RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 ARMT1Q9H993 441 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 TRIM10Q9UDY6 481 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 MYO1BO43795 1136 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 ZRANB2O95218 330 aaKnown RBP eCLIP13.3□□□□□ -0.28
CDH5-208ENST00000614547 EXOSC10Q01780 885 aaKnown RBP13.3□□□□□ -0.28
CDH5-208ENST00000614547 RAD9BQ6WBX8 426 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 CADPS2Q86UW7 1296 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 ANKRD13CQ8N6S4 541 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 TC2NQ8N9U0 490 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 NOA1Q8NC60 698 aaKnown RBP13.3□□□□□ -0.28
CDH5-208ENST00000614547 BCAS4Q8TDM0 211 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 APPBP2Q92624 585 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 PPLO60437 1756 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 RICTORQ6R327 1708 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 HLTFQ14527 1009 aaKnown RBP eCLIP13.3□□□□□ -0.28
CDH5-208ENST00000614547 CCDC93Q567U6 631 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 CEP57Q86XR8 500 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 LUC7L2Q9Y383 392 aaKnown RBP13.3□□□□□ -0.28
CDH5-208ENST00000614547 NDUFAB1O14561 156 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 ERLIN2O94905 339 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 MBD4O95243 580 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 NLRP5P59047 1200 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 PTPROQ16827 1216 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 USPL1Q5W0Q7 1092 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 MAATS1Q7Z4T9 603 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 NOSTRINQ8IVI9 506 aa13.3□□□□□ -0.28
CDH5-208ENST00000614547 CDR1P51861 262 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 TDRD12Q587J7 1177 aaKnown RBP13.29□□□□□ -0.28
CDH5-208ENST00000614547 APOA5Q6Q788 366 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 MAGEB6Q8N7X4 407 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 GIMAP7Q8NHV1 300 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 SLAIN2Q9P270 581 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 CEP170BQ9Y4F5 1589 aaPredicted RBP13.29□□□□□ -0.28
CDH5-208ENST00000614547 NPHP4O75161 1426 aaPredicted RBP13.29□□□□□ -0.28
CDH5-208ENST00000614547 ATP8B1O43520 1251 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 SCARF1Q14162 830 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 TSGA10IPQ3SY00 556 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 ICE2Q659A1 982 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.29□□□□□ -0.28
CDH5-208ENST00000614547 ADGRG1Q9Y653 693 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 ERBB3P21860 1342 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 GOLGA6BA6NDN3 693 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 RAD21O60216 631 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 AKR1B10O60218 316 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 HPDP32754 393 aaPredicted RBP13.29□□□□□ -0.28
CDH5-208ENST00000614547 GNGT1P63211 74 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 ARID5AQ03989 594 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 KANK3Q6NY19 840 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 IFNL2Q8IZJ0 200 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 OTUD6BQ8N6M0 293 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 WWC3Q9ULE0 1092 aa13.29□□□□□ -0.28
CDH5-208ENST00000614547 SNAP23O00161 211 aa13.28□□□□□ -0.28
CDH5-208ENST00000614547 ZFYP08048 801 aaPredicted RBP13.28□□□□□ -0.28
CDH5-208ENST00000614547 CXCR5P32302 372 aa13.28□□□□□ -0.28
CDH5-208ENST00000614547 KIF6Q6ZMV9 814 aa13.28□□□□□ -0.28
CDH5-208ENST00000614547 FOXP4Q8IVH2 680 aaPredicted RBP13.28□□□□□ -0.28
CDH5-208ENST00000614547 CTAGE1Q96RT6 745 aa13.28□□□□□ -0.28
CDH5-208ENST00000614547 TTF2Q9UNY4 1162 aaKnown RBP13.28□□□□□ -0.28
CDH5-208ENST00000614547 SLC4A4Q9Y6R1 1079 aa13.28□□□□□ -0.28
CDH5-208ENST00000614547 V9GY48 417 aaPredicted RBP13.28□□□□□ -0.28
CDH5-208ENST00000614547 CYP27A1Q02318 531 aa13.28□□□□□ -0.28
CDH5-208ENST00000614547 CCDC47Q96A33 483 aaKnown RBP13.28□□□□□ -0.28
CDH5-208ENST00000614547 COL15A1P39059 1388 aa13.28□□□□□ -0.28
CDH5-208ENST00000614547 INPP5BP32019 993 aa13.28□□□□□ -0.28
CDH5-208ENST00000614547 GUCY1A2P33402 732 aa13.28□□□□□ -0.28
CDH5-208ENST00000614547 SLC7A5Q01650 507 aa13.28□□□□□ -0.28
CDH5-208ENST00000614547 CCDC178Q5BJE1 867 aa13.28□□□□□ -0.28
CDH5-208ENST00000614547 CYB5R4Q7L1T6 521 aa13.28□□□□□ -0.28
CDH5-208ENST00000614547 CAPN7Q9Y6W3 813 aa13.28□□□□□ -0.28
CDH5-208ENST00000614547 ZNF532Q9HCE3 1301 aa13.28□□□□□ -0.28
CDH5-208ENST00000614547 FCHSD1Q86WN1 690 aa13.27□□□□□ -0.28
CDH5-208ENST00000614547 ZHX3Q9H4I2 956 aa13.27□□□□□ -0.28
CDH5-208ENST00000614547 C2orf54Q08AI8 447 aa13.27□□□□□ -0.29
CDH5-208ENST00000614547 CYP26C1Q6V0L0 522 aa13.27□□□□□ -0.29
CDH5-208ENST00000614547 FAM71BQ8TC56 605 aa13.27□□□□□ -0.29
CDH5-208ENST00000614547 SAR1BQ9Y6B6 198 aa13.27□□□□□ -0.29
CDH5-208ENST00000614547 PREX1Q8TCU6 1659 aa13.27□□□□□ -0.29
CDH5-208ENST00000614547 USP8P40818 1118 aa13.27□□□□□ -0.29
CDH5-208ENST00000614547 PAFAH1B1P43034 410 aa13.27□□□□□ -0.29
CDH5-208ENST00000614547 TMTC1Q8IUR5 882 aa13.27□□□□□ -0.29
CDH5-208ENST00000614547 ANKRD18AQ8IVF6 992 aa13.27□□□□□ -0.29
CDH5-208ENST00000614547 OXER1Q8TDS5 423 aa13.27□□□□□ -0.29
CDH5-208ENST00000614547 IL17RAQ96F46 866 aa13.27□□□□□ -0.29
CDH5-208ENST00000614547 MMRN2Q9H8L6 949 aa13.27□□□□□ -0.29
CDH5-208ENST00000614547 BTG4Q9NY30 223 aa13.27□□□□□ -0.29
CDH5-208ENST00000614547 TRMT112Q9UI30 125 aaKnown RBP13.27□□□□□ -0.29
CDH5-208ENST00000614547 FAM205CA6NFA0 338 aa13.26□□□□□ -0.29
CDH5-208ENST00000614547 PLCD1P51178 756 aa13.26□□□□□ -0.29
CDH5-208ENST00000614547 RILPL1Q5EBL4 403 aa13.26□□□□□ -0.29
CDH5-208ENST00000614547 JAKMIP2Q96AA8 810 aa13.26□□□□□ -0.29
CDH5-208ENST00000614547 ALDH8A1Q9H2A2 487 aaPredicted RBP13.26□□□□□ -0.29
CDH5-208ENST00000614547 SLC52A2Q9HAB3 445 aa13.26□□□□□ -0.29
CDH5-208ENST00000614547 MKRN1Q9UHC7 482 aaKnown RBP13.26□□□□□ -0.29
CDH5-208ENST00000614547 CCDC196A0A1B0GTZ2 297 aa13.26□□□□□ -0.29
CDH5-208ENST00000614547 STAT6P42226 847 aa13.26□□□□□ -0.29
CDH5-208ENST00000614547 FXR1P51114 621 aaKnown RBP eCLIP13.26□□□□□ -0.29
CDH5-208ENST00000614547 KIF5AQ12840 1032 aa13.26□□□□□ -0.29
CDH5-208ENST00000614547 MAP3K12Q12852 859 aa13.26□□□□□ -0.29
CDH5-208ENST00000614547 TBC1D10CQ8IV04 446 aa13.26□□□□□ -0.29
CDH5-208ENST00000614547 BPIFA3Q9BQP9 254 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms