RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	AIM32	Q04689	311 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	YLR345W	Q06137	509 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	TFC6	Q06339	672 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	PEX19	Q07418	342 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	MLH2	Q07980	695 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	HUA2	Q12134	243 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	FRE6	Q12473	712 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	RPL11B	Q3E757	174 aa	Predicted RBP	3.85	□□□□□ -1.79
YAL004W	YAL004W	DDP1	Q99321	188 aa	Known RBP	3.85	□□□□□ -1.79
YAL004W	YAL004W	LAM4	P38800	1345 aa		3.85	□□□□□ -1.79
YAL004W	YAL004W	DIF1	O13577	133 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	RPL22A	P05749	121 aa	Known RBP	3.84	□□□□□ -1.79
YAL004W	YAL004W	SEC53	P07283	254 aa	Known RBP	3.84	□□□□□ -1.79
YAL004W	YAL004W	POL3	P15436	1097 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	THR1	P17423	357 aa	Known RBP	3.84	□□□□□ -1.79
YAL004W	YAL004W	MBR1	P23493	339 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	PRP22	P24384	1145 aa	Known RBP	3.84	□□□□□ -1.79
YAL004W	YAL004W	DBP2	P24783	546 aa	Known RBP	3.84	□□□□□ -1.79
YAL004W	YAL004W	POL4	P25615	582 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	DAL80	P26343	269 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	PEP3	P27801	918 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	SSE1	P32589	693 aa	Known RBP	3.84	□□□□□ -1.79
YAL004W	YAL004W	NIP100	P33420	868 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	STE13	P33894	931 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	PRX1	P34227	261 aa	Known RBP	3.84	□□□□□ -1.79
YAL004W	YAL004W	CAB3	P36076	571 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	UIP5	P36137	443 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	YKR051W	P36142	418 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	APE3	P37302	537 aa	Known RBP	3.84	□□□□□ -1.79
YAL004W	YAL004W	RFT1	P38206	574 aa	Predicted RBP	3.84	□□□□□ -1.79
YAL004W	YAL004W	TIF5	P38431	405 aa	Known RBP	3.84	□□□□□ -1.79
YAL004W	YAL004W	YHR131C	P38835	850 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	RLP7	P40693	322 aa	Known RBP	3.84	□□□□□ -1.79
YAL004W	YAL004W	SHR5	P41912	237 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	SKP2	P42843	763 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	YFL052W	P43551	465 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	HXT16	P47185	567 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	KEL2	P50090	882 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	FOL2	P51601	243 aa	Known RBP	3.84	□□□□□ -1.79
YAL004W	YAL004W	MNP1	P53163	194 aa	Predicted RBP	3.84	□□□□□ -1.79
YAL004W	YAL004W	SGF73	P53165	657 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	JJJ1	P53863	590 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	ALF1	P53904	254 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	EOS1	P53938	366 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	MTD1	Q02046	320 aa	Known RBP	3.84	□□□□□ -1.79
YAL004W	YAL004W	YPL107W	Q02873	248 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	CWC21	Q03375	135 aa	Known RBP	3.84	□□□□□ -1.79
YAL004W	YAL004W	YPL260W	Q08977	551 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	PCD1	Q12524	340 aa		3.84	□□□□□ -1.79
YAL004W	YAL004W	CPA2	P03965	1118 aa	Known RBP	3.83	□□□□□ -1.8
YAL004W	YAL004W	GLN4	P13188	809 aa	Known RBP	3.83	□□□□□ -1.8
YAL004W	YAL004W	CMP2	P14747	604 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	LCB1	P25045	558 aa	Known RBP	3.83	□□□□□ -1.8
YAL004W	YAL004W	ADK2	P26364	225 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	MGM1	P32266	881 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	LOT5	P34234	306 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	SAP190	P36123	1033 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	SET3	P36124	751 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	LAS1	P36146	502 aa	Predicted RBP	3.83	□□□□□ -1.8
YAL004W	YAL004W	YKR078W	P36158	585 aa	Known RBP	3.83	□□□□□ -1.8
YAL004W	YAL004W	MAL33	P38157	468 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	TSL1	P38427	1098 aa	Known RBP	3.83	□□□□□ -1.8
YAL004W	YAL004W	RTS1	P38903	757 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.83	□□□□□ -1.8	not detected
YAL004W	YAL004W	STT3	P39007	718 aa	Known RBP	3.83	□□□□□ -1.8
YAL004W	YAL004W	VID28	P40547	921 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	DUO1	P53168	247 aa	Known RBP	3.83	□□□□□ -1.8
YAL004W	YAL004W	NOG2	P53742	486 aa	Known RBP	3.83	□□□□□ -1.8
YAL004W	YAL004W	VPS75	P53853	264 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	OAZ1	Q02803	292 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	UBX2	Q04228	584 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	ERB1	Q04660	807 aa	Known RBP	3.83	□□□□□ -1.8
YAL004W	YAL004W	RSF1	Q05043	376 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	ARP9	Q05123	467 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	CRR1	Q05790	422 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	IWR1	Q07532	353 aa	Predicted RBP	3.83	□□□□□ -1.8
YAL004W	YAL004W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.83	□□□□□ -1.8	not detected
YAL004W	YAL004W	NGL1	Q08213	363 aa	Known RBP	3.83	□□□□□ -1.8
YAL004W	YAL004W	KEL3	Q08979	651 aa	Predicted RBP	3.83	□□□□□ -1.8
YAL004W	YAL004W	PUS9	Q12069	462 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	YOR111W	Q99210	232 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	TY4B-H	P0C2J7	1802 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	TY4B-J	P47024	1803 aa		3.83	□□□□□ -1.8
YAL004W	YAL004W	SWI6	P09959	803 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	SIR1	P21691	654 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	PRP28	P23394	588 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	SED4	P25365	1065 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	OCA4	P25366	362 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	RRP7	P25368	297 aa	Predicted RBP	3.82	□□□□□ -1.8
YAL004W	YAL004W	SPB1	P25582	841 aa	Predicted RBP	3.82	□□□□□ -1.8
YAL004W	YAL004W	KRE2	P27809	442 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	HXT4	P32467	576 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	GCS1	P35197	352 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	SWH1	P35845	1188 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	SPT8	P38915	602 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	SSP120	P39931	234 aa	Known RBP	3.82	□□□□□ -1.8
YAL004W	YAL004W	YER158C	P40095	573 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	YJR061W	P40355	935 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	GCD10	P41814	478 aa		3.82	□□□□□ -1.8
YAL004W	YAL004W	SSU1	P41930	458 aa		3.82	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms