RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 ZBTB21Q9ULJ3 1066 aa21.98■■□□□ 1.11
DDX39A-212ENST00000590260 SPP2Q13103 211 aa21.97■■□□□ 1.11
DDX39A-212ENST00000590260 CTU1Q7Z7A3 348 aaKnown RBP21.97■■□□□ 1.11
DDX39A-212ENST00000590260 CHD1LQ86WJ1 897 aa21.97■■□□□ 1.11
DDX39A-212ENST00000590260 DYNLL2Q96FJ2 89 aa21.97■■□□□ 1.11
DDX39A-212ENST00000590260 USP17L5A8MUK1 530 aa21.96■■□□□ 1.11
DDX39A-212ENST00000590260 GSG1L2A8MUP6 293 aa21.96■■□□□ 1.11
DDX39A-212ENST00000590260 TLR2O60603 784 aa21.96■■□□□ 1.11
DDX39A-212ENST00000590260 GUCY1A2P33402 732 aa21.96■■□□□ 1.11
DDX39A-212ENST00000590260 TREML2Q5T2D2 321 aa21.96■■□□□ 1.11
DDX39A-212ENST00000590260 PLEKHM2Q8IWE5 1019 aa21.96■■□□□ 1.11
DDX39A-212ENST00000590260 SLC44A5Q8NCS7 719 aa21.96■■□□□ 1.11
DDX39A-212ENST00000590260 ZNF280CQ8ND82 737 aa21.96■■□□□ 1.11
DDX39A-212ENST00000590260 CD99L2Q8TCZ2 262 aa21.96■■□□□ 1.11
DDX39A-212ENST00000590260 WDR18Q9BV38 432 aa21.96■■□□□ 1.11
DDX39A-212ENST00000590260 ZFYVE28Q9HCC9 887 aa21.96■■□□□ 1.11
DDX39A-212ENST00000590260 ATP8A2Q9NTI2 1148 aa21.96■■□□□ 1.11
DDX39A-212ENST00000590260 SLC4A4Q9Y6R1 1079 aa21.96■■□□□ 1.11
DDX39A-212ENST00000590260 POLR3DP05423 398 aaPredicted RBP21.95■■□□□ 1.1
DDX39A-212ENST00000590260 ZMYM1Q5SVZ6 1142 aa21.95■■□□□ 1.1
DDX39A-212ENST00000590260 C17orf99Q6UX52 265 aa21.95■■□□□ 1.1
DDX39A-212ENST00000590260 GADL1Q6ZQY3 521 aa21.95■■□□□ 1.1
DDX39A-212ENST00000590260 EPB41L4AQ9HCS5 686 aaPredicted RBP21.95■■□□□ 1.1
DDX39A-212ENST00000590260 USP17L12C9JPN9 530 aa21.94■■□□□ 1.1
DDX39A-212ENST00000590260 USP17L21D6R901 530 aa21.94■■□□□ 1.1
DDX39A-212ENST00000590260 CAPN15O75808 1086 aa21.94■■□□□ 1.1
DDX39A-212ENST00000590260 GH2P01242 217 aa21.94■■□□□ 1.1
DDX39A-212ENST00000590260 ASNSP08243 561 aa21.94■■□□□ 1.1
DDX39A-212ENST00000590260 CYP2C8P10632 490 aa21.94■■□□□ 1.1
DDX39A-212ENST00000590260 CTGFP29279 349 aa21.94■■□□□ 1.1
DDX39A-212ENST00000590260 SP3Q02447 781 aa21.94■■□□□ 1.1
DDX39A-212ENST00000590260 SH3D19Q5HYK7 790 aa21.94■■□□□ 1.1
DDX39A-212ENST00000590260 C12orf60Q5U649 245 aa21.94■■□□□ 1.1
DDX39A-212ENST00000590260 CTR9Q6PD62 1173 aa21.94■■□□□ 1.1
DDX39A-212ENST00000590260 FSD1Q9BTV5 496 aa21.94■■□□□ 1.1
DDX39A-212ENST00000590260 TRIM34Q9BYJ4 488 aa21.94■■□□□ 1.1
DDX39A-212ENST00000590260 HTTP42858 3142 aa21.93■■□□□ 1.1
DDX39A-212ENST00000590260 FOXP2O15409 715 aa21.93■■□□□ 1.1
DDX39A-212ENST00000590260 GPAA1O43292 621 aa21.93■■□□□ 1.1
DDX39A-212ENST00000590260 ZFYP08048 801 aaPredicted RBP21.93■■□□□ 1.1
DDX39A-212ENST00000590260 PDE4AP27815 886 aa21.93■■□□□ 1.1
DDX39A-212ENST00000590260 HMGCS2P54868 508 aa21.93■■□□□ 1.1
DDX39A-212ENST00000590260 FASTKD5Q7L8L6 764 aaKnown RBP21.93■■□□□ 1.1
DDX39A-212ENST00000590260 CERKLQ49MI3 558 aaPredicted RBP21.92■■□□□ 1.1
DDX39A-212ENST00000590260 OTOP1Q7RTM1 612 aa21.92■■□□□ 1.1
DDX39A-212ENST00000590260 TBC1D2Q9BYX2 928 aa21.92■■□□□ 1.1
DDX39A-212ENST00000590260 ARHGAP39Q9C0H5 1083 aa21.92■■□□□ 1.1
DDX39A-212ENST00000590260 OSBPL3Q9H4L5 887 aa21.92■■□□□ 1.1
DDX39A-212ENST00000590260 GINM1Q9NU53 330 aa21.92■■□□□ 1.1
DDX39A-212ENST00000590260 ZBTB47Q9UFB7 747 aaPredicted RBP21.92■■□□□ 1.1
DDX39A-212ENST00000590260 CPA4Q9UI42 421 aa21.92■■□□□ 1.1
DDX39A-212ENST00000590260 AGTPBP1Q9UPW5 1226 aa21.92■■□□□ 1.1
DDX39A-212ENST00000590260 BACE1P56817 501 aa21.91■■□□□ 1.1
DDX39A-212ENST00000590260 MTMR2Q13614 643 aa21.91■■□□□ 1.1
DDX39A-212ENST00000590260 PROCA1Q8NCQ7 364 aaPredicted RBP21.91■■□□□ 1.1
DDX39A-212ENST00000590260 SLC45A1Q9Y2W3 748 aa21.91■■□□□ 1.1
DDX39A-212ENST00000590260 MYH8P13535 1937 aa21.9■■□□□ 1.1
DDX39A-212ENST00000590260 BCRP11274 1271 aa21.9■■□□□ 1.1
DDX39A-212ENST00000590260 ABCB5Q2M3G0 1257 aa21.9■■□□□ 1.1
DDX39A-212ENST00000590260 CCDC129Q6ZRS4 1044 aa21.9■■□□□ 1.1
DDX39A-212ENST00000590260 EVI5LQ96CN4 794 aa21.9■■□□□ 1.1
DDX39A-212ENST00000590260 AS3MTQ9HBK9 375 aa21.9■■□□□ 1.1
DDX39A-212ENST00000590260 GREB1LQ9C091 1923 aaPredicted RBP21.89■■□□□ 1.09
DDX39A-212ENST00000590260 SBK1Q52WX2 424 aa21.89■■□□□ 1.09
DDX39A-212ENST00000590260 C16orf86Q6ZW13 317 aa21.89■■□□□ 1.09
DDX39A-212ENST00000590260 ACER1Q8TDN7 264 aa21.89■■□□□ 1.09
DDX39A-212ENST00000590260 ERO1AQ96HE7 468 aa21.89■■□□□ 1.09
DDX39A-212ENST00000590260 EMILIN3Q9NT22 766 aa21.89■■□□□ 1.09
DDX39A-212ENST00000590260 AKR1B1P15121 316 aa21.88■■□□□ 1.09
DDX39A-212ENST00000590260 CDK8P49336 464 aa21.88■■□□□ 1.09
DDX39A-212ENST00000590260 SEPT2Q15019 361 aa21.88■■□□□ 1.09
DDX39A-212ENST00000590260 SIAH1Q8IUQ4 282 aa21.88■■□□□ 1.09
DDX39A-212ENST00000590260 PARK7Q99497 189 aaKnown RBP21.88■■□□□ 1.09
DDX39A-212ENST00000590260 HPS5Q9UPZ3 1129 aa21.88■■□□□ 1.09
DDX39A-212ENST00000590260 TRIM17Q9Y577 477 aa21.88■■□□□ 1.09
DDX39A-212ENST00000590260 ROBO3Q96MS0 1386 aa21.87■■□□□ 1.09
DDX39A-212ENST00000590260 A0A1W2PRG0 241 aa21.87■■□□□ 1.09
DDX39A-212ENST00000590260 USP17L10C9JJH3 530 aa21.87■■□□□ 1.09
DDX39A-212ENST00000590260 LACTBP83111 547 aaPredicted RBP21.87■■□□□ 1.09
DDX39A-212ENST00000590260 RAB3GAP1Q15042 981 aa21.87■■□□□ 1.09
DDX39A-212ENST00000590260 GIMAP6Q6P9H5 292 aa21.87■■□□□ 1.09
DDX39A-212ENST00000590260 POTEEQ6S8J3 1075 aa21.87■■□□□ 1.09
DDX39A-212ENST00000590260 CLEC10AQ8IUN9 316 aa21.87■■□□□ 1.09
DDX39A-212ENST00000590260 FAM227BQ96M60 508 aa21.87■■□□□ 1.09
DDX39A-212ENST00000590260 SWAP70Q9UH65 585 aa21.87■■□□□ 1.09
DDX39A-212ENST00000590260 A0A0D9SFI3 127 aa21.86■■□□□ 1.09
DDX39A-212ENST00000590260 PATL2C9JE40 543 aaKnown RBP21.86■■□□□ 1.09
DDX39A-212ENST00000590260 VPS53Q5VIR6 699 aa21.86■■□□□ 1.09
DDX39A-212ENST00000590260 FBXO46Q6PJ61 603 aaPredicted RBP21.86■■□□□ 1.09
DDX39A-212ENST00000590260 IFNL3Q8IZI9 196 aa21.86■■□□□ 1.09
DDX39A-212ENST00000590260 ARPP21Q9UBL0 812 aaPredicted RBP21.86■■□□□ 1.09
DDX39A-212ENST00000590260 MGAMO43451 1857 aa21.86■■□□□ 1.09
DDX39A-212ENST00000590260 ECM2O94769 699 aaPredicted RBP21.85■■□□□ 1.09
DDX39A-212ENST00000590260 PKN2Q16513 984 aaKnown RBP21.85■■□□□ 1.09
DDX39A-212ENST00000590260 C12orf42Q96LP6 360 aa21.85■■□□□ 1.09
DDX39A-212ENST00000590260 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.85■■□□□ 1.09
DDX39A-212ENST00000590260 ASCC2Q9H1I8 757 aaPredicted RBP21.85■■□□□ 1.09
DDX39A-212ENST00000590260 EFCC1Q9HA90 598 aa21.85■■□□□ 1.09
DDX39A-212ENST00000590260 PTPN22Q9Y2R2 807 aa21.85■■□□□ 1.09
DDX39A-212ENST00000590260 C19orf81C9J6K1 198 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms