RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SNAPC2Q13487 334 aa13.85□□□□□ -0.19
VMP1-211ENST00000591315 CTR9Q6PD62 1173 aa13.85□□□□□ -0.19
VMP1-211ENST00000591315 TTC6Q86TZ1 520 aa13.85□□□□□ -0.19
VMP1-211ENST00000591315 STK11IPQ8N1F8 1099 aa13.85□□□□□ -0.19
VMP1-211ENST00000591315 PRDM10Q9NQV6 1147 aa13.85□□□□□ -0.19
VMP1-211ENST00000591315 ATP8A2Q9NTI2 1148 aa13.85□□□□□ -0.19
VMP1-211ENST00000591315 SAGE1Q9NXZ1 904 aa13.85□□□□□ -0.19
VMP1-211ENST00000591315 GH2P01242 217 aa13.84□□□□□ -0.19
VMP1-211ENST00000591315 CETPP11597 493 aa13.84□□□□□ -0.19
VMP1-211ENST00000591315 GSPT1P15170 499 aaKnown RBP13.84□□□□□ -0.19
VMP1-211ENST00000591315 INHBEP58166 350 aa13.84□□□□□ -0.19
VMP1-211ENST00000591315 SPP2Q13103 211 aa13.84□□□□□ -0.19
VMP1-211ENST00000591315 NMIQ13287 307 aaPredicted RBP13.84□□□□□ -0.19
VMP1-211ENST00000591315 CRHR2Q13324 411 aa13.84□□□□□ -0.19
VMP1-211ENST00000591315 C12orf60Q5U649 245 aa13.84□□□□□ -0.19
VMP1-211ENST00000591315 VPS53Q5VIR6 699 aa13.84□□□□□ -0.19
VMP1-211ENST00000591315 GPAT2Q6NUI2 795 aa13.84□□□□□ -0.19
VMP1-211ENST00000591315 TATDN1Q6P1N9 297 aa13.84□□□□□ -0.19
VMP1-211ENST00000591315 TRIM34Q9BYJ4 488 aa13.84□□□□□ -0.19
VMP1-211ENST00000591315 EHD4Q9H223 541 aa13.84□□□□□ -0.19
VMP1-211ENST00000591315 ZBTB21Q9ULJ3 1066 aa13.84□□□□□ -0.19
VMP1-211ENST00000591315 GUCY1A2P33402 732 aa13.83□□□□□ -0.2
VMP1-211ENST00000591315 CAP1Q01518 475 aa13.83□□□□□ -0.2
VMP1-211ENST00000591315 A0A0G2JLL6 359 aaPredicted RBP13.82□□□□□ -0.2
VMP1-211ENST00000591315 USP17L5A8MUK1 530 aa13.82□□□□□ -0.2
VMP1-211ENST00000591315 MINDY4BA8MYZ0 360 aa13.82□□□□□ -0.2
VMP1-211ENST00000591315 GPR25O00155 361 aa13.82□□□□□ -0.2
VMP1-211ENST00000591315 CXCL11O14625 94 aa13.82□□□□□ -0.2
VMP1-211ENST00000591315 APPP05067 770 aa13.82□□□□□ -0.2
VMP1-211ENST00000591315 CERKLQ49MI3 558 aaPredicted RBP13.82□□□□□ -0.2
VMP1-211ENST00000591315 TTC22Q5TAA0 569 aa13.82□□□□□ -0.2
VMP1-211ENST00000591315 GADL1Q6ZQY3 521 aa13.82□□□□□ -0.2
VMP1-211ENST00000591315 PRRT2Q7Z6L0 340 aaPredicted RBP13.82□□□□□ -0.2
VMP1-211ENST00000591315 ZNF589Q86UQ0 364 aaPredicted RBP13.82□□□□□ -0.2
VMP1-211ENST00000591315 CLEC10AQ8IUN9 316 aa13.82□□□□□ -0.2
VMP1-211ENST00000591315 ZNF296Q8WUU4 475 aaPredicted RBP13.82□□□□□ -0.2
VMP1-211ENST00000591315 PATL2C9JE40 543 aaKnown RBP13.81□□□□□ -0.2
VMP1-211ENST00000591315 ASNSP08243 561 aa13.81□□□□□ -0.2
VMP1-211ENST00000591315 AKR1B1P15121 316 aa13.81□□□□□ -0.2
VMP1-211ENST00000591315 SDSP20132 328 aa13.81□□□□□ -0.2
VMP1-211ENST00000591315 CDK8P49336 464 aa13.81□□□□□ -0.2
VMP1-211ENST00000591315 HMGCS2P54868 508 aa13.81□□□□□ -0.2
VMP1-211ENST00000591315 SEPT2Q15019 361 aa13.81□□□□□ -0.2
VMP1-211ENST00000591315 TAF1CQ15572 869 aaPredicted RBP13.81□□□□□ -0.2
VMP1-211ENST00000591315 ABCB5Q2M3G0 1257 aa13.81□□□□□ -0.2
VMP1-211ENST00000591315 LRRFIP1Q32MZ4 808 aaKnown RBP13.81□□□□□ -0.2
VMP1-211ENST00000591315 TREML2Q5T2D2 321 aa13.81□□□□□ -0.2
VMP1-211ENST00000591315 IFNL3Q8IZI9 196 aa13.81□□□□□ -0.2
VMP1-211ENST00000591315 ZNF280CQ8ND82 737 aa13.81□□□□□ -0.2
VMP1-211ENST00000591315 ACER1Q8TDN7 264 aa13.81□□□□□ -0.2
VMP1-211ENST00000591315 MYH8P13535 1937 aa13.81□□□□□ -0.2
VMP1-211ENST00000591315 PDHXO00330 501 aa13.8□□□□□ -0.2
VMP1-211ENST00000591315 ECM2O94769 699 aaPredicted RBP13.8□□□□□ -0.2
VMP1-211ENST00000591315 ALDH1A1P00352 501 aa13.8□□□□□ -0.2
VMP1-211ENST00000591315 CYP2C8P10632 490 aa13.8□□□□□ -0.2
VMP1-211ENST00000591315 TDO2P48775 406 aa13.8□□□□□ -0.2
VMP1-211ENST00000591315 MTMR2Q13614 643 aa13.8□□□□□ -0.2
VMP1-211ENST00000591315 RAB3GAP1Q15042 981 aa13.8□□□□□ -0.2
VMP1-211ENST00000591315 SBK1Q52WX2 424 aa13.8□□□□□ -0.2
VMP1-211ENST00000591315 OTUD7BQ6GQQ9 843 aa13.8□□□□□ -0.2
VMP1-211ENST00000591315 C16orf86Q6ZW13 317 aa13.8□□□□□ -0.2
VMP1-211ENST00000591315 WDR18Q9BV38 432 aa13.8□□□□□ -0.2
VMP1-211ENST00000591315 CFHR5Q9BXR6 569 aa13.8□□□□□ -0.2
VMP1-211ENST00000591315 IL25Q9H293 177 aa13.8□□□□□ -0.2
VMP1-211ENST00000591315 INCENPQ9NQS7 918 aa13.8□□□□□ -0.2
VMP1-211ENST00000591315 HELLSQ9NRZ9 838 aa13.8□□□□□ -0.2
VMP1-211ENST00000591315 TACC3Q9Y6A5 838 aa13.8□□□□□ -0.2
VMP1-211ENST00000591315 ZSWIM8A7E2V4 1837 aa13.79□□□□□ -0.2
VMP1-211ENST00000591315 MPHOSPH10O00566 681 aaKnown RBP13.79□□□□□ -0.2
VMP1-211ENST00000591315 MCMDC2Q4G0Z9 681 aa13.79□□□□□ -0.2
VMP1-211ENST00000591315 CWC27Q6UX04 472 aaKnown RBP13.79□□□□□ -0.2
VMP1-211ENST00000591315 ANKRD23Q86SG2 305 aa13.79□□□□□ -0.2
VMP1-211ENST00000591315 DDRGK1Q96HY6 314 aa13.79□□□□□ -0.2
VMP1-211ENST00000591315 HTTP42858 3142 aa13.79□□□□□ -0.2
VMP1-211ENST00000591315 A0A1W2PRG0 241 aa13.78□□□□□ -0.2
VMP1-211ENST00000591315 PRDM1O75626 825 aa13.78□□□□□ -0.2
VMP1-211ENST00000591315 GNAT2P19087 354 aa13.78□□□□□ -0.2
VMP1-211ENST00000591315 ZYXQ15942 572 aaKnown RBP13.78□□□□□ -0.2
VMP1-211ENST00000591315 GIMAP6Q6P9H5 292 aa13.78□□□□□ -0.2
VMP1-211ENST00000591315 CENPQQ7L2Z9 268 aaPredicted RBP13.78□□□□□ -0.2
VMP1-211ENST00000591315 SIAH1Q8IUQ4 282 aa13.78□□□□□ -0.2
VMP1-211ENST00000591315 TNS4Q8IZW8 715 aa13.78□□□□□ -0.2
VMP1-211ENST00000591315 CCDC136Q96JN2 1154 aa13.78□□□□□ -0.2
VMP1-211ENST00000591315 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.78□□□□□ -0.2
VMP1-211ENST00000591315 ZFYVE28Q9HCC9 887 aa13.78□□□□□ -0.2
VMP1-211ENST00000591315 EMILIN3Q9NT22 766 aa13.78□□□□□ -0.2
VMP1-211ENST00000591315 ARPP21Q9UBL0 812 aaPredicted RBP13.78□□□□□ -0.2
VMP1-211ENST00000591315 CPA4Q9UI42 421 aa13.78□□□□□ -0.2
VMP1-211ENST00000591315 LOC285556D6RIA3 1793 aa13.77□□□□□ -0.21
VMP1-211ENST00000591315 PEX10O60683 326 aa13.77□□□□□ -0.21
VMP1-211ENST00000591315 FKTNO75072 461 aa13.77□□□□□ -0.21
VMP1-211ENST00000591315 NEFLP07196 543 aa13.77□□□□□ -0.21
VMP1-211ENST00000591315 CENPBP07199 599 aaPredicted RBP13.77□□□□□ -0.21
VMP1-211ENST00000591315 RASA1P20936 1047 aa13.77□□□□□ -0.21
VMP1-211ENST00000591315 BACE1P56817 501 aa13.77□□□□□ -0.21
VMP1-211ENST00000591315 CTDSPL2Q05D32 466 aa13.77□□□□□ -0.21
VMP1-211ENST00000591315 KIAA1755Q5JYT7 1200 aa13.77□□□□□ -0.21
VMP1-211ENST00000591315 FASTKD5Q7L8L6 764 aaKnown RBP13.77□□□□□ -0.21
VMP1-211ENST00000591315 AMOTL1Q8IY63 956 aa13.77□□□□□ -0.21
VMP1-211ENST00000591315 CD99L2Q8TCZ2 262 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms