RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 SLURP2P0DP57 97 aa17.75■□□□□ 0.43
SCN8A-214ENST00000637709 TFAP4Q01664 338 aa17.75■□□□□ 0.43
SCN8A-214ENST00000637709 CATIPQ7Z7H3 387 aa17.75■□□□□ 0.43
SCN8A-214ENST00000637709 FMR1NBQ8N0W7 255 aaPredicted RBP17.75■□□□□ 0.43
SCN8A-214ENST00000637709 ATP8A2Q9NTI2 1148 aa17.75■□□□□ 0.43
SCN8A-214ENST00000637709 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.75■□□□□ 0.43
SCN8A-214ENST00000637709 PPEF1O14829 653 aaPredicted RBP17.74■□□□□ 0.43
SCN8A-214ENST00000637709 MMP1P03956 469 aa17.74■□□□□ 0.43
SCN8A-214ENST00000637709 ZNF165P49910 485 aa17.74■□□□□ 0.43
SCN8A-214ENST00000637709 TOB1P50616 345 aaPredicted RBP17.74■□□□□ 0.43
SCN8A-214ENST00000637709 TROAPQ12815 778 aa17.74■□□□□ 0.43
SCN8A-214ENST00000637709 AXDND1Q5T1B0 1012 aaPredicted RBP17.74■□□□□ 0.43
SCN8A-214ENST00000637709 PFKFB1P16118 471 aa17.74■□□□□ 0.43
SCN8A-214ENST00000637709 CLCN1P35523 988 aa17.74■□□□□ 0.43
SCN8A-214ENST00000637709 SPTY2D1Q68D10 685 aaPredicted RBP17.74■□□□□ 0.43
SCN8A-214ENST00000637709 RBM43Q6ZSC3 357 aaKnown RBP17.74■□□□□ 0.43
SCN8A-214ENST00000637709 CPVLQ9H3G5 476 aa17.74■□□□□ 0.43
SCN8A-214ENST00000637709 KCNQ5Q9NR82 932 aa17.74■□□□□ 0.43
SCN8A-214ENST00000637709 IL17RBQ9NRM6 502 aa17.74■□□□□ 0.43
SCN8A-214ENST00000637709 MAST2Q6P0Q8 1798 aa17.73■□□□□ 0.43
SCN8A-214ENST00000637709 WNT7AO00755 349 aa17.73■□□□□ 0.43
SCN8A-214ENST00000637709 PKN1Q16512 942 aa17.73■□□□□ 0.43
SCN8A-214ENST00000637709 NOSTRINQ8IVI9 506 aa17.73■□□□□ 0.43
SCN8A-214ENST00000637709 KCNG4Q8TDN1 519 aa17.73■□□□□ 0.43
SCN8A-214ENST00000637709 MAP3K14Q99558 947 aa17.73■□□□□ 0.43
SCN8A-214ENST00000637709 RTFDC1Q9BY42 306 aaPredicted RBP17.73■□□□□ 0.43
SCN8A-214ENST00000637709 CABP5Q9NP86 173 aa17.73■□□□□ 0.43
SCN8A-214ENST00000637709 PCDHB6Q9Y5E3 794 aa17.73■□□□□ 0.43
SCN8A-214ENST00000637709 CDK5RAP2Q96SN8 1893 aa17.73■□□□□ 0.43
SCN8A-214ENST00000637709 U2AF2P26368 475 aaKnown RBP eCLIP17.73■□□□□ 0.43
SCN8A-214ENST00000637709 PICALMQ13492 652 aa17.73■□□□□ 0.43
SCN8A-214ENST00000637709 SHC4Q6S5L8 630 aa17.73■□□□□ 0.43
SCN8A-214ENST00000637709 SRBD1Q8N5C6 995 aaKnown RBP17.73■□□□□ 0.43
SCN8A-214ENST00000637709 MKNK2Q9HBH9 465 aa17.73■□□□□ 0.43
SCN8A-214ENST00000637709 ARPP21Q9UBL0 812 aaPredicted RBP17.73■□□□□ 0.43
SCN8A-214ENST00000637709 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.73■□□□□ 0.43
SCN8A-214ENST00000637709 DEXIO95424 95 aa17.72■□□□□ 0.43
SCN8A-214ENST00000637709 SCNN1DP51172 638 aa17.72■□□□□ 0.43
SCN8A-214ENST00000637709 SLC39A14Q15043 492 aa17.72■□□□□ 0.43
SCN8A-214ENST00000637709 PTPAQ15257 358 aa17.72■□□□□ 0.43
SCN8A-214ENST00000637709 TMTC2Q8N394 836 aa17.72■□□□□ 0.43
SCN8A-214ENST00000637709 ZNF622Q969S3 477 aaKnown RBP eCLIP17.72■□□□□ 0.43
SCN8A-214ENST00000637709 MKRN1Q9UHC7 482 aaKnown RBP17.72■□□□□ 0.43
SCN8A-214ENST00000637709 PDS5AQ29RF7 1337 aaKnown RBP17.72■□□□□ 0.43
SCN8A-214ENST00000637709 ZNF202O95125 648 aa17.72■□□□□ 0.43
SCN8A-214ENST00000637709 YEATS4O95619 227 aa17.72■□□□□ 0.43
SCN8A-214ENST00000637709 RBM6P78332 1123 aaKnown RBP17.72■□□□□ 0.43
SCN8A-214ENST00000637709 AKAP17AQ02040 695 aaKnown RBP17.72■□□□□ 0.43
SCN8A-214ENST00000637709 C12orf60Q5U649 245 aa17.72■□□□□ 0.43
SCN8A-214ENST00000637709 ATL3Q6DD88 541 aa17.72■□□□□ 0.43
SCN8A-214ENST00000637709 RCSD1Q6JBY9 416 aa17.72■□□□□ 0.43
SCN8A-214ENST00000637709 STAG2Q8N3U4 1231 aa17.72■□□□□ 0.43
SCN8A-214ENST00000637709 ATP2B4P23634 1241 aa17.71■□□□□ 0.43
SCN8A-214ENST00000637709 PDE4BQ07343 736 aa17.71■□□□□ 0.43
SCN8A-214ENST00000637709 UVSSAQ2YD98 709 aa17.71■□□□□ 0.43
SCN8A-214ENST00000637709 STX8Q9UNK0 236 aa17.71■□□□□ 0.43
SCN8A-214ENST00000637709 STK36Q9NRP7 1315 aa17.71■□□□□ 0.43
SCN8A-214ENST00000637709 ADAMTSL1Q8N6G6 1762 aa17.71■□□□□ 0.43
SCN8A-214ENST00000637709 CCDC196A0A1B0GTZ2 297 aa17.71■□□□□ 0.42
SCN8A-214ENST00000637709 BBOX1O75936 387 aa17.71■□□□□ 0.42
SCN8A-214ENST00000637709 GOLGA8HP0CJ92 632 aa17.71■□□□□ 0.42
SCN8A-214ENST00000637709 FUT2Q10981 343 aa17.71■□□□□ 0.42
SCN8A-214ENST00000637709 TEX11Q8IYF3 940 aa17.71■□□□□ 0.42
SCN8A-214ENST00000637709 NOL7Q9UMY1 257 aaKnown RBP17.71■□□□□ 0.42
SCN8A-214ENST00000637709 FGRP09769 529 aa17.7■□□□□ 0.42
SCN8A-214ENST00000637709 NOL10Q9BSC4 688 aaKnown RBP17.7■□□□□ 0.42
SCN8A-214ENST00000637709 PDGFDQ9GZP0 370 aaPredicted RBP17.7■□□□□ 0.42
SCN8A-214ENST00000637709 PCDHAC2Q9Y5I4 1007 aa17.7■□□□□ 0.42
SCN8A-214ENST00000637709 NAV1Q8NEY1 1877 aa17.7■□□□□ 0.42
SCN8A-214ENST00000637709 FOXN1O15353 648 aa17.7■□□□□ 0.42
SCN8A-214ENST00000637709 BAG3O95817 575 aa17.7■□□□□ 0.42
SCN8A-214ENST00000637709 SRGNP10124 158 aa17.7■□□□□ 0.42
SCN8A-214ENST00000637709 SAFBQ15424 915 aaKnown RBP eCLIP17.7■□□□□ 0.42
SCN8A-214ENST00000637709 CLEC10AQ8IUN9 316 aa17.7■□□□□ 0.42
SCN8A-214ENST00000637709 GPKOWQ92917 476 aaPredicted RBP eCLIP17.7■□□□□ 0.42
SCN8A-214ENST00000637709 AKT1S1Q96B36 256 aa17.7■□□□□ 0.42
SCN8A-214ENST00000637709 DBNDD1Q9H9R9 158 aa17.7■□□□□ 0.42
SCN8A-214ENST00000637709 CCDC39Q9UFE4 941 aa17.7■□□□□ 0.42
SCN8A-214ENST00000637709 SLC3A2P08195 630 aaKnown RBP17.69■□□□□ 0.42
SCN8A-214ENST00000637709 TSPY3P0CV98 308 aa17.69■□□□□ 0.42
SCN8A-214ENST00000637709 TSPY8P0CW00 308 aa17.69■□□□□ 0.42
SCN8A-214ENST00000637709 IL1R1P14778 569 aa17.69■□□□□ 0.42
SCN8A-214ENST00000637709 DPCR1Q3MIW9 517 aa17.69■□□□□ 0.42
SCN8A-214ENST00000637709 PDILTQ8N807 584 aa17.69■□□□□ 0.42
SCN8A-214ENST00000637709 NRBP1Q9UHY1 535 aa17.69■□□□□ 0.42
SCN8A-214ENST00000637709 ORC4O43929 436 aa17.69■□□□□ 0.42
SCN8A-214ENST00000637709 HOXA10P31260 410 aaPredicted RBP17.69■□□□□ 0.42
SCN8A-214ENST00000637709 USP49Q70CQ1 688 aa17.69■□□□□ 0.42
SCN8A-214ENST00000637709 CERS5Q8N5B7 392 aa17.69■□□□□ 0.42
SCN8A-214ENST00000637709 ZKSCAN5Q9Y2L8 839 aa17.69■□□□□ 0.42
SCN8A-214ENST00000637709 CHRNA5P30532 468 aa17.68■□□□□ 0.42
SCN8A-214ENST00000637709 CTCFLQ8NI51 663 aaPredicted RBP17.68■□□□□ 0.42
SCN8A-214ENST00000637709 WASF1Q92558 559 aa17.68■□□□□ 0.42
SCN8A-214ENST00000637709 TRIM5Q9C035 493 aa17.68■□□□□ 0.42
SCN8A-214ENST00000637709 CNTNAP5Q8WYK1 1306 aa17.68■□□□□ 0.42
SCN8A-214ENST00000637709 COL11A2P13942 1736 aaPredicted RBP17.68■□□□□ 0.42
SCN8A-214ENST00000637709 A0A1W2PQ27 194 aa17.67■□□□□ 0.42
SCN8A-214ENST00000637709 A0A1W2PQ64 194 aa17.67■□□□□ 0.42
SCN8A-214ENST00000637709 A0A1W2PQD8 194 aa17.67■□□□□ 0.42
SCN8A-214ENST00000637709 SYKP43405 635 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms