RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 ZRANB2O95218 330 aaKnown RBP eCLIP22.99■■□□□ 1.273e-6■■■■■ 27.8
SYNGAP1-227ENST00000638142 PNMA6AP0CW24 399 aaPredicted RBP22.99■■□□□ 1.27
SYNGAP1-227ENST00000638142 ERCC5P28715 1186 aaPredicted RBP22.99■■□□□ 1.27
SYNGAP1-227ENST00000638142 PTPN21Q16825 1174 aa22.99■■□□□ 1.27
SYNGAP1-227ENST00000638142 RNF41Q9H4P4 317 aaPredicted RBP22.99■■□□□ 1.27
SYNGAP1-227ENST00000638142 NUP98P52948 1817 aa22.99■■□□□ 1.27
SYNGAP1-227ENST00000638142 ACTN4O43707 911 aaKnown RBP22.99■■□□□ 1.27
SYNGAP1-227ENST00000638142 CT47A1Q5JQC4 288 aaPredicted RBP22.99■■□□□ 1.27
SYNGAP1-227ENST00000638142 RRP12Q5JTH9 1297 aaKnown RBP22.99■■□□□ 1.27
SYNGAP1-227ENST00000638142 CASQ1P31415 396 aa22.98■■□□□ 1.27
SYNGAP1-227ENST00000638142 PLCD1P51178 756 aa22.98■■□□□ 1.27
SYNGAP1-227ENST00000638142 HSP90AA4PQ58FG1 418 aa22.98■■□□□ 1.27
SYNGAP1-227ENST00000638142 CCDC34Q96HJ3 373 aa22.98■■□□□ 1.27
SYNGAP1-227ENST00000638142 TOMM22Q9NS69 142 aa22.98■■□□□ 1.27
SYNGAP1-227ENST00000638142 RAI14Q9P0K7 980 aa22.98■■□□□ 1.27
SYNGAP1-227ENST00000638142 ZBTB1Q9Y2K1 713 aa22.98■■□□□ 1.27
SYNGAP1-227ENST00000638142 ITGB4P16144 1822 aa22.98■■□□□ 1.27
SYNGAP1-227ENST00000638142 NR5A1Q13285 461 aa22.98■■□□□ 1.27
SYNGAP1-227ENST00000638142 SLC4A4Q9Y6R1 1079 aa22.98■■□□□ 1.27
SYNGAP1-227ENST00000638142 GNG11P61952 73 aa22.97■■□□□ 1.27
SYNGAP1-227ENST00000638142 MAP3K9P80192 1104 aa22.97■■□□□ 1.27
SYNGAP1-227ENST00000638142 LCORLQ8N3X6 602 aa22.97■■□□□ 1.27
SYNGAP1-227ENST00000638142 FANCBQ8NB91 859 aa22.97■■□□□ 1.27
SYNGAP1-227ENST00000638142 ZKSCAN3Q9BRR0 538 aa22.97■■□□□ 1.27
SYNGAP1-227ENST00000638142 PRKAB2O43741 272 aa22.97■■□□□ 1.27
SYNGAP1-227ENST00000638142 TRMT44Q8IYL2 757 aaKnown RBP22.97■■□□□ 1.27
SYNGAP1-227ENST00000638142 ZNF34Q8IZ26 560 aa22.97■■□□□ 1.27
SYNGAP1-227ENST00000638142 ZNF654Q8IZM8 581 aa22.97■■□□□ 1.27
SYNGAP1-227ENST00000638142 BCORQ6W2J9 1755 aa22.96■■□□□ 1.27
SYNGAP1-227ENST00000638142 ATP8B1O43520 1251 aa22.96■■□□□ 1.27
SYNGAP1-227ENST00000638142 NR1I3Q14994 352 aa22.96■■□□□ 1.27
SYNGAP1-227ENST00000638142 PPP2R5BQ15173 497 aa22.96■■□□□ 1.27
SYNGAP1-227ENST00000638142 ZNF827Q17R98 1081 aa22.96■■□□□ 1.27
SYNGAP1-227ENST00000638142 ST7Q9NRC1 585 aa22.96■■□□□ 1.27
SYNGAP1-227ENST00000638142 A0A1B0GTH6 734 aa22.96■■□□□ 1.27
SYNGAP1-227ENST00000638142 ADKP55263 362 aaKnown RBP22.96■■□□□ 1.27
SYNGAP1-227ENST00000638142 TOGARAM2Q6ZUX3 1019 aa22.96■■□□□ 1.27
SYNGAP1-227ENST00000638142 DZIP3Q86Y13 1208 aaKnown RBP22.96■■□□□ 1.27
SYNGAP1-227ENST00000638142 SLC4A9Q96Q91 983 aa22.96■■□□□ 1.27
SYNGAP1-227ENST00000638142 MED15Q96RN5 788 aa22.96■■□□□ 1.27
SYNGAP1-227ENST00000638142 RNF26Q9BY78 433 aaPredicted RBP22.96■■□□□ 1.27
SYNGAP1-227ENST00000638142 CSRNP2Q9H175 543 aa22.96■■□□□ 1.27
SYNGAP1-227ENST00000638142 XIRP1Q702N8 1843 aaKnown RBP22.95■■□□□ 1.27
SYNGAP1-227ENST00000638142 GRAMD1CQ8IYS0 662 aa22.95■■□□□ 1.26
SYNGAP1-227ENST00000638142 FAM177A1Q8N128 213 aaPredicted RBP22.95■■□□□ 1.26
SYNGAP1-227ENST00000638142 WDR24Q96S15 920 aa22.95■■□□□ 1.26
SYNGAP1-227ENST00000638142 AATFQ9NY61 560 aaKnown RBP eCLIP22.95■■□□□ 1.26
SYNGAP1-227ENST00000638142 MRFAP1Q9Y605 127 aa22.95■■□□□ 1.26
SYNGAP1-227ENST00000638142 BCL9O00512 1426 aa22.95■■□□□ 1.26
SYNGAP1-227ENST00000638142 IL6STP40189 918 aaPredicted RBP22.94■■□□□ 1.26
SYNGAP1-227ENST00000638142 CCDC82Q8N4S0 544 aa22.94■■□□□ 1.26
SYNGAP1-227ENST00000638142 UBAC1Q9BSL1 405 aa22.94■■□□□ 1.26
SYNGAP1-227ENST00000638142 SAMSN1Q9NSI8 373 aaKnown RBP22.94■■□□□ 1.26
SYNGAP1-227ENST00000638142 GPR161Q8N6U8 529 aaKnown RBP22.94■■□□□ 1.26
SYNGAP1-227ENST00000638142 OXER1Q8TDS5 423 aa22.94■■□□□ 1.26
SYNGAP1-227ENST00000638142 PANX2Q96RD6 677 aa22.94■■□□□ 1.26
SYNGAP1-227ENST00000638142 CABP5Q9NP86 173 aa22.94■■□□□ 1.26
SYNGAP1-227ENST00000638142 XBP1P17861 261 aa22.93■■□□□ 1.26
SYNGAP1-227ENST00000638142 PLA2G4AP47712 749 aa22.93■■□□□ 1.26
SYNGAP1-227ENST00000638142 NUP133Q8WUM0 1156 aa22.93■■□□□ 1.26
SYNGAP1-227ENST00000638142 KIFC2Q96AC6 838 aa22.93■■□□□ 1.26
SYNGAP1-227ENST00000638142 RTL9Q8NET4 1388 aa22.93■■□□□ 1.26
SYNGAP1-227ENST00000638142 TRIM75PA6NK02 468 aa22.93■■□□□ 1.26
SYNGAP1-227ENST00000638142 CMTR1Q8N1G2 835 aaKnown RBP22.93■■□□□ 1.26
SYNGAP1-227ENST00000638142 AKR1B15C9JRZ8 316 aaPredicted RBP22.92■■□□□ 1.26
SYNGAP1-227ENST00000638142 PPP2R3AQ06190 1150 aa22.92■■□□□ 1.26
SYNGAP1-227ENST00000638142 PPARAQ07869 468 aa22.92■■□□□ 1.26
SYNGAP1-227ENST00000638142 USP49Q70CQ1 688 aa22.92■■□□□ 1.26
SYNGAP1-227ENST00000638142 PLCH1Q4KWH8 1693 aa22.92■■□□□ 1.26
SYNGAP1-227ENST00000638142 NAA15Q9BXJ9 866 aaKnown RBP22.92■■□□□ 1.26
SYNGAP1-227ENST00000638142 ATP2B1P20020 1258 aa22.91■■□□□ 1.26
SYNGAP1-227ENST00000638142 AKAP17AQ02040 695 aaKnown RBP22.91■■□□□ 1.26
SYNGAP1-227ENST00000638142 SPATA1Q5VX52 437 aa22.91■■□□□ 1.26
SYNGAP1-227ENST00000638142 SNAP23O00161 211 aa22.91■■□□□ 1.26
SYNGAP1-227ENST00000638142 BMP15O95972 392 aa22.91■■□□□ 1.26
SYNGAP1-227ENST00000638142 CCDC175P0C221 793 aa22.91■■□□□ 1.26
SYNGAP1-227ENST00000638142 CYP2C19P33261 490 aa22.91■■□□□ 1.26
SYNGAP1-227ENST00000638142 SEC23AQ15436 765 aa22.91■■□□□ 1.26
SYNGAP1-227ENST00000638142 RSRC2Q7L4I2 434 aaKnown RBP22.91■■□□□ 1.26
SYNGAP1-227ENST00000638142 ESR2Q92731 530 aa22.91■■□□□ 1.26
SYNGAP1-227ENST00000638142 SEC31BQ9NQW1 1179 aa22.91■■□□□ 1.26
SYNGAP1-227ENST00000638142 APTXQ7Z2E3 356 aaKnown RBP22.9■■□□□ 1.26
SYNGAP1-227ENST00000638142 DHX58Q96C10 678 aa22.9■■□□□ 1.26
SYNGAP1-227ENST00000638142 CALCOCO1Q9P1Z2 691 aa22.9■■□□□ 1.26
SYNGAP1-227ENST00000638142 ANAPC4Q9UJX5 808 aa22.9■■□□□ 1.26
SYNGAP1-227ENST00000638142 SLIT2O94813 1529 aa22.9■■□□□ 1.26
SYNGAP1-227ENST00000638142 SH3RF1Q7Z6J0 888 aa22.9■■□□□ 1.26
SYNGAP1-227ENST00000638142 FERMT2Q96AC1 680 aa22.9■■□□□ 1.26
SYNGAP1-227ENST00000638142 LRP2BPQ9P2M1 347 aa22.9■■□□□ 1.26
SYNGAP1-227ENST00000638142 NHSL1Q5SYE7 1610 aa22.9■■□□□ 1.26
SYNGAP1-227ENST00000638142 TNKSO95271 1327 aa22.9■■□□□ 1.26
SYNGAP1-227ENST00000638142 MYH6P13533 1939 aa22.89■■□□□ 1.26
SYNGAP1-227ENST00000638142 SEMA3EO15041 775 aa22.89■■□□□ 1.26
SYNGAP1-227ENST00000638142 KRT2P35908 639 aa22.89■■□□□ 1.26
SYNGAP1-227ENST00000638142 BCAMP50895 628 aa22.89■■□□□ 1.26
SYNGAP1-227ENST00000638142 MIGA1Q8NAN2 632 aa22.89■■□□□ 1.26
SYNGAP1-227ENST00000638142 RABGGTAQ92696 567 aa22.89■■□□□ 1.26
SYNGAP1-227ENST00000638142 CTAGE1Q96RT6 745 aa22.89■■□□□ 1.26
SYNGAP1-227ENST00000638142 PODXL2Q9NZ53 605 aa22.89■■□□□ 1.26
SYNGAP1-227ENST00000638142 SYNRGQ9UMZ2 1314 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms