RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 ARHGAP42A6NI28 874 aa10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 TBCAO75347 108 aaKnown RBP10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 CNGA1P29973 690 aa10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 SNX16P57768 344 aa10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 LGSNQ5TDP6 509 aa10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 SPATA31E1Q6ZUB1 1445 aa10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 CCDC197Q8NCU1 140 aa10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 CCT6BQ92526 530 aa10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 ZNF215Q9UL58 517 aaPredicted RBP10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 SBNO2Q9Y2G9 1366 aa10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 RNMTO43148 476 aaKnown RBP10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 EEF2P13639 858 aaKnown RBP10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 ATP2B3Q16720 1220 aa10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 ST13P4Q8IZP2 240 aaPredicted RBP10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 SIRT1Q96EB6 747 aa10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 PALMDQ9NP74 551 aa10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 TNNQ9UQP3 1299 aa10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.77□□□□□ -0.69
CACNA1A-242ENST00000637485 KIF24Q5T7B8 1368 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 APOEP02649 317 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 GFAPP14136 432 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 PPP1R2P41236 205 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 HNRNPH2P55795 449 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 ANKRD20A4Q4UJ75 823 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 ANKRD20A8PQ5CZ79 823 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 ANKRD20A2Q5SQ80 823 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 ANKRD20A1Q5TYW2 823 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 TTC19Q6DKK2 380 aaPredicted RBP10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 SNRKQ9NRH2 765 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 TMEM110-MUSTN1A8MSY1 372 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 SUN1O94901 812 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 GAS8O95995 478 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 MCM7P33993 719 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 RNASELQ05823 741 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 LMBR1LQ6UX01 489 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 TSC1Q92574 1164 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 SPDL1Q96EA4 605 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 NOP53Q9NZM5 478 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 AOX1Q06278 1338 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 LOC102724159A0A0B4J2E5 919 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 IL2RBP14784 551 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 PWP2Q15269 919 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 NLRP7Q8WX94 980 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 CRNKL1Q9BZJ0 848 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 FAM204AQ9H8W3 233 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 CTNNA1P35221 906 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 LMNB2Q03252 620 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 UAP1Q16222 522 aaPredicted RBP10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 CCDC93Q567U6 631 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 ARHGAP18Q8N392 663 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 EHMT1Q9H9B1 1298 aa10.76□□□□□ -0.69
CACNA1A-242ENST00000637485 GCP02774 474 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 KCNA4P22459 653 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 IFT88Q13099 833 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 NME8Q8N427 588 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 RGS22Q8NE09 1264 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 BRF1Q92994 677 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 IWS1Q96ST2 819 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 CTTNBP2NLQ9P2B4 639 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 KDM5DQ9BY66 1539 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 RBM26Q5T8P6 1007 aaKnown RBP10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 TADA2BQ86TJ2 420 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 C16orf71Q8IYS4 520 aaPredicted RBP10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 ZGPATQ8N5A5 531 aaKnown RBP10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 GFM2Q969S9 779 aaKnown RBP10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 NGLY1Q96IV0 654 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 PDE11AQ9HCR9 933 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 KDM2BQ8NHM5 1336 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 SLC39A6Q13433 755 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 HELBQ8NG08 1087 aaPredicted RBP10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 RABGGTAQ92696 567 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 NUP58Q9BVL2 599 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 RAB17Q9H0T7 212 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 DDX41Q9UJV9 622 aaKnown RBP10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 SUFUQ9UMX1 484 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 NUB1Q9Y5A7 615 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 MBD5Q9P267 1494 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 ARHGEF10O15013 1369 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 PCDH11XQ9BZA7 1347 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 PCDH11YQ9BZA8 1340 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 ATICP31939 592 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 ARID5AQ03989 594 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 NMIQ13287 307 aaPredicted RBP10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 P3H4Q92791 437 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 CUL5Q93034 780 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 KAT14Q9H8E8 782 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 PFDN4Q9NQP4 134 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 PAG1Q9NWQ8 432 aa10.75□□□□□ -0.69
CACNA1A-242ENST00000637485 MAP3K7O43318 606 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 FANCCQ00597 558 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 NBPF9Q3BBW0 867 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 LRRC59Q96AG4 307 aaKnown RBP10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 RILPQ96NA2 401 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 PHF23Q9BUL5 403 aaPredicted RBP10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 CLSTN2Q9H4D0 955 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 KLF18A0A0U1RQI7 1052 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 HAND2P61296 217 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 RILPL1Q5EBL4 403 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 BRAPQ7Z569 592 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 UBL4BQ8N7F7 174 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms