RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 PLCG2P16885 1265 aa10.48□□□□□ -0.73
SNCA-212ENST00000611107 USP5P45974 858 aa10.48□□□□□ -0.73
SNCA-212ENST00000611107 HMGCS2P54868 508 aa10.48□□□□□ -0.73
SNCA-212ENST00000611107 TTF1Q15361 905 aaPredicted RBP10.48□□□□□ -0.73
SNCA-212ENST00000611107 CHD1LQ86WJ1 897 aa10.48□□□□□ -0.73
SNCA-212ENST00000611107 CLEC10AQ8IUN9 316 aa10.48□□□□□ -0.73
SNCA-212ENST00000611107 SEC62Q99442 399 aaKnown RBP10.48□□□□□ -0.73
SNCA-212ENST00000611107 ZFYVE28Q9HCC9 887 aa10.48□□□□□ -0.73
SNCA-212ENST00000611107 DCP1AQ9NPI6 582 aaPredicted RBP10.48□□□□□ -0.73
SNCA-212ENST00000611107 PICK1Q9NRD5 415 aa10.48□□□□□ -0.73
SNCA-212ENST00000611107 ZBTB21Q9ULJ3 1066 aa10.48□□□□□ -0.73
SNCA-212ENST00000611107 TTC41PQ6P2S7 1318 aa10.48□□□□□ -0.73
SNCA-212ENST00000611107 RLFQ13129 1914 aa10.48□□□□□ -0.73
SNCA-212ENST00000611107 M0R2C6 588 aa10.47□□□□□ -0.73
SNCA-212ENST00000611107 GH2P01242 217 aa10.47□□□□□ -0.73
SNCA-212ENST00000611107 PDE4AP27815 886 aa10.47□□□□□ -0.73
SNCA-212ENST00000611107 KIAA1755Q5JYT7 1200 aa10.47□□□□□ -0.73
SNCA-212ENST00000611107 OTUD7BQ6GQQ9 843 aa10.47□□□□□ -0.73
SNCA-212ENST00000611107 TATDN1Q6P1N9 297 aa10.47□□□□□ -0.73
SNCA-212ENST00000611107 FBXO46Q6PJ61 603 aaPredicted RBP10.47□□□□□ -0.73
SNCA-212ENST00000611107 FOXP4Q8IVH2 680 aaPredicted RBP10.47□□□□□ -0.73
SNCA-212ENST00000611107 ACER1Q8TDN7 264 aa10.47□□□□□ -0.73
SNCA-212ENST00000611107 GPATCH3Q96I76 525 aa10.47□□□□□ -0.73
SNCA-212ENST00000611107 TRIM47Q96LD4 638 aa10.47□□□□□ -0.73
SNCA-212ENST00000611107 DHX36Q9H2U1 1008 aaKnown RBP10.47□□□□□ -0.73
SNCA-212ENST00000611107 HERC5Q9UII4 1024 aaKnown RBP10.47□□□□□ -0.73
SNCA-212ENST00000611107 PTPN22Q9Y2R2 807 aa10.47□□□□□ -0.73
SNCA-212ENST00000611107 PTCH2Q9Y6C5 1203 aa10.47□□□□□ -0.73
SNCA-212ENST00000611107 USP17L5A8MUK1 530 aa10.46□□□□□ -0.73
SNCA-212ENST00000611107 FOXP2O15409 715 aa10.46□□□□□ -0.73
SNCA-212ENST00000611107 PDE1AP54750 535 aa10.46□□□□□ -0.73
SNCA-212ENST00000611107 LACTBP83111 547 aaPredicted RBP10.46□□□□□ -0.73
SNCA-212ENST00000611107 MTMR2Q13614 643 aa10.46□□□□□ -0.73
SNCA-212ENST00000611107 UBE3CQ15386 1083 aa10.46□□□□□ -0.73
SNCA-212ENST00000611107 SIAH1Q8IUQ4 282 aa10.46□□□□□ -0.73
SNCA-212ENST00000611107 KBTBD3Q8NAB2 608 aa10.46□□□□□ -0.73
SNCA-212ENST00000611107 ZNF280CQ8ND82 737 aa10.46□□□□□ -0.73
SNCA-212ENST00000611107 EPB41L4AQ9HCS5 686 aaPredicted RBP10.46□□□□□ -0.73
SNCA-212ENST00000611107 EMILIN3Q9NT22 766 aa10.46□□□□□ -0.73
SNCA-212ENST00000611107 MCM9Q9NXL9 1143 aa10.46□□□□□ -0.73
SNCA-212ENST00000611107 STAP2Q9UGK3 403 aa10.46□□□□□ -0.73
SNCA-212ENST00000611107 GABRQQ9UN88 632 aa10.46□□□□□ -0.73
SNCA-212ENST00000611107 TACC3Q9Y6A5 838 aa10.46□□□□□ -0.73
SNCA-212ENST00000611107 GREB1LQ9C091 1923 aaPredicted RBP10.46□□□□□ -0.74
SNCA-212ENST00000611107 PDE4DIPQ5VU43 2346 aa10.46□□□□□ -0.74
SNCA-212ENST00000611107 MYH4Q9Y623 1939 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 PARP14Q460N5 1801 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 A0A1W2PRG0 241 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 POTEFA5A3E0 1075 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 GSG1L2A8MUP6 293 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 IGSF3O75054 1194 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 RGS19P49795 217 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 SH3D19Q5HYK7 790 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 CENPQQ7L2Z9 268 aaPredicted RBP10.45□□□□□ -0.74
SNCA-212ENST00000611107 PLEKHM2Q8IWE5 1019 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 CRACR2BQ8N4Y2 399 aaPredicted RBP10.45□□□□□ -0.74
SNCA-212ENST00000611107 ERO1AQ96HE7 468 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 CCDC136Q96JN2 1154 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 STRBPQ96SI9 672 aaKnown RBP10.45□□□□□ -0.74
SNCA-212ENST00000611107 WDR18Q9BV38 432 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 CRNKL1Q9BZJ0 848 aaKnown RBP10.45□□□□□ -0.74
SNCA-212ENST00000611107 EHD4Q9H223 541 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 EFCC1Q9HA90 598 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 TXNRD2Q9NNW7 524 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 ZCCHC17Q9NP64 241 aaKnown RBP10.45□□□□□ -0.74
SNCA-212ENST00000611107 ZBTB47Q9UFB7 747 aaPredicted RBP10.45□□□□□ -0.74
SNCA-212ENST00000611107 SERPINB13Q9UIV8 391 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 AGTPBP1Q9UPW5 1226 aa10.45□□□□□ -0.74
SNCA-212ENST00000611107 MKI67P46013 3256 aaKnown RBP10.45□□□□□ -0.74
SNCA-212ENST00000611107 USP17L12C9JPN9 530 aa10.44□□□□□ -0.74
SNCA-212ENST00000611107 USP17L21D6R901 530 aa10.44□□□□□ -0.74
SNCA-212ENST00000611107 GLRX3O76003 335 aaKnown RBP10.44□□□□□ -0.74
SNCA-212ENST00000611107 HLA-DOAP06340 250 aa10.44□□□□□ -0.74
SNCA-212ENST00000611107 AKR1B1P15121 316 aa10.44□□□□□ -0.74
SNCA-212ENST00000611107 BACE1P56817 501 aa10.44□□□□□ -0.74
SNCA-212ENST00000611107 SEPT2Q15019 361 aa10.44□□□□□ -0.74
SNCA-212ENST00000611107 ZYXQ15942 572 aaKnown RBP10.44□□□□□ -0.74
SNCA-212ENST00000611107 ERICH6BQ5W0A0 696 aa10.44□□□□□ -0.74
SNCA-212ENST00000611107 CTR9Q6PD62 1173 aa10.44□□□□□ -0.74
SNCA-212ENST00000611107 CCDC129Q6ZRS4 1044 aa10.44□□□□□ -0.74
SNCA-212ENST00000611107 SKAP1Q86WV1 359 aa10.44□□□□□ -0.74
SNCA-212ENST00000611107 STK11IPQ8N1F8 1099 aa10.44□□□□□ -0.74
SNCA-212ENST00000611107 SH3TC2Q8TF17 1288 aa10.44□□□□□ -0.74
SNCA-212ENST00000611107 TNRC18O15417 2968 aaPredicted RBP10.44□□□□□ -0.74
SNCA-212ENST00000611107 ERC2O15083 957 aa10.43□□□□□ -0.74
SNCA-212ENST00000611107 RNF113AO15541 343 aaKnown RBP10.43□□□□□ -0.74
SNCA-212ENST00000611107 MYCP01106 439 aaPredicted RBP10.43□□□□□ -0.74
SNCA-212ENST00000611107 POLR3DP05423 398 aaPredicted RBP10.43□□□□□ -0.74
SNCA-212ENST00000611107 OSBPP22059 807 aa10.43□□□□□ -0.74
SNCA-212ENST00000611107 PSMC4P43686 418 aa10.43□□□□□ -0.74
SNCA-212ENST00000611107 Q3C1V9 767 aa10.43□□□□□ -0.74
SNCA-212ENST00000611107 CERKLQ49MI3 558 aaPredicted RBP10.43□□□□□ -0.74
SNCA-212ENST00000611107 C12orf60Q5U649 245 aa10.43□□□□□ -0.74
SNCA-212ENST00000611107 FASTKD5Q7L8L6 764 aaKnown RBP10.43□□□□□ -0.74
SNCA-212ENST00000611107 ANKRD13CQ8N6S4 541 aa10.43□□□□□ -0.74
SNCA-212ENST00000611107 NKX2-3Q8TAU0 364 aa10.43□□□□□ -0.74
SNCA-212ENST00000611107 P2RX7Q99572 595 aaKnown RBP10.43□□□□□ -0.74
SNCA-212ENST00000611107 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.43□□□□□ -0.74
SNCA-212ENST00000611107 ASCC2Q9H1I8 757 aaPredicted RBP10.43□□□□□ -0.74
SNCA-212ENST00000611107 OSBPL3Q9H4L5 887 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms