RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 LEMD3Q9Y2U8 911 aa14.25□□□□□ -0.13
SMARCA4-208ENST00000585799 TCRBV5S4A2TA0A5A2 114 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 ALX1Q15699 326 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 TXNRD1Q16881 649 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 UBA5Q9GZZ9 404 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 KIAA1468Q9P260 1216 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 ARPP21Q9UBL0 812 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 PCDHB6Q9Y5E3 794 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 SCN11AQ9UI33 1791 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 FMNL1O95466 1100 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 MMP10P09238 476 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 EVX2Q03828 476 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 SLC39A14Q15043 492 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 DPCR1Q3MIW9 517 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 NKX2-3Q8TAU0 364 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 EYA3Q99504 573 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 TMX1Q9H3N1 280 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 SERTAD1Q9UHV2 236 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 MAPK8IP1Q9UQF2 711 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 C5P01031 1676 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 AFDNP55196 1824 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 FOXP2O15409 715 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 SFPQP23246 707 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 ATP2B4P23634 1241 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 UBA7P41226 1012 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 ZNF75DP51815 510 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 TRMT44Q8IYL2 757 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 ATP8A2Q9NTI2 1148 aa14.24□□□□□ -0.13
SMARCA4-208ENST00000585799 CD209Q9NNX6 404 aa14.23□□□□□ -0.13
SMARCA4-208ENST00000585799 RBM28Q9NW13 759 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-208ENST00000585799 FAM205CA6NFA0 338 aa14.23□□□□□ -0.13
SMARCA4-208ENST00000585799 CDC25AP30304 524 aa14.23□□□□□ -0.13
SMARCA4-208ENST00000585799 RC3H1Q5TC82 1133 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-208ENST00000585799 LRRC47Q8N1G4 583 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-208ENST00000585799 NBPF3Q9H094 633 aa14.23□□□□□ -0.13
SMARCA4-208ENST00000585799 CNTNAP4Q9C0A0 1308 aa14.23□□□□□ -0.13
SMARCA4-208ENST00000585799 CACNB3P54284 484 aa14.23□□□□□ -0.13
SMARCA4-208ENST00000585799 UBASH3AP57075 661 aa14.23□□□□□ -0.13
SMARCA4-208ENST00000585799 TTC38Q5R3I4 469 aa14.23□□□□□ -0.13
SMARCA4-208ENST00000585799 ANKRD20A12PQ8NF67 263 aa14.23□□□□□ -0.13
SMARCA4-208ENST00000585799 IL17RAQ96F46 866 aa14.23□□□□□ -0.13
SMARCA4-208ENST00000585799 HLA-DOAP06340 250 aa14.22□□□□□ -0.13
SMARCA4-208ENST00000585799 LETM2Q2VYF4 491 aa14.22□□□□□ -0.13
SMARCA4-208ENST00000585799 JAKMIP3Q5VZ66 844 aa14.22□□□□□ -0.13
SMARCA4-208ENST00000585799 CCDC47Q96A33 483 aaKnown RBP14.22□□□□□ -0.13
SMARCA4-208ENST00000585799 USP40Q9NVE5 1235 aa14.22□□□□□ -0.13
SMARCA4-208ENST00000585799 POLR3EQ9NVU0 708 aa14.22□□□□□ -0.13
SMARCA4-208ENST00000585799 FRMPD2Q68DX3 1309 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-208ENST00000585799 SEMA3EO15041 775 aa14.22□□□□□ -0.13
SMARCA4-208ENST00000585799 CUTAO60888 179 aa14.22□□□□□ -0.13
SMARCA4-208ENST00000585799 FBXO33Q7Z6M2 555 aa14.22□□□□□ -0.13
SMARCA4-208ENST00000585799 AMIGO3Q86WK7 504 aa14.22□□□□□ -0.13
SMARCA4-208ENST00000585799 MXD3Q9BW11 206 aa14.22□□□□□ -0.13
SMARCA4-208ENST00000585799 PPEF1O14829 653 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-208ENST00000585799 COBLO75128 1261 aa14.22□□□□□ -0.13
SMARCA4-208ENST00000585799 SKILP12757 684 aa14.22□□□□□ -0.13
SMARCA4-208ENST00000585799 MMP1P03956 469 aa14.21□□□□□ -0.13
SMARCA4-208ENST00000585799 TOP1P11387 765 aaKnown RBP14.21□□□□□ -0.13
SMARCA4-208ENST00000585799 PLCG2P16885 1265 aa14.21□□□□□ -0.13
SMARCA4-208ENST00000585799 CMA1P23946 247 aa14.21□□□□□ -0.13
SMARCA4-208ENST00000585799 HS1BP3Q53T59 392 aa14.21□□□□□ -0.13
SMARCA4-208ENST00000585799 LRRC4BQ9NT99 713 aa14.21□□□□□ -0.13
SMARCA4-208ENST00000585799 WDHD1O75717 1129 aaPredicted RBP14.21□□□□□ -0.13
SMARCA4-208ENST00000585799 CAVIN2O95810 425 aa14.21□□□□□ -0.13
SMARCA4-208ENST00000585799 TPM1P09493 284 aa14.21□□□□□ -0.13
SMARCA4-208ENST00000585799 PARP1P09874 1014 aaKnown RBP14.21□□□□□ -0.13
SMARCA4-208ENST00000585799 DACH1Q9UI36 760 aa14.21□□□□□ -0.13
SMARCA4-208ENST00000585799 PNPLA7Q6ZV29 1317 aa14.21□□□□□ -0.13
SMARCA4-208ENST00000585799 GNAQP50148 359 aa14.21□□□□□ -0.14
SMARCA4-208ENST00000585799 TICAM2Q86XR7 235 aa14.21□□□□□ -0.14
SMARCA4-208ENST00000585799 TNNT1P13805 278 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 SGMS1Q86VZ5 419 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 BLZF1Q9H2G9 400 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 PYCARDQ9ULZ3 195 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 PCDHA5Q9Y5H7 936 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 PLEKHG2Q9H7P9 1386 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 TNNI2P48788 182 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 USP17L2Q6R6M4 530 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 C2CD5Q86YS7 1000 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 TSC1Q92574 1164 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 BRIP1Q9BX63 1249 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 FAM196BA6NMK8 535 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 BBOX1O75936 387 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 CASP1P29466 404 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 AGXT2Q9BYV1 514 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 TMOD2Q9NZR1 351 aa14.2□□□□□ -0.14
SMARCA4-208ENST00000585799 KLRF2D3W0D1 207 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 OFD1O75665 1012 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 SCG2P13521 617 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 IDEP14735 1019 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 LONRF3Q496Y0 759 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 FILIP1LQ4L180 1135 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 RBM26Q5T8P6 1007 aaKnown RBP14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 RRAGBQ5VZM2 374 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 TRMT1LQ7Z2T5 733 aaKnown RBP14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 NLGN1Q8N2Q7 840 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 CSRNP2Q9H175 543 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 VEZTQ9HBM0 779 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 H0YIN7 160 aa14.19□□□□□ -0.14
SMARCA4-208ENST00000585799 RIOK1Q9BRS2 568 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms