RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 FAM110CQ1W6H9 321 aa21.82■■□□□ 1.08
CIRBP-243ENST00000593128 CLASRPQ8N2M8 674 aaKnown RBP21.82■■□□□ 1.08
CIRBP-243ENST00000593128 NKX2-3Q8TAU0 364 aa21.82■■□□□ 1.08
CIRBP-243ENST00000593128 SHISA4Q96DD7 197 aa21.82■■□□□ 1.08
CIRBP-243ENST00000593128 DNAJC2Q99543 621 aaKnown RBP21.82■■□□□ 1.08
CIRBP-243ENST00000593128 ZBTB21Q9ULJ3 1066 aa21.82■■□□□ 1.08
CIRBP-243ENST00000593128 HMMRO75330 724 aa21.81■■□□□ 1.08
CIRBP-243ENST00000593128 IFIT2P09913 472 aaKnown RBP21.81■■□□□ 1.08
CIRBP-243ENST00000593128 GCLCP48506 637 aaPredicted RBP21.81■■□□□ 1.08
CIRBP-243ENST00000593128 BACE1P56817 501 aa21.81■■□□□ 1.08
CIRBP-243ENST00000593128 DPF3Q92784 378 aa21.81■■□□□ 1.08
CIRBP-243ENST00000593128 WDR18Q9BV38 432 aa21.81■■□□□ 1.08
CIRBP-243ENST00000593128 DDX19BQ9UMR2 479 aa21.81■■□□□ 1.08
CIRBP-243ENST00000593128 IGSF3O75054 1194 aa21.8■■□□□ 1.08
CIRBP-243ENST00000593128 GJB1P08034 283 aa21.8■■□□□ 1.08
CIRBP-243ENST00000593128 GJA8P48165 433 aa21.8■■□□□ 1.08
CIRBP-243ENST00000593128 ZYXQ15942 572 aaKnown RBP21.8■■□□□ 1.08
CIRBP-243ENST00000593128 SH3D19Q5HYK7 790 aa21.8■■□□□ 1.08
CIRBP-243ENST00000593128 DOCK3Q8IZD9 2030 aa21.79■■□□□ 1.08
CIRBP-243ENST00000593128 MAGEB6P1A0A0J9YX57 407 aa21.79■■□□□ 1.08
CIRBP-243ENST00000593128 USP17L10C9JJH3 530 aa21.79■■□□□ 1.08
CIRBP-243ENST00000593128 GOLIM4O00461 696 aa21.79■■□□□ 1.08
CIRBP-243ENST00000593128 GH2P01242 217 aa21.79■■□□□ 1.08
CIRBP-243ENST00000593128 CERS3Q8IU89 383 aa21.79■■□□□ 1.08
CIRBP-243ENST00000593128 KIF1BPQ96EK5 621 aa21.79■■□□□ 1.08
CIRBP-243ENST00000593128 FEZ1Q99689 392 aa21.79■■□□□ 1.08
CIRBP-243ENST00000593128 NAV1Q8NEY1 1877 aa21.78■■□□□ 1.08
CIRBP-243ENST00000593128 PEX10O60683 326 aa21.78■■□□□ 1.08
CIRBP-243ENST00000593128 RAB3GAP1Q15042 981 aa21.78■■□□□ 1.08
CIRBP-243ENST00000593128 TTF1Q15361 905 aaPredicted RBP21.78■■□□□ 1.08
CIRBP-243ENST00000593128 SLC9C2Q5TAH2 1124 aa21.78■■□□□ 1.08
CIRBP-243ENST00000593128 METTL16Q86W50 562 aaKnown RBP21.78■■□□□ 1.08
CIRBP-243ENST00000593128 RPAP2Q8IXW5 612 aaPredicted RBP21.78■■□□□ 1.08
CIRBP-243ENST00000593128 U2AF1L4Q8WU68 220 aaKnown RBP21.78■■□□□ 1.08
CIRBP-243ENST00000593128 RCAN3Q9UKA8 241 aa21.78■■□□□ 1.08
CIRBP-243ENST00000593128 C19orf81C9J6K1 198 aa21.77■■□□□ 1.08
CIRBP-243ENST00000593128 TFRCP02786 760 aaKnown RBP21.77■■□□□ 1.08
CIRBP-243ENST00000593128 POLR3DP05423 398 aaPredicted RBP21.77■■□□□ 1.08
CIRBP-243ENST00000593128 IRF5Q13568 498 aa21.77■■□□□ 1.08
CIRBP-243ENST00000593128 HABP4Q5JVS0 413 aaKnown RBP21.77■■□□□ 1.08
CIRBP-243ENST00000593128 PXYLP1Q8TE99 480 aa21.77■■□□□ 1.08
CIRBP-243ENST00000593128 P2RX7Q99572 595 aaKnown RBP21.77■■□□□ 1.08
CIRBP-243ENST00000593128 SERPINB13Q9UIV8 391 aa21.77■■□□□ 1.08
CIRBP-243ENST00000593128 H0YGN5 161 aa21.76■■□□□ 1.07
CIRBP-243ENST00000593128 PDE6AP16499 860 aa21.76■■□□□ 1.07
CIRBP-243ENST00000593128 TTC6Q86TZ1 520 aa21.76■■□□□ 1.07
CIRBP-243ENST00000593128 CCAR1Q8IX12 1150 aaKnown RBP21.76■■□□□ 1.07
CIRBP-243ENST00000593128 SIRT2Q8IXJ6 389 aa21.76■■□□□ 1.07
CIRBP-243ENST00000593128 DEFB118Q96PH6 123 aa21.76■■□□□ 1.07
CIRBP-243ENST00000593128 PAGR1Q9BTK6 254 aa21.76■■□□□ 1.07
CIRBP-243ENST00000593128 GINM1Q9NU53 330 aa21.76■■□□□ 1.07
CIRBP-243ENST00000593128 ZBTB40Q9NUA8 1239 aa21.76■■□□□ 1.07
CIRBP-243ENST00000593128 FARP2O94887 1054 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-243ENST00000593128 HERVK_113P62684 666 aa21.75■■□□□ 1.07
CIRBP-243ENST00000593128 CERKLQ49MI3 558 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-243ENST00000593128 USP17L2Q6R6M4 530 aa21.75■■□□□ 1.07
CIRBP-243ENST00000593128 EDC3Q96F86 508 aaKnown RBP21.75■■□□□ 1.07
CIRBP-243ENST00000593128 ZNF532Q9HCE3 1301 aa21.75■■□□□ 1.07
CIRBP-243ENST00000593128 SGPL1O95470 568 aa21.74■■□□□ 1.07
CIRBP-243ENST00000593128 ABCB5Q2M3G0 1257 aa21.74■■□□□ 1.07
CIRBP-243ENST00000593128 GPRC5AQ8NFJ5 357 aa21.74■■□□□ 1.07
CIRBP-243ENST00000593128 RIOK1Q9BRS2 568 aaKnown RBP21.74■■□□□ 1.07
CIRBP-243ENST00000593128 CRNKL1Q9BZJ0 848 aaKnown RBP21.74■■□□□ 1.07
CIRBP-243ENST00000593128 CHMP4BQ9H444 224 aaKnown RBP21.74■■□□□ 1.07
CIRBP-243ENST00000593128 CWC22Q9HCG8 908 aaKnown RBP21.74■■□□□ 1.07
CIRBP-243ENST00000593128 RAB11FIP3O75154 756 aa21.73■■□□□ 1.07
CIRBP-243ENST00000593128 HOXA7P31268 230 aaPredicted RBP21.73■■□□□ 1.07
CIRBP-243ENST00000593128 PLCD1P51178 756 aa21.73■■□□□ 1.07
CIRBP-243ENST00000593128 HTATIP2Q9BUP3 242 aa21.73■■□□□ 1.07
CIRBP-243ENST00000593128 BOLA2Q9H3K6 86 aa21.73■■□□□ 1.07
CIRBP-243ENST00000593128 TXNRD2Q9NNW7 524 aa21.73■■□□□ 1.07
CIRBP-243ENST00000593128 CABP5Q9NP86 173 aa21.73■■□□□ 1.07
CIRBP-243ENST00000593128 EMILIN3Q9NT22 766 aa21.73■■□□□ 1.07
CIRBP-243ENST00000593128 MCM9Q9NXL9 1143 aa21.73■■□□□ 1.07
CIRBP-243ENST00000593128 MORF4L1Q9UBU8 362 aa21.73■■□□□ 1.07
CIRBP-243ENST00000593128 COLQQ9Y215 455 aaPredicted RBP21.73■■□□□ 1.07
CIRBP-243ENST00000593128 MPHOSPH10O00566 681 aaKnown RBP21.72■■□□□ 1.07
CIRBP-243ENST00000593128 CYP2B6P20813 491 aa21.72■■□□□ 1.07
CIRBP-243ENST00000593128 TATDN1Q6P1N9 297 aa21.72■■□□□ 1.07
CIRBP-243ENST00000593128 TMED8Q6PL24 325 aaPredicted RBP21.72■■□□□ 1.07
CIRBP-243ENST00000593128 SDR42E1Q8WUS8 393 aa21.72■■□□□ 1.07
CIRBP-243ENST00000593128 EHD4Q9H223 541 aa21.72■■□□□ 1.07
CIRBP-243ENST00000593128 TRIM32Q13049 653 aa21.71■■□□□ 1.07
CIRBP-243ENST00000593128 C20orf194Q5TEA3 1177 aa21.71■■□□□ 1.07
CIRBP-243ENST00000593128 LCORLQ8N3X6 602 aa21.71■■□□□ 1.07
CIRBP-243ENST00000593128 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.71■■□□□ 1.074e-7■■■■□ 22.1
CIRBP-243ENST00000593128 ARMT1Q9H993 441 aa21.71■■□□□ 1.07
CIRBP-243ENST00000593128 PAG1Q9NWQ8 432 aa21.71■■□□□ 1.07
CIRBP-243ENST00000593128 DDX60LQ5H9U9 1706 aaKnown RBP21.71■■□□□ 1.07
CIRBP-243ENST00000593128 PLXNB2O15031 1838 aa21.71■■□□□ 1.07
CIRBP-243ENST00000593128 HMGCRP04035 888 aa21.7■■□□□ 1.06
CIRBP-243ENST00000593128 SHMT1P34896 483 aa21.7■■□□□ 1.06
CIRBP-243ENST00000593128 EVX2Q03828 476 aa21.7■■□□□ 1.06
CIRBP-243ENST00000593128 PDE3AQ14432 1141 aa21.7■■□□□ 1.06
CIRBP-243ENST00000593128 SLFNL1Q499Z3 407 aa21.7■■□□□ 1.06
CIRBP-243ENST00000593128 WDR78Q5VTH9 848 aa21.7■■□□□ 1.06
CIRBP-243ENST00000593128 ACER1Q8TDN7 264 aa21.7■■□□□ 1.06
CIRBP-243ENST00000593128 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.7■■□□□ 1.06
CIRBP-243ENST00000593128 RBPJLQ9UBG7 517 aa21.7■■□□□ 1.06
CIRBP-243ENST00000593128 GJD2Q9UKL4 321 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms