RNA–Protein interactions for RNA: ENST00000597598.1

SMG9-206, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG9, Length 1,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-206ENST00000597598 SLC5A1P13866 664 aa13.26□□□□□ -0.29
SMG9-206ENST00000597598 DNAJB2P25686 324 aa13.26□□□□□ -0.29
SMG9-206ENST00000597598 BACE1P56817 501 aa13.26□□□□□ -0.29
SMG9-206ENST00000597598 IL16Q14005 1332 aa13.26□□□□□ -0.29
SMG9-206ENST00000597598 CHD9Q3L8U1 2897 aa13.26□□□□□ -0.29
SMG9-206ENST00000597598 SH3RF1Q7Z6J0 888 aa13.26□□□□□ -0.29
SMG9-206ENST00000597598 GTF3C2Q8WUA4 911 aaPredicted RBP13.26□□□□□ -0.29
SMG9-206ENST00000597598 EDC3Q96F86 508 aaKnown RBP13.26□□□□□ -0.29
SMG9-206ENST00000597598 RNPC3Q96LT9 517 aaKnown RBP13.26□□□□□ -0.29
SMG9-206ENST00000597598 BICC1Q9H694 974 aaKnown RBP13.26□□□□□ -0.29
SMG9-206ENST00000597598 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMG9-206ENST00000597598 MYH13Q9UKX3 1938 aa13.26□□□□□ -0.29
SMG9-206ENST00000597598 ITGB8P26012 769 aa13.25□□□□□ -0.29
SMG9-206ENST00000597598 EPHB4P54760 987 aa13.25□□□□□ -0.29
SMG9-206ENST00000597598 TRIM60Q495X7 471 aa13.25□□□□□ -0.29
SMG9-206ENST00000597598 WWC1Q8IX03 1113 aa13.25□□□□□ -0.29
SMG9-206ENST00000597598 ARRDC4Q8NCT1 418 aa13.25□□□□□ -0.29
SMG9-206ENST00000597598 SRCIN1Q9C0H9 1055 aa13.25□□□□□ -0.29
SMG9-206ENST00000597598 AS3MTQ9HBK9 375 aa13.25□□□□□ -0.29
SMG9-206ENST00000597598 PRDM5Q9NQX1 630 aaPredicted RBP13.25□□□□□ -0.29
SMG9-206ENST00000597598 MYH2Q9UKX2 1941 aa13.24□□□□□ -0.29
SMG9-206ENST00000597598 FAM196BA6NMK8 535 aa13.24□□□□□ -0.29
SMG9-206ENST00000597598 SEMA3EO15041 775 aa13.24□□□□□ -0.29
SMG9-206ENST00000597598 RHBDL3P58872 404 aa13.24□□□□□ -0.29
SMG9-206ENST00000597598 MTMR2Q13614 643 aa13.24□□□□□ -0.29
SMG9-206ENST00000597598 GJC2Q5T442 439 aaPredicted RBP13.24□□□□□ -0.29
SMG9-206ENST00000597598 TRPV1Q8NER1 839 aa13.24□□□□□ -0.29
SMG9-206ENST00000597598 KLHDC4Q8TBB5 520 aa13.24□□□□□ -0.29
SMG9-206ENST00000597598 DENND2AQ9ULE3 1009 aa13.24□□□□□ -0.29
SMG9-206ENST00000597598 XIRP2A4UGR9 3374 aa13.24□□□□□ -0.29
SMG9-206ENST00000597598 MYO9BQ13459 2157 aa13.23□□□□□ -0.29
SMG9-206ENST00000597598 C19orf81C9J6K1 198 aa13.23□□□□□ -0.29
SMG9-206ENST00000597598 CYBAP13498 195 aa13.23□□□□□ -0.29
SMG9-206ENST00000597598 PICALMQ13492 652 aa13.23□□□□□ -0.29
SMG9-206ENST00000597598 CCAR1Q8IX12 1150 aaKnown RBP13.23□□□□□ -0.29
SMG9-206ENST00000597598 SLF2Q8IX21 1173 aa13.23□□□□□ -0.29
SMG9-206ENST00000597598 ZGPATQ8N5A5 531 aaKnown RBP13.23□□□□□ -0.29
SMG9-206ENST00000597598 TIFAQ96CG3 184 aa13.23□□□□□ -0.29
SMG9-206ENST00000597598 GAS2L1Q99501 681 aaPredicted RBP13.23□□□□□ -0.29
SMG9-206ENST00000597598 LRFN3Q9BTN0 628 aa13.23□□□□□ -0.29
SMG9-206ENST00000597598 GNL3LQ9NVN8 582 aaKnown RBP13.23□□□□□ -0.29
SMG9-206ENST00000597598 TMOD4Q9NZQ9 345 aa13.23□□□□□ -0.29
SMG9-206ENST00000597598 HCN4Q9Y3Q4 1203 aa13.23□□□□□ -0.29
SMG9-206ENST00000597598 TACC3Q9Y6A5 838 aa13.23□□□□□ -0.29
SMG9-206ENST00000597598 MUC6Q6W4X9 2439 aa13.22□□□□□ -0.29
SMG9-206ENST00000597598 GPR75-ASB3A0A0A6YYF3 556 aa13.22□□□□□ -0.29
SMG9-206ENST00000597598 SLC15A5A6NIM6 579 aa13.22□□□□□ -0.29
SMG9-206ENST00000597598 EYA2O00167 538 aa13.22□□□□□ -0.29
SMG9-206ENST00000597598 KIAA0355O15063 1070 aa13.22□□□□□ -0.29
SMG9-206ENST00000597598 MAP4K4O95819 1239 aaPredicted RBP13.22□□□□□ -0.29
SMG9-206ENST00000597598 PTPREP23469 700 aa13.22□□□□□ -0.29
SMG9-206ENST00000597598 CNGA1P29973 690 aa13.22□□□□□ -0.29
SMG9-206ENST00000597598 BTDP43251 543 aa13.22□□□□□ -0.29
SMG9-206ENST00000597598 HERC5Q9UII4 1024 aaKnown RBP13.22□□□□□ -0.29
SMG9-206ENST00000597598 RABGAP1Q9Y3P9 1069 aa13.22□□□□□ -0.29
SMG9-206ENST00000597598 ATAD5Q96QE3 1844 aa13.22□□□□□ -0.29
SMG9-206ENST00000597598 FANCIQ9NVI1 1328 aa13.21□□□□□ -0.29
SMG9-206ENST00000597598 KBTBD13C9JR72 458 aa13.21□□□□□ -0.29
SMG9-206ENST00000597598 CNMDO75829 334 aa13.21□□□□□ -0.29
SMG9-206ENST00000597598 GLRX3O76003 335 aaKnown RBP13.21□□□□□ -0.29
SMG9-206ENST00000597598 BMP1P13497 986 aa13.21□□□□□ -0.29
SMG9-206ENST00000597598 CYP2C19P33261 490 aa13.21□□□□□ -0.29
SMG9-206ENST00000597598 RFX5P48382 616 aaPredicted RBP13.21□□□□□ -0.29
SMG9-206ENST00000597598 ATP2B2Q01814 1243 aa13.21□□□□□ -0.29
SMG9-206ENST00000597598 TLE2Q04725 743 aa13.21□□□□□ -0.29
SMG9-206ENST00000597598 GRB14Q14449 540 aa13.21□□□□□ -0.29
SMG9-206ENST00000597598 ATG9AQ7Z3C6 839 aa13.21□□□□□ -0.29
SMG9-206ENST00000597598 NPLOC4Q8TAT6 608 aa13.21□□□□□ -0.29
SMG9-206ENST00000597598 PPM1EQ8WY54 764 aa13.21□□□□□ -0.29
SMG9-206ENST00000597598 CHD7Q9P2D1 2997 aa13.2□□□□□ -0.3
SMG9-206ENST00000597598 MROH7-TTC4A0A0A0MT08 1334 aa13.2□□□□□ -0.3
SMG9-206ENST00000597598 PDS5AQ29RF7 1337 aaKnown RBP13.2□□□□□ -0.3
SMG9-206ENST00000597598 USP17L10C9JJH3 530 aa13.2□□□□□ -0.3
SMG9-206ENST00000597598 ASNSP08243 561 aa13.2□□□□□ -0.3
SMG9-206ENST00000597598 PHKA1P46020 1223 aa13.2□□□□□ -0.3
SMG9-206ENST00000597598 CCNA1P78396 465 aa13.2□□□□□ -0.3
SMG9-206ENST00000597598 ADGRE1Q14246 886 aa13.2□□□□□ -0.3
SMG9-206ENST00000597598 NCBP3Q53F19 620 aaKnown RBP13.2□□□□□ -0.3
SMG9-206ENST00000597598 SLC4A10Q6U841 1118 aa13.2□□□□□ -0.3
SMG9-206ENST00000597598 DZIP1Q86YF9 867 aaKnown RBP13.2□□□□□ -0.3
SMG9-206ENST00000597598 PAGR1Q9BTK6 254 aa13.2□□□□□ -0.3
SMG9-206ENST00000597598 CXXC1Q9P0U4 656 aaPredicted RBP13.2□□□□□ -0.3
SMG9-206ENST00000597598 REV3LO60673 3130 aa13.19□□□□□ -0.3
SMG9-206ENST00000597598 SEPT4O43236 478 aa13.19□□□□□ -0.3
SMG9-206ENST00000597598 CLTBP09497 229 aa13.19□□□□□ -0.3
SMG9-206ENST00000597598 ADCYAP1R1P41586 468 aa13.19□□□□□ -0.3
SMG9-206ENST00000597598 JAG1P78504 1218 aa13.19□□□□□ -0.3
SMG9-206ENST00000597598 FPGSQ05932 587 aa13.19□□□□□ -0.3
SMG9-206ENST00000597598 IL27Q8NEV9 243 aa13.19□□□□□ -0.3
SMG9-206ENST00000597598 ZNF384Q8TF68 577 aa13.19□□□□□ -0.3
SMG9-206ENST00000597598 NECAB3Q96P71 396 aaPredicted RBP13.19□□□□□ -0.3
SMG9-206ENST00000597598 PRDM12Q9H4Q4 367 aa13.19□□□□□ -0.3
SMG9-206ENST00000597598 GINM1Q9NU53 330 aa13.19□□□□□ -0.3
SMG9-206ENST00000597598 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
SMG9-206ENST00000597598 LRRC41Q15345 812 aa13.18□□□□□ -0.3
SMG9-206ENST00000597598 RASIP1Q5U651 963 aa13.18□□□□□ -0.3
SMG9-206ENST00000597598 OLFML2BQ68BL8 750 aa13.18□□□□□ -0.3
SMG9-206ENST00000597598 LBX2Q6XYB7 198 aa13.18□□□□□ -0.3
SMG9-206ENST00000597598 METTL16Q86W50 562 aaKnown RBP13.18□□□□□ -0.3
SMG9-206ENST00000597598 PBX4Q9BYU1 374 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms