RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 IQUBQ8NA54 791 aa13.25□□□□□ -0.29
CHD2-205ENST00000625662 CCPG1Q9ULG6 757 aa13.25□□□□□ -0.29
CHD2-205ENST00000625662 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.25□□□□□ -0.293e-9■■■□□ 16.2
CHD2-205ENST00000625662 ACTN2P35609 894 aa13.25□□□□□ -0.29
CHD2-205ENST00000625662 ASPRV1Q53RT3 343 aa13.25□□□□□ -0.29
CHD2-205ENST00000625662 PLEKHM2Q8IWE5 1019 aa13.25□□□□□ -0.29
CHD2-205ENST00000625662 ABCC4O15439 1325 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 CNTNAP4Q9C0A0 1308 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 USH1GQ495M9 461 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 FAM212AQ96EL1 285 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 ZKSCAN3Q9BRR0 538 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 PKD2L1Q9P0L9 805 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 ZNRF3Q9ULT6 936 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 MADDQ8WXG6 1647 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 PTPRUQ92729 1446 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 hCG_1984214I3L0E3 225 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 PRDM1O75626 825 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 DDAH1O94760 285 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 APOBRQ0VD83 1088 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 ZBTB8OSQ8IWT0 167 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 ZNF713Q8N859 430 aaPredicted RBP13.24□□□□□ -0.29
CHD2-205ENST00000625662 SERPINB13Q9UIV8 391 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 REXO1Q8N1G1 1221 aaKnown RBP13.24□□□□□ -0.29
CHD2-205ENST00000625662 FAM193BQ96PV7 902 aaPredicted RBP13.24□□□□□ -0.29
CHD2-205ENST00000625662 SPAG5Q96R06 1193 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 USP44Q9H0E7 712 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 TSPYL1Q9H0U9 437 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 CD163L1Q9NR16 1453 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.24□□□□□ -0.29
CHD2-205ENST00000625662 CCDC97Q96F63 343 aaPredicted RBP13.24□□□□□ -0.29
CHD2-205ENST00000625662 HAUS7Q99871 368 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 TRPC6Q9Y210 931 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 FRMD4BQ9Y2L6 1034 aa13.24□□□□□ -0.29
CHD2-205ENST00000625662 ADAMTS13Q76LX8 1427 aa13.23□□□□□ -0.29
CHD2-205ENST00000625662 GOLGA6L10A6NI86 522 aa13.23□□□□□ -0.29
CHD2-205ENST00000625662 MCM7P33993 719 aa13.23□□□□□ -0.29
CHD2-205ENST00000625662 WDR44Q5JSH3 913 aa13.23□□□□□ -0.29
CHD2-205ENST00000625662 IFNL3Q8IZI9 196 aa13.23□□□□□ -0.29
CHD2-205ENST00000625662 NRXN1Q9ULB1 1477 aa13.23□□□□□ -0.29
CHD2-205ENST00000625662 PPRC1Q5VV67 1664 aaKnown RBP13.23□□□□□ -0.29
CHD2-205ENST00000625662 PRPHP41219 470 aa13.23□□□□□ -0.29
CHD2-205ENST00000625662 FASTKD5Q7L8L6 764 aaKnown RBP13.23□□□□□ -0.29
CHD2-205ENST00000625662 GTF3C2Q8WUA4 911 aaPredicted RBP13.23□□□□□ -0.29
CHD2-205ENST00000625662 MRPS27Q92552 414 aaKnown RBP13.23□□□□□ -0.29
CHD2-205ENST00000625662 AXIN2Q9Y2T1 843 aa13.23□□□□□ -0.29
CHD2-205ENST00000625662 RPS12P25398 132 aaKnown RBP13.23□□□□□ -0.29
CHD2-205ENST00000625662 SSX2IPQ9Y2D8 614 aa13.23□□□□□ -0.29
CHD2-205ENST00000625662 SPATA31D1Q6ZQQ2 1576 aa13.23□□□□□ -0.29
CHD2-205ENST00000625662 PNPLA6Q8IY17 1366 aa13.23□□□□□ -0.29
CHD2-205ENST00000625662 ZSCAN12O43309 604 aa13.23□□□□□ -0.29
CHD2-205ENST00000625662 TTLL1O95922 423 aa13.23□□□□□ -0.29
CHD2-205ENST00000625662 ZSCAN22P10073 491 aaPredicted RBP13.23□□□□□ -0.29
CHD2-205ENST00000625662 MED14O60244 1454 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 POTEB2H3BUK9 544 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 RPS6KB1P23443 525 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 ZSCAN10Q96SZ4 725 aaPredicted RBP13.22□□□□□ -0.29
CHD2-205ENST00000625662 NUP88Q99567 741 aaPredicted RBP13.22□□□□□ -0.29
CHD2-205ENST00000625662 PLCD4Q9BRC7 762 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 CCDC169A6NNP5 214 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 ARID4AP29374 1257 aaPredicted RBP13.22□□□□□ -0.29
CHD2-205ENST00000625662 TGFB2P61812 414 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 NFIXQ14938 502 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 HOOK3Q86VS8 718 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 PLEKHF1Q96S99 279 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 ADPGKQ9BRR6 497 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 IGHDP01880 384 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 CHST3Q7LGC8 479 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 MIER3Q7Z3K6 550 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 AMNQ9BXJ7 453 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 V9GY48 417 aaPredicted RBP13.22□□□□□ -0.29
CHD2-205ENST00000625662 CPDO75976 1380 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 TRPC3Q13507 836 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 TBC1D9BQ66K14 1250 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.22□□□□□ -0.29
CHD2-205ENST00000625662 SEC31BQ9NQW1 1179 aa13.22□□□□□ -0.29
CHD2-205ENST00000625662 KDM3AQ9Y4C1 1321 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 TMEM232C9JQI7 657 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 SPTLC2O15270 562 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 GAS7O60861 476 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 FDX1P10109 184 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 SLFN12Q8IYM2 578 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 TMX3Q96JJ7 454 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 NT5C3AQ9H0P0 336 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 HAUS2Q9NVX0 235 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 DNM3Q9UQ16 869 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 ARHGEF37A1IGU5 675 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 CHMP2AO43633 222 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 P4HA1P13674 534 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 CTDSPL2Q05D32 466 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 TFDP1Q14186 410 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 DDX12PQ92771 950 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 ALS2CR12Q96Q35 445 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 HOXC10Q9NYD6 342 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 KCNH4Q9UQ05 1017 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 GINS2Q9Y248 185 aa13.21□□□□□ -0.29
CHD2-205ENST00000625662 STX10O60499 249 aa13.21□□□□□ -0.3
CHD2-205ENST00000625662 LRRC24Q50LG9 513 aa13.21□□□□□ -0.3
CHD2-205ENST00000625662 FILIP1Q7Z7B0 1213 aa13.21□□□□□ -0.3
CHD2-205ENST00000625662 ZNF215Q9UL58 517 aaPredicted RBP13.21□□□□□ -0.3
CHD2-205ENST00000625662 TESPA1A2RU30 521 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms