RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 KAT6BQ8WYB5 2073 aa11.02□□□□□ -0.64
IGHV3-54-201ENST00000622166 COL4A1P02462 1669 aa11.02□□□□□ -0.64
IGHV3-54-201ENST00000622166 MYH2Q9UKX2 1941 aa11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 LOC102724428A0A0B4J2F2 783 aa11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 ACTN4O43707 911 aaKnown RBP11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 BMP15O95972 392 aa11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 SERPINC1P01008 464 aa11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 ZNF18P17022 549 aa11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 ATP6V1AP38606 617 aa11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 SIK1P57059 783 aa11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 RRP12Q5JTH9 1297 aaKnown RBP11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 CLEC4GQ6UXB4 293 aa11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 SMARCC1Q92922 1105 aaPredicted RBP11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 SMARCE1Q969G3 411 aa11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 ZKSCAN3Q9BRR0 538 aa11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 UBAC1Q9BSL1 405 aa11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 BCL11BQ9C0K0 894 aaPredicted RBP11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 RBM28Q9NW13 759 aaKnown RBP11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 NIP7Q9Y221 180 aaKnown RBP eCLIP11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 ZNF652Q9Y2D9 606 aa11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 PCDHB6Q9Y5E3 794 aa11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 PDS5AQ29RF7 1337 aaKnown RBP11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 SPATA31A1Q5TZJ5 1347 aa11.02□□□□□ -0.65
IGHV3-54-201ENST00000622166 COL1A1P02452 1464 aaPredicted RBP11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 LAMB1P07942 1786 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 MAST2Q6P0Q8 1798 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 SEMA3EO15041 775 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 FOXN1O15353 648 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 PRR29P0C7W0 189 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 CALM1P0DP23 149 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 CALM2P0DP24 149 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 CALM3P0DP25 149 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 TOP1P11387 765 aaKnown RBP11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 XBP1P17861 261 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 ERCC5P28715 1186 aaPredicted RBP11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 ETF1P62495 437 aaKnown RBP11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 CBX1P83916 185 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 GRIN1Q05586 938 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 DMTNQ08495 405 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 NAA30Q147X3 362 aaPredicted RBP11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 PKN1Q16512 942 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 SLC10A5Q5PT55 438 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 SH3RF1Q7Z6J0 888 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 ADGRA1Q86SQ6 560 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 TMEM139Q8IV31 216 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 REXO1L1PQ8IX06 675 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 MIGA1Q8NAN2 632 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 OXER1Q8TDS5 423 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 ZSCAN10Q96SZ4 725 aaPredicted RBP11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 PHF20Q9BVI0 1012 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 GTPBP4Q9BZE4 634 aaKnown RBP11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 TOMM22Q9NS69 142 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 INTS13Q9NVM9 706 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 FAM53CQ9NYF3 392 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 DDX41Q9UJV9 622 aaKnown RBP11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 TNKSO95271 1327 aa11.01□□□□□ -0.65
IGHV3-54-201ENST00000622166 TRIM75PA6NK02 468 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 TMEM232C9JQI7 657 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 POLR2DO15514 142 aaKnown RBP11□□□□□ -0.65
IGHV3-54-201ENST00000622166 ARHGAP6O43182 974 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 ORC4O43929 436 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 DDAH1O94760 285 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 ZSCAN20P17040 1043 aaPredicted RBP11□□□□□ -0.65
IGHV3-54-201ENST00000622166 KRT2P35908 639 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 PLCD1P51178 756 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 AKAP17AQ02040 695 aaKnown RBP11□□□□□ -0.65
IGHV3-54-201ENST00000622166 NR5A1Q13285 461 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 DDB1Q16531 1140 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 CFAP100Q494V2 611 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 TRIM65Q6PJ69 517 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 FBXO33Q7Z6M2 555 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 ANKRD18AQ8IVF6 992 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 MARCH10Q8NA82 808 aaPredicted RBP11□□□□□ -0.65
IGHV3-54-201ENST00000622166 NUP133Q8WUM0 1156 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 TNFRSF25Q93038 417 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 FERMT2Q96AC1 680 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 SHISA4Q96DD7 197 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 ARID3AQ99856 593 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 BSDC1Q9NW68 430 aaPredicted RBP11□□□□□ -0.65
IGHV3-54-201ENST00000622166 RAI14Q9P0K7 980 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11□□□□□ -0.65
IGHV3-54-201ENST00000622166 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11□□□□□ -0.65
IGHV3-54-201ENST00000622166 KIAA1551Q9HCM1 1747 aa11□□□□□ -0.65
IGHV3-54-201ENST00000622166 BAZ2AQ9UIF9 1905 aaKnown RBP10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 GOLGA6L9A6NEM1 432 aa10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 MINDY4BA8MYZ0 360 aa10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 ZSCAN12O43309 604 aa10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 IGSF3O75054 1194 aa10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 FMR1Q06787 632 aaKnown RBP eCLIP10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 SPECC1Q5M775 1068 aa10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 SYT10Q6XYQ8 523 aa10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 CATIPQ7Z7H3 387 aa10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 NUTM2AQ8IVF1 878 aaPredicted RBP10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 ENAHQ8N8S7 591 aaPredicted RBP10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 CCDC34Q96HJ3 373 aa10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 SRRTQ9BXP5 876 aaKnown RBP10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 CSRNP2Q9H175 543 aa10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 CABP5Q9NP86 173 aa10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 PRDM4Q9UKN5 801 aa10.99□□□□□ -0.65
IGHV3-54-201ENST00000622166 MYH13Q9UKX3 1938 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms