RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 SMARCE1Q969G3 411 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 CCDC34Q96HJ3 373 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 ANKRD2Q9GZV1 360 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 BIN2Q9UBW5 565 aaPredicted RBP8.59□□□□□ -1.03
PKP4-217ENST00000628904 SEC63Q9UGP8 760 aaKnown RBP8.59□□□□□ -1.03
PKP4-217ENST00000628904 PCDHA5Q9Y5H7 936 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 CLRN2A0PK11 232 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 NPM3O75607 178 aaKnown RBP8.59□□□□□ -1.03
PKP4-217ENST00000628904 KRI1Q8N9T8 703 aaKnown RBP8.59□□□□□ -1.03
PKP4-217ENST00000628904 GJA10Q969M2 543 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 PPP1R9BQ96SB3 815 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 XPO4Q9C0E2 1151 aaKnown RBP8.59□□□□□ -1.03
PKP4-217ENST00000628904 DCP1AQ9NPI6 582 aaPredicted RBP8.59□□□□□ -1.03
PKP4-217ENST00000628904 KCNQ5Q9NR82 932 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 PKD2L1Q9P0L9 805 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 HOOK1Q9UJC3 728 aaKnown RBP8.59□□□□□ -1.03
PKP4-217ENST00000628904 KRT2P35908 639 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 PRKG1Q13976 671 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 USH1GQ495M9 461 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 CLEC17AQ6ZS10 378 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 VGLL2Q8N8G2 317 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.59□□□□□ -1.03
PKP4-217ENST00000628904 CSRNP2Q9H175 543 aa8.59□□□□□ -1.03
PKP4-217ENST00000628904 PP2D1A8MPX8 630 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 EPB41L2O43491 1005 aaKnown RBP8.58□□□□□ -1.04
PKP4-217ENST00000628904 DEXIO95424 95 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 UBA7P41226 1012 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 ADALQ6DHV7 355 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 PRR5LQ6MZQ0 368 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 CDK5RAP3Q96JB5 506 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 BCL2L12Q9HB09 334 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 RNF216Q9NWF9 866 aaPredicted RBP8.58□□□□□ -1.04
PKP4-217ENST00000628904 KIAA1468Q9P260 1216 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 PARP3Q9Y6F1 533 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 TOPAZ1Q8N9V7 1692 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 ARID4AP29374 1257 aaPredicted RBP8.58□□□□□ -1.04
PKP4-217ENST00000628904 PTGDRQ13258 359 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 CCDC178Q5BJE1 867 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 KCTD1Q719H9 257 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 SMARCC2Q8TAQ2 1214 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 NSUN4Q96CB9 384 aaKnown RBP8.58□□□□□ -1.04
PKP4-217ENST00000628904 EYA3Q99504 573 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 PLA2G12BQ9BX93 195 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 USP40Q9NVE5 1235 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 FANCLQ9NW38 375 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 RCOR1Q9UKL0 485 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 TACC3Q9Y6A5 838 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 TOP1P11387 765 aaKnown RBP8.58□□□□□ -1.04
PKP4-217ENST00000628904 TXKP42681 527 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 ZNF75DP51815 510 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 NAA30Q147X3 362 aaPredicted RBP8.58□□□□□ -1.04
PKP4-217ENST00000628904 CCDC144BQ3MJ40 725 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 RRAGBQ5VZM2 374 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 SPTY2D1Q68D10 685 aaPredicted RBP8.58□□□□□ -1.04
PKP4-217ENST00000628904 BRAPQ7Z569 592 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 ILDR1Q86SU0 546 aaPredicted RBP8.58□□□□□ -1.04
PKP4-217ENST00000628904 NBPF11Q86T75 865 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 COA7Q96BR5 231 aa8.58□□□□□ -1.04
PKP4-217ENST00000628904 TRPC5Q9UL62 973 aaPredicted RBP8.58□□□□□ -1.04
PKP4-217ENST00000628904 RAD17O75943 681 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 GDF11O95390 407 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 ADKP55263 362 aaKnown RBP8.57□□□□□ -1.04
PKP4-217ENST00000628904 TXNRD1Q16881 649 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 TSGA10IPQ3SY00 556 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 GLIPR1L2Q4G1C9 344 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 CACTINQ8WUQ7 758 aaKnown RBP8.57□□□□□ -1.04
PKP4-217ENST00000628904 TBC1D7Q9P0N9 293 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 FBXO3Q9UK99 471 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 PCDHAC2Q9Y5I4 1007 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 LDHCP07864 332 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 TAL1P17542 331 aaPredicted RBP8.57□□□□□ -1.04
PKP4-217ENST00000628904 FGFR2P21802 821 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 KARSQ15046 597 aaKnown RBP8.57□□□□□ -1.04
PKP4-217ENST00000628904 TMTC2Q8N394 836 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 RBM17Q96I25 401 aaKnown RBP8.57□□□□□ -1.04
PKP4-217ENST00000628904 TANGO6Q9C0B7 1094 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 VPS16Q9H269 839 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 THRAP3Q9Y2W1 955 aaKnown RBP8.57□□□□□ -1.04
PKP4-217ENST00000628904 TCHHQ07283 1943 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 KLRF2D3W0D1 207 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 CCNT1O60563 726 aaKnown RBP8.57□□□□□ -1.04
PKP4-217ENST00000628904 KRT18P05783 430 aaKnown RBP8.57□□□□□ -1.04
PKP4-217ENST00000628904 KIF5BP33176 963 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 TXLNAP40222 546 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 EN1Q05925 392 aaPredicted RBP8.57□□□□□ -1.04
PKP4-217ENST00000628904 EARS2Q5JPH6 523 aaKnown RBP8.57□□□□□ -1.04
PKP4-217ENST00000628904 DYMQ7RTS9 669 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 FCHSD1Q86WN1 690 aa8.57□□□□□ -1.04
PKP4-217ENST00000628904 TCP10L2B9ZVM9 353 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 PRR29P0C7W0 189 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 TTC38Q5R3I4 469 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 CLEC4GQ6UXB4 293 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 CD209Q9NNX6 404 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 BMP2KQ9NSY1 1161 aaPredicted RBP8.56□□□□□ -1.04
PKP4-217ENST00000628904 NFE2L3Q9Y4A8 694 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 CTAGE5O15320 804 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 UBXN2AP68543 259 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 CBX1P83916 185 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 SF3B2Q13435 895 aaKnown RBP8.56□□□□□ -1.04
PKP4-217ENST00000628904 PTPN14Q15678 1187 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms