RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 SBK1Q52WX2 424 aa24.95■■□□□ 1.59
GRAMD1A-212ENST00000600231 DHX40Q8IX18 779 aaKnown RBP24.95■■□□□ 1.59
GRAMD1A-212ENST00000600231 MCM9Q9NXL9 1143 aa24.95■■□□□ 1.59
GRAMD1A-212ENST00000600231 HPSEQ9Y251 543 aa24.95■■□□□ 1.59
GRAMD1A-212ENST00000600231 MYH6P13533 1939 aa24.95■■□□□ 1.59
GRAMD1A-212ENST00000600231 PLEKHA8P1O95397 391 aa24.95■■□□□ 1.58
GRAMD1A-212ENST00000600231 SYKP43405 635 aa24.95■■□□□ 1.58
GRAMD1A-212ENST00000600231 GPSM2P81274 684 aa24.95■■□□□ 1.58
GRAMD1A-212ENST00000600231 OXER1Q8TDS5 423 aa24.95■■□□□ 1.58
GRAMD1A-212ENST00000600231 SHISA4Q96DD7 197 aa24.95■■□□□ 1.58
GRAMD1A-212ENST00000600231 hCG_1642624A0A1W2PR95 340 aa24.94■■□□□ 1.58
GRAMD1A-212ENST00000600231 BECN2A8MW95 431 aa24.94■■□□□ 1.58
GRAMD1A-212ENST00000600231 USP17L8P0C7I0 530 aa24.94■■□□□ 1.58
GRAMD1A-212ENST00000600231 AKAP17AQ02040 695 aaKnown RBP24.94■■□□□ 1.58
GRAMD1A-212ENST00000600231 PKN1Q16512 942 aa24.94■■□□□ 1.58
GRAMD1A-212ENST00000600231 CEP57L1Q8IYX8 460 aa24.94■■□□□ 1.58
GRAMD1A-212ENST00000600231 PIBF1Q8WXW3 757 aa24.94■■□□□ 1.58
GRAMD1A-212ENST00000600231 MAST2Q6P0Q8 1798 aa24.94■■□□□ 1.58
GRAMD1A-212ENST00000600231 DIXDC1Q155Q3 683 aa24.94■■□□□ 1.58
GRAMD1A-212ENST00000600231 ZNF804AQ7Z570 1209 aa24.94■■□□□ 1.58
GRAMD1A-212ENST00000600231 ANO8Q9HCE9 1232 aaPredicted RBP24.93■■□□□ 1.58
GRAMD1A-212ENST00000600231 V9GY48 417 aaPredicted RBP24.93■■□□□ 1.58
GRAMD1A-212ENST00000600231 ST5P78524 1137 aa24.93■■□□□ 1.58
GRAMD1A-212ENST00000600231 DPCR1Q3MIW9 517 aa24.93■■□□□ 1.58
GRAMD1A-212ENST00000600231 RESP18Q5W5W9 173 aa24.93■■□□□ 1.58
GRAMD1A-212ENST00000600231 C17orf53Q8N3J3 647 aaPredicted RBP24.93■■□□□ 1.58
GRAMD1A-212ENST00000600231 VPS54Q9P1Q0 977 aa24.93■■□□□ 1.58
GRAMD1A-212ENST00000600231 MKRN1Q9UHC7 482 aaKnown RBP24.93■■□□□ 1.58
GRAMD1A-212ENST00000600231 TPM3P06753 285 aa24.92■■□□□ 1.58
GRAMD1A-212ENST00000600231 PDE4BQ07343 736 aa24.92■■□□□ 1.58
GRAMD1A-212ENST00000600231 RILPL1Q5EBL4 403 aa24.92■■□□□ 1.58
GRAMD1A-212ENST00000600231 DRC7Q8IY82 874 aa24.92■■□□□ 1.58
GRAMD1A-212ENST00000600231 BAZ2BQ9UIF8 2168 aaKnown RBP24.92■■□□□ 1.58
GRAMD1A-212ENST00000600231 CUTAO60888 179 aa24.92■■□□□ 1.58
GRAMD1A-212ENST00000600231 TRIM37O94972 964 aa24.92■■□□□ 1.58
GRAMD1A-212ENST00000600231 PTGS1P23219 599 aa24.92■■□□□ 1.58
GRAMD1A-212ENST00000600231 SLC27A3Q5K4L6 730 aa24.92■■□□□ 1.58
GRAMD1A-212ENST00000600231 TIGD1Q96MW7 591 aa24.92■■□□□ 1.58
GRAMD1A-212ENST00000600231 RBM28Q9NW13 759 aaKnown RBP24.92■■□□□ 1.58
GRAMD1A-212ENST00000600231 FAM237AA0A1B0GTK4 181 aa24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 BIN1O00499 593 aa24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 PRPF3O43395 683 aaKnown RBP24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 DDAH1O94760 285 aa24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 CALM1P0DP23 149 aa24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 CALM2P0DP24 149 aa24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 CALM3P0DP25 149 aa24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 ZRSR1Q15695 479 aaKnown RBP24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 SARM1Q6SZW1 724 aa24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 C15orf52Q6ZUT6 534 aaKnown RBP24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 SH3RF3Q8TEJ3 882 aaPredicted RBP24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 NAT10Q9H0A0 1025 aaKnown RBP24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 NRBP1Q9UHY1 535 aa24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 UFL1O94874 794 aa24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 NOLC1Q14978 699 aaKnown RBP eCLIP24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 AOPEPQ8N6M6 819 aa24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 KRI1Q8N9T8 703 aaKnown RBP24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 PCDHB6Q9Y5E3 794 aa24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 LAMB1P07942 1786 aa24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 KIAA1551Q9HCM1 1747 aa24.91■■□□□ 1.58
GRAMD1A-212ENST00000600231 TSPY2A6NKD2 308 aa24.9■■□□□ 1.58
GRAMD1A-212ENST00000600231 USP5P45974 858 aa24.9■■□□□ 1.58
GRAMD1A-212ENST00000600231 CCDC186Q7Z3E2 898 aa24.9■■□□□ 1.58
GRAMD1A-212ENST00000600231 DLEC1Q9Y238 1755 aa24.9■■□□□ 1.58
GRAMD1A-212ENST00000600231 C12orf60Q5U649 245 aa24.9■■□□□ 1.58
GRAMD1A-212ENST00000600231 CD209Q9NNX6 404 aa24.9■■□□□ 1.58
GRAMD1A-212ENST00000600231 CABP5Q9NP86 173 aa24.9■■□□□ 1.58
GRAMD1A-212ENST00000600231 R3HCC1Q9Y3T6 440 aaKnown RBP24.9■■□□□ 1.58
GRAMD1A-212ENST00000600231 XBP1P17861 261 aa24.89■■□□□ 1.58
GRAMD1A-212ENST00000600231 RBM6P78332 1123 aaKnown RBP24.89■■□□□ 1.58
GRAMD1A-212ENST00000600231 DDR1Q08345 913 aa24.89■■□□□ 1.58
GRAMD1A-212ENST00000600231 SPECC1Q5M775 1068 aa24.89■■□□□ 1.58
GRAMD1A-212ENST00000600231 TMTC3Q6ZXV5 915 aa24.89■■□□□ 1.58
GRAMD1A-212ENST00000600231 ATP2B1P20020 1258 aa24.89■■□□□ 1.57
GRAMD1A-212ENST00000600231 GRIN1Q05586 938 aa24.89■■□□□ 1.57
GRAMD1A-212ENST00000600231 RBM17Q96I25 401 aaKnown RBP24.89■■□□□ 1.57
GRAMD1A-212ENST00000600231 PYCARDQ9ULZ3 195 aa24.89■■□□□ 1.57
GRAMD1A-212ENST00000600231 PHF20Q9BVI0 1012 aa24.88■■□□□ 1.57
GRAMD1A-212ENST00000600231 CLIP2Q9UDT6 1046 aa24.88■■□□□ 1.57
GRAMD1A-212ENST00000600231 KCNH3Q9ULD8 1083 aa24.88■■□□□ 1.57
GRAMD1A-212ENST00000600231 GSTO1P78417 241 aa24.88■■□□□ 1.57
GRAMD1A-212ENST00000600231 RCSD1Q6JBY9 416 aa24.88■■□□□ 1.57
GRAMD1A-212ENST00000600231 KRT27Q7Z3Y8 459 aa24.88■■□□□ 1.57
GRAMD1A-212ENST00000600231 SRBD1Q8N5C6 995 aaKnown RBP24.88■■□□□ 1.57
GRAMD1A-212ENST00000600231 CTCFLQ8NI51 663 aaPredicted RBP24.88■■□□□ 1.57
GRAMD1A-212ENST00000600231 DYNLL2Q96FJ2 89 aa24.88■■□□□ 1.57
GRAMD1A-212ENST00000600231 GGA1Q9UJY5 639 aa24.88■■□□□ 1.57
GRAMD1A-212ENST00000600231 IGSF3O75054 1194 aa24.87■■□□□ 1.57
GRAMD1A-212ENST00000600231 BAG3O95817 575 aa24.87■■□□□ 1.57
GRAMD1A-212ENST00000600231 ATP2B4P23634 1241 aa24.87■■□□□ 1.57
GRAMD1A-212ENST00000600231 NLRP12P59046 1061 aa24.87■■□□□ 1.57
GRAMD1A-212ENST00000600231 KIAA1524Q8TCG1 905 aa24.87■■□□□ 1.57
GRAMD1A-212ENST00000600231 FBXO2Q9UK22 296 aaPredicted RBP24.87■■□□□ 1.57
GRAMD1A-212ENST00000600231 FAM205CA6NFA0 338 aa24.87■■□□□ 1.57
GRAMD1A-212ENST00000600231 PTPREP23469 700 aa24.87■■□□□ 1.57
GRAMD1A-212ENST00000600231 PPP4CP60510 307 aa24.87■■□□□ 1.57
GRAMD1A-212ENST00000600231 LONRF3Q496Y0 759 aa24.87■■□□□ 1.57
GRAMD1A-212ENST00000600231 ISM2Q6H9L7 571 aa24.87■■□□□ 1.57
GRAMD1A-212ENST00000600231 TGFBRAP1Q8WUH2 860 aa24.87■■□□□ 1.57
GRAMD1A-212ENST00000600231 TFAP4Q01664 338 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms