873 aa5.82□□□□□ -1.48
SHM1YBR263W YCR015CP25616 317 aa5.82□□□□□ -1.48
SHM1YBR263W HXT3P32466 567 aaKnown RBP5.82□□□□□ -1.48
SHM1YBR263W PCA1P38360 1216 aa5.82□□□□□ -1.48
SHM1YBR263W YHL008CP38750 627 aa5.82□□□□□ -1.48
SHM1YBR263W END3P39013 349 aa5.82□□□□□ -1.48
SHM1YBR263W RIM8P53179 542 aa5.82□□□□□ -1.48
SHM1YBR263W YNL247WP53852 767 aaKnown RBP5.82□□□□□ -1.48
SHM1YBR263W SND1Q04007 877 aa5.82□□□□□ -1.48
SHM1YBR263W ECM38Q05902 660 aaPredicted RBP5.82□□□□□ -1.48
SHM1YBR263W THI7Q05998 598 aa5.82□□□□□ -1.48
SHM1YBR263W AAD4Q07747 329 aa5.82□□□□□ -1.48
SHM1YBR263W SVS1Q12254 260 aa5.82□□□□□ -1.48
SHM1YBR263W IZH4Q99393 312 aa5.82□□□□□ -1.48
SHM1YBR263W BET2P20133 325 aa5.81□□□□□ -1.48
SHM1YBR263W SIR1P21691 654 aa5.81□□□□□ -1.48
SHM1YBR263W COY1P34237 679 aa5.81□□□□□ -1.48
SHM1YBR263W ECM2P38241 364 aaKnown RBP5.81□□□□□ -1.48
SHM1YBR263W ATG12P38316 186 aa5.81□□□□□ -1.48
SHM1YBR263W REI1P38344 393 aaPredicted RBP5.81□□□□□ -1.48
SHM1YBR263W FSH1P38777 243 aaKnown RBP5.81□□□□□ -1.48
SHM1YBR263W LAM1P38851 1228 aa5.81□□□□□ -1.48
SHM1YBR263W PRM9P39551 298 aa5.81□□□□□ -1.48
SHM1YBR263W FLC2P39719 783 aa5.81□□□□□ -1.48
SHM1YBR263W ARG2P40360 574 aa5.81□□□□□ -1.48
SHM1YBR263W UFE1P41834 346 aa5.81□□□□□ -1.48
SHM1YBR263W RRT5P43607 289 aa5.81□□□□□ -1.48
SHM1YBR263W ALY2P47029 1046 aa5.81□□□□□ -1.48
SHM1YBR263W RTT101P47050 842 aa5.81□□□□□ -1.48
SHM1YBR263W COQ6P53318 479 aa5.81□□□□□ -1.48
SHM1YBR263W MTG1Q03151 367 aaPredicted RBP5.81□□□□□ -1.48
SHM1YBR263W URH1Q04179 340 aa5.81□□□□□ -1.48
SHM1YBR263W TDA9Q04545 1251 aa5.81□□□□□ -1.48
SHM1YBR263W ECI1Q05871 280 aa5.81□□□□□ -1.48
SHM1YBR263W AIM41Q12032 185 aa5.81□□□□□ -1.48
SHM1YBR263W YDR018CQ12185 396 aa5.81□□□□□ -1.48
SHM1YBR263W ZRT2Q12436 422 aa5.81□□□□□ -1.48
SHM1YBR263W RPS4AP0CX35 261 aaKnown RBP5.8□□□□□ -1.48
SHM1YBR263W RPS4BP0CX36 261 aaKnown RBP5.8□□□□□ -1.48
SHM1YBR263W MET16P18408 261 aaPredicted RBP5.8□□□□□ -1.48
SHM1YBR263W SLY1P22213 666 aa5.8□□□□□ -1.48
SHM1YBR263W IMG2P25642 146 aaPredicted RBP5.8□□□□□ -1.48
SHM1YBR263W DPB3P27344 201 aa5.8□□□□□ -1.48
SHM1YBR263W MMS21P38632 267 aa5.8□□□□□ -1.48
SHM1YBR263W EDC3P39998 551 aaKnown RBP5.8□□□□□ -1.48
SHM1YBR263W MKT1P40850 830 aaKnown RBP5.8□□□□□ -1.48
SHM1YBR263W SNG1P46950 547 aa5.8□□□□□ -1.48
SHM1YBR263W RPC17P47076 161 aa5.8□□□□□ -1.48
SHM1YBR263W MRX6P48564 524 aa5.8□□□□□ -1.48
SHM1YBR263W YML6P51998 286 aa5.8□□□□□ -1.48
SHM1YBR263W TRM112P53738 135 aaPredicted RBP5.8□□□□□ -1.48
SHM1YBR263W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48 RIP-Chip
SHM1YBR263W MSH6Q03834 1242 aa5.8□□□□□ -1.48
SHM1YBR263W TMN2Q04562 672 aa5.8□□□□□ -1.48
SHM1YBR263W PET111P08468 800 aa5.79□□□□□ -1.48
SHM1YBR263W PUF4P25339 888 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
SHM1YBR263W GCD6P32501 712 aaKnown RBP5.79□□□□□ -1.48
SHM1YBR263W GCG1P32656 232 aaKnown RBP5.79□□□□□ -1.48
SHM1YBR263W AIM26P32858 118 aa5.79□□□□□ -1.48
SHM1YBR263W URA8P38627 578 aaPredicted RBP5.79□□□□□ -1.48
SHM1YBR263W AIM18P38884 321 aa5.79□□□□□ -1.48
SHM1YBR263W SAW1P39735 261 aa5.79□□□□□ -1.48
SHM1YBR263W MAD1P40957 749 aa5.79□□□□□ -1.48
SHM1YBR263W CNN1P43618 361 aa5.79□□□□□ -1.48
SHM1YBR263W RFX1P48743 811 aa5.79□□□□□ -1.48
SHM1YBR263W COP1P53622 1201 aaKnown RBP5.79□□□□□ -1.48
SHM1YBR263W RPN4Q03465 531 aa5.79□□□□□ -1.48
SHM1YBR263W VTI1Q04338 217 aa5.79□□□□□ -1.48
SHM1YBR263W YDL073WQ07454 984 aa5.79□□□□□ -1.48
SHM1YBR263W TPO1Q07824 586 aa5.79□□□□□ -1.48
SHM1YBR263W ALG6Q12001 544 aaKnown RBP5.79□□□□□ -1.48
SHM1YBR263W GPM3Q12326 303 aa5.79□□□□□ -1.48
SHM1YBR263W PDH1Q12428 516 aaKnown RBP5.79□□□□□ -1.48
SHM1YBR263W HIS1P00498 297 aaKnown RBP5.78□□□□□ -1.48
SHM1YBR263W GAS1P22146 559 aaKnown RBP5.78□□□□□ -1.48
SHM1YBR263W ADY2P25613 283 aa5.78□□□□□ -1.48
SHM1YBR263W YEL043WP32618 956 aa5.78□□□□□ -1.48
SHM1YBR263W SEC6P32844 805 aa5.78□□□□□ -1.48
SHM1YBR263W BIT2P38346 545 aa5.78□□□□□ -1.48
SHM1YBR263W MSG5P38590 489 aa5.78□□□□□ -1.48
SHM1YBR263W SAK1P38990 1142 aa5.78□□□□□ -1.48
SHM1YBR263W STL1P39932 569 aa5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms