RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 SHMT1P34896 483 aa15.75■□□□□ 0.11
LINC00643-207ENST00000637212 TOB2Q14106 344 aaPredicted RBP15.75■□□□□ 0.11
LINC00643-207ENST00000637212 SUPT20HL1Q3ZLR7 823 aa15.75■□□□□ 0.11
LINC00643-207ENST00000637212 PPP4R3BQ5MIZ7 849 aa15.75■□□□□ 0.11
LINC00643-207ENST00000637212 CHST3Q7LGC8 479 aa15.75■□□□□ 0.11
LINC00643-207ENST00000637212 DGKHQ86XP1 1220 aa15.75■□□□□ 0.11
LINC00643-207ENST00000637212 SLC44A5Q8NCS7 719 aa15.75■□□□□ 0.11
LINC00643-207ENST00000637212 CHMP4CQ96CF2 233 aa15.75■□□□□ 0.11
LINC00643-207ENST00000637212 ZNF274Q96GC6 653 aaPredicted RBP15.75■□□□□ 0.11
LINC00643-207ENST00000637212 ZSCAN10Q96SZ4 725 aaPredicted RBP15.75■□□□□ 0.11
LINC00643-207ENST00000637212 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.75■□□□□ 0.11
LINC00643-207ENST00000637212 GGA3Q9NZ52 723 aa15.75■□□□□ 0.11
LINC00643-207ENST00000637212 DAXXQ9UER7 740 aaPredicted RBP15.75■□□□□ 0.11
LINC00643-207ENST00000637212 ANGEL1Q9UNK9 670 aaKnown RBP15.75■□□□□ 0.11
LINC00643-207ENST00000637212 SH2B2O14492 632 aaPredicted RBP15.74■□□□□ 0.11
LINC00643-207ENST00000637212 CD2BP2O95400 341 aaKnown RBP15.74■□□□□ 0.11
LINC00643-207ENST00000637212 TSPY3P0CV98 308 aa15.74■□□□□ 0.11
LINC00643-207ENST00000637212 TSPY8P0CW00 308 aa15.74■□□□□ 0.11
LINC00643-207ENST00000637212 CERKLQ49MI3 558 aaPredicted RBP15.74■□□□□ 0.11
LINC00643-207ENST00000637212 TMEM67Q5HYA8 995 aa15.74■□□□□ 0.11
LINC00643-207ENST00000637212 FAM47AQ5JRC9 791 aa15.74■□□□□ 0.11
LINC00643-207ENST00000637212 SGMS1Q86VZ5 419 aa15.74■□□□□ 0.11
LINC00643-207ENST00000637212 SULF1Q8IWU6 871 aa15.74■□□□□ 0.11
LINC00643-207ENST00000637212 NKX2-3Q8TAU0 364 aa15.74■□□□□ 0.11
LINC00643-207ENST00000637212 TCEANC2Q96MN5 208 aa15.74■□□□□ 0.11
LINC00643-207ENST00000637212 SH2B1Q9NRF2 756 aaPredicted RBP15.74■□□□□ 0.11
LINC00643-207ENST00000637212 NOVP48745 357 aa15.73■□□□□ 0.11
LINC00643-207ENST00000637212 WTAPQ15007 396 aa15.73■□□□□ 0.11
LINC00643-207ENST00000637212 SEC23AQ15436 765 aa15.73■□□□□ 0.11
LINC00643-207ENST00000637212 DCAF15Q66K64 600 aa15.73■□□□□ 0.11
LINC00643-207ENST00000637212 BRF1Q92994 677 aa15.73■□□□□ 0.11
LINC00643-207ENST00000637212 LRRC2Q9BYS8 371 aa15.73■□□□□ 0.11
LINC00643-207ENST00000637212 DNAJC18Q9H819 358 aa15.73■□□□□ 0.11
LINC00643-207ENST00000637212 RRAGCQ9HB90 399 aa15.73■□□□□ 0.11
LINC00643-207ENST00000637212 GINM1Q9NU53 330 aa15.73■□□□□ 0.11
LINC00643-207ENST00000637212 TIAM2Q8IVF5 1701 aa15.72■□□□□ 0.11
LINC00643-207ENST00000637212 CDC37L1Q7L3B6 337 aa15.72■□□□□ 0.11
LINC00643-207ENST00000637212 TMX3Q96JJ7 454 aa15.72■□□□□ 0.11
LINC00643-207ENST00000637212 LY9Q9HBG7 655 aa15.72■□□□□ 0.11
LINC00643-207ENST00000637212 TPCN1Q9ULQ1 816 aa15.72■□□□□ 0.11
LINC00643-207ENST00000637212 IGKV6D-41A0A0C4DH26 115 aa15.71■□□□□ 0.11
LINC00643-207ENST00000637212 RCAN1P53805 252 aa15.71■□□□□ 0.11
LINC00643-207ENST00000637212 NBPF12Q5TAG4 269 aaPredicted RBP15.71■□□□□ 0.11
LINC00643-207ENST00000637212 SYNE3Q6ZMZ3 975 aa15.71■□□□□ 0.11
LINC00643-207ENST00000637212 KRT26Q7Z3Y9 468 aa15.71■□□□□ 0.11
LINC00643-207ENST00000637212 ENAHQ8N8S7 591 aaPredicted RBP15.71■□□□□ 0.11
LINC00643-207ENST00000637212 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.71■□□□□ 0.11
LINC00643-207ENST00000637212 CABP5Q9NP86 173 aa15.71■□□□□ 0.11
LINC00643-207ENST00000637212 IL17RBQ9NRM6 502 aa15.71■□□□□ 0.11
LINC00643-207ENST00000637212 ADAMTSL1Q8N6G6 1762 aa15.71■□□□□ 0.11
LINC00643-207ENST00000637212 TNKSO95271 1327 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 CCDC69A6NI79 296 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 PHF20L1A8MW92 1017 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 AKR1B1P15121 316 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 PDIA3P30101 505 aaKnown RBP15.7■□□□□ 0.1
LINC00643-207ENST00000637212 APOBRQ0VD83 1088 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 CUL4AQ13619 759 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 PPP2R5BQ15173 497 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 ABCB5Q2M3G0 1257 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 EAPPQ56P03 285 aaPredicted RBP15.7■□□□□ 0.1
LINC00643-207ENST00000637212 IFIT1BQ5T764 474 aaKnown RBP15.7■□□□□ 0.1
LINC00643-207ENST00000637212 NFXL1Q6ZNB6 911 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 TMEM179Q6ZVK1 233 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 MIGA2Q7L4E1 593 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 ZKSCAN3Q9BRR0 538 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 ZNF341Q9BYN7 854 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 KANSL2Q9H9L4 492 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 GPHNQ9NQX3 736 aaPredicted RBP15.7■□□□□ 0.1
LINC00643-207ENST00000637212 MTMR4Q9NYA4 1195 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 ZNF112Q9UJU3 913 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 SLC12A7Q9Y666 1083 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 PLIN4Q96Q06 1357 aa15.7■□□□□ 0.1
LINC00643-207ENST00000637212 CTNND1O60716 968 aaKnown RBP15.69■□□□□ 0.1
LINC00643-207ENST00000637212 PFKFB2O60825 505 aa15.69■□□□□ 0.1
LINC00643-207ENST00000637212 CAP2P40123 477 aa15.69■□□□□ 0.1
LINC00643-207ENST00000637212 ME3Q16798 604 aa15.69■□□□□ 0.1
LINC00643-207ENST00000637212 RCSD1Q6JBY9 416 aa15.69■□□□□ 0.1
LINC00643-207ENST00000637212 USP48Q86UV5 1035 aa15.69■□□□□ 0.1
LINC00643-207ENST00000637212 CDAN1Q8IWY9 1227 aa15.69■□□□□ 0.1
LINC00643-207ENST00000637212 MKL1Q969V6 931 aa15.69■□□□□ 0.1
LINC00643-207ENST00000637212 INTS4Q96HW7 963 aaKnown RBP15.69■□□□□ 0.1
LINC00643-207ENST00000637212 LARP6Q9BRS8 491 aaKnown RBP15.69■□□□□ 0.1
LINC00643-207ENST00000637212 SLKQ9H2G2 1235 aaPredicted RBP15.69■□□□□ 0.1
LINC00643-207ENST00000637212 BRPF3Q9ULD4 1205 aa15.69■□□□□ 0.1
LINC00643-207ENST00000637212 SCAF8Q9UPN6 1271 aaKnown RBP15.69■□□□□ 0.1
LINC00643-207ENST00000637212 CLEC11AQ9Y240 323 aa15.69■□□□□ 0.1
LINC00643-207ENST00000637212 WDR90Q96KV7 1748 aa15.68■□□□□ 0.1
LINC00643-207ENST00000637212 KLF18A0A0U1RQI7 1052 aa15.68■□□□□ 0.1
LINC00643-207ENST00000637212 FAM196BA6NMK8 535 aa15.68■□□□□ 0.1
LINC00643-207ENST00000637212 MPHOSPH10O00566 681 aaKnown RBP15.68■□□□□ 0.1
LINC00643-207ENST00000637212 DHX16O60231 1041 aaKnown RBP15.68■□□□□ 0.1
LINC00643-207ENST00000637212 NMT2O60551 498 aa15.68■□□□□ 0.1
LINC00643-207ENST00000637212 CALM1P0DP23 149 aa15.68■□□□□ 0.1
LINC00643-207ENST00000637212 CALM2P0DP24 149 aa15.68■□□□□ 0.1
LINC00643-207ENST00000637212 CALM3P0DP25 149 aa15.68■□□□□ 0.1
LINC00643-207ENST00000637212 TOP1P11387 765 aaKnown RBP15.68■□□□□ 0.1
LINC00643-207ENST00000637212 CATIPQ7Z7H3 387 aa15.68■□□□□ 0.1
LINC00643-207ENST00000637212 LDHDQ86WU2 507 aa15.68■□□□□ 0.1
LINC00643-207ENST00000637212 MAP3K14Q99558 947 aa15.68■□□□□ 0.1
LINC00643-207ENST00000637212 NYAP2Q9P242 653 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms