RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 CTAGE15A4D2H0 777 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 POLR2DO15514 142 aaKnown RBP17.7■□□□□ 0.42
GPN1-212ENST00000616939 CTAGE8P0CG41 777 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 RCAN1P53805 252 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 RBL2Q08999 1139 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 TTF1Q15361 905 aaPredicted RBP17.7■□□□□ 0.42
GPN1-212ENST00000616939 KIF4BQ2VIQ3 1234 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 FILIP1LQ4L180 1135 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 SLC9C2Q5TAH2 1124 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 CTAGE6Q86UF2 777 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 CTAGE4Q8IX94 777 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 TRMT44Q8IYL2 757 aaKnown RBP17.7■□□□□ 0.42
GPN1-212ENST00000616939 MTA3Q9BTC8 594 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 RSPH14Q9UHP6 348 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 WWC3Q9ULE0 1092 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 SYNRGQ9UMZ2 1314 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 MYH2Q9UKX2 1941 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 NOP2P46087 812 aaKnown RBP17.7■□□□□ 0.42
GPN1-212ENST00000616939 AARSP49588 968 aaKnown RBP eCLIP17.7■□□□□ 0.42
GPN1-212ENST00000616939 GYS2P54840 703 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 TRIM14Q14142 442 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 SCARF1Q14162 830 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 ZNF569Q5MCW4 686 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 SH3RF1Q7Z6J0 888 aa17.7■□□□□ 0.42
GPN1-212ENST00000616939 AATFQ9NY61 560 aaKnown RBP eCLIP17.7■□□□□ 0.42
GPN1-212ENST00000616939 MYH3P11055 1940 aa17.69■□□□□ 0.42
GPN1-212ENST00000616939 MCM3P25205 808 aa17.69■□□□□ 0.42
GPN1-212ENST00000616939 MAGEA9P43362 315 aa17.69■□□□□ 0.42
GPN1-212ENST00000616939 CASP8Q14790 479 aa17.69■□□□□ 0.42
GPN1-212ENST00000616939 MICU3Q86XE3 530 aa17.69■□□□□ 0.42
GPN1-212ENST00000616939 C10orf67Q8IYJ2 551 aa17.69■□□□□ 0.42
GPN1-212ENST00000616939 SLC35F6Q8N357 371 aa17.69■□□□□ 0.42
GPN1-212ENST00000616939 CTCFLQ8NI51 663 aaPredicted RBP17.69■□□□□ 0.42
GPN1-212ENST00000616939 ISCA1Q9BUE6 129 aa17.69■□□□□ 0.42
GPN1-212ENST00000616939 IRX2Q9BZI1 471 aaPredicted RBP17.69■□□□□ 0.42
GPN1-212ENST00000616939 LZTFL1Q9NQ48 299 aa17.69■□□□□ 0.42
GPN1-212ENST00000616939 PUF60Q9UHX1 559 aaKnown RBP17.69■□□□□ 0.42
GPN1-212ENST00000616939 FAN1Q9Y2M0 1017 aa17.69■□□□□ 0.42
GPN1-212ENST00000616939 CYP27B1O15528 508 aa17.68■□□□□ 0.42
GPN1-212ENST00000616939 TEX33O43247 280 aa17.68■□□□□ 0.42
GPN1-212ENST00000616939 AMPD2Q01433 879 aa17.68■□□□□ 0.42
GPN1-212ENST00000616939 MCM6Q14566 821 aa17.68■□□□□ 0.42
GPN1-212ENST00000616939 CCDC57Q2TAC2 916 aa17.68■□□□□ 0.42
GPN1-212ENST00000616939 HSP90B2PQ58FF3 399 aa17.68■□□□□ 0.42
GPN1-212ENST00000616939 TTLL7Q6ZT98 887 aa17.68■□□□□ 0.42
GPN1-212ENST00000616939 DIS3L2Q8IYB7 885 aaKnown RBP17.68■□□□□ 0.42
GPN1-212ENST00000616939 IQSEC3Q9UPP2 1182 aaPredicted RBP17.68■□□□□ 0.42
GPN1-212ENST00000616939 TRIM66O15016 1216 aa17.68■□□□□ 0.42
GPN1-212ENST00000616939 TNNT3P45378 269 aaPredicted RBP17.68■□□□□ 0.42
GPN1-212ENST00000616939 CABP4P57796 275 aa17.68■□□□□ 0.42
GPN1-212ENST00000616939 VSNL1P62760 191 aa17.68■□□□□ 0.42
GPN1-212ENST00000616939 PDE4CQ08493 712 aa17.68■□□□□ 0.42
GPN1-212ENST00000616939 TMEM67Q5HYA8 995 aa17.68■□□□□ 0.42
GPN1-212ENST00000616939 SLC26A6Q9BXS9 759 aa17.68■□□□□ 0.42
GPN1-212ENST00000616939 BCORQ6W2J9 1755 aa17.67■□□□□ 0.42
GPN1-212ENST00000616939 TRIM28Q13263 835 aaKnown RBP17.67■□□□□ 0.42
GPN1-212ENST00000616939 ZNF827Q17R98 1081 aa17.67■□□□□ 0.42
GPN1-212ENST00000616939 HSP90AA4PQ58FG1 418 aa17.67■□□□□ 0.42
GPN1-212ENST00000616939 NFXL1Q6ZNB6 911 aa17.67■□□□□ 0.42
GPN1-212ENST00000616939 NLRP2Q9NX02 1062 aa17.67■□□□□ 0.42
GPN1-212ENST00000616939 LIMA1Q9UHB6 759 aaKnown RBP17.67■□□□□ 0.42
GPN1-212ENST00000616939 BTBD18B2RXH4 712 aa17.66■□□□□ 0.42
GPN1-212ENST00000616939 B4E1Z4 1266 aa17.66■□□□□ 0.42
GPN1-212ENST00000616939 DEXIO95424 95 aa17.66■□□□□ 0.42
GPN1-212ENST00000616939 ARHGAP25P42331 645 aa17.66■□□□□ 0.42
GPN1-212ENST00000616939 GRIN1Q05586 938 aa17.66■□□□□ 0.42
GPN1-212ENST00000616939 SPAG1Q07617 926 aa17.66■□□□□ 0.42
GPN1-212ENST00000616939 TRIM22Q8IYM9 498 aa17.66■□□□□ 0.42
GPN1-212ENST00000616939 GSDMAQ96QA5 445 aa17.66■□□□□ 0.42
GPN1-212ENST00000616939 ZSWIM4Q9H7M6 989 aa17.66■□□□□ 0.42
GPN1-212ENST00000616939 YY1AP1Q9H869 796 aa17.66■□□□□ 0.42
GPN1-212ENST00000616939 CNNM2Q9H8M5 875 aa17.66■□□□□ 0.42
GPN1-212ENST00000616939 SENP2Q9HC62 589 aa17.66■□□□□ 0.42
GPN1-212ENST00000616939 SLC12A7Q9Y666 1083 aa17.66■□□□□ 0.42
GPN1-212ENST00000616939 BMP15O95972 392 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 GYPCP04921 128 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 CSF1RP07333 972 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 CYP26C1Q6V0L0 522 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 KRT28Q7Z3Y7 464 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 STRN4Q9NRL3 753 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 DENND2AQ9ULE3 1009 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 LRP5O75197 1615 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 LRRC10BA6NIK2 292 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 CPP00450 1065 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 RXRAP19793 462 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 MCAMP43121 646 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 CORO7P57737 925 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 MAP9Q49MG5 647 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 HSP90AB3PQ58FF7 597 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 NKX2-3Q8TAU0 364 aa17.65■□□□□ 0.42
GPN1-212ENST00000616939 ANKRD36CQ5JPF3 1778 aa17.64■□□□□ 0.42
GPN1-212ENST00000616939 TARSL2A2RTX5 802 aaKnown RBP17.64■□□□□ 0.41
GPN1-212ENST00000616939 CASP14P31944 242 aa17.64■□□□□ 0.41
GPN1-212ENST00000616939 SPECC1Q5M775 1068 aa17.64■□□□□ 0.41
GPN1-212ENST00000616939 LRRC31Q6UY01 552 aa17.64■□□□□ 0.41
GPN1-212ENST00000616939 ZNF662Q6ZS27 426 aa17.64■□□□□ 0.41
GPN1-212ENST00000616939 RPGRIP1Q96KN7 1286 aa17.64■□□□□ 0.41
GPN1-212ENST00000616939 ORAI2Q96SN7 254 aa17.64■□□□□ 0.41
GPN1-212ENST00000616939 KRT23Q9C075 422 aa17.64■□□□□ 0.41
GPN1-212ENST00000616939 BRMS1Q9HCU9 246 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms