RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 INPP5BP32019 993 aa12.95□□□□□ -0.34
TOP3A-216ENST00000583804 MAP3K9P80192 1104 aa12.95□□□□□ -0.34
TOP3A-216ENST00000583804 COL9A3Q14050 684 aaPredicted RBP12.95□□□□□ -0.34
TOP3A-216ENST00000583804 ADCK5Q3MIX3 580 aa12.95□□□□□ -0.34
TOP3A-216ENST00000583804 TATDN1Q6P1N9 297 aa12.95□□□□□ -0.34
TOP3A-216ENST00000583804 KLRG1Q96E93 195 aa12.95□□□□□ -0.34
TOP3A-216ENST00000583804 JAKMIP1Q96N16 626 aaKnown RBP12.95□□□□□ -0.34
TOP3A-216ENST00000583804 TAOK2Q9UL54 1235 aa12.95□□□□□ -0.34
TOP3A-216ENST00000583804 TACC3Q9Y6A5 838 aa12.95□□□□□ -0.34
TOP3A-216ENST00000583804 PCP11498 1178 aaKnown RBP12.94□□□□□ -0.34
TOP3A-216ENST00000583804 AKR1B1P15121 316 aa12.94□□□□□ -0.34
TOP3A-216ENST00000583804 FKBP1BP68106 108 aa12.94□□□□□ -0.34
TOP3A-216ENST00000583804 TFAP4Q01664 338 aa12.94□□□□□ -0.34
TOP3A-216ENST00000583804 RRP1BQ14684 758 aaKnown RBP12.94□□□□□ -0.34
TOP3A-216ENST00000583804 ABCB5Q2M3G0 1257 aa12.94□□□□□ -0.34
TOP3A-216ENST00000583804 FAM47AQ5JRC9 791 aa12.94□□□□□ -0.34
TOP3A-216ENST00000583804 STOX1Q6ZVD7 989 aa12.94□□□□□ -0.34
TOP3A-216ENST00000583804 RALYLQ86SE5 291 aaKnown RBP12.94□□□□□ -0.34
TOP3A-216ENST00000583804 ZKSCAN4Q969J2 545 aaPredicted RBP12.94□□□□□ -0.34
TOP3A-216ENST00000583804 TCEANC2Q96MN5 208 aa12.94□□□□□ -0.34
TOP3A-216ENST00000583804 KRT23Q9C075 422 aa12.94□□□□□ -0.34
TOP3A-216ENST00000583804 CABP5Q9NP86 173 aa12.94□□□□□ -0.34
TOP3A-216ENST00000583804 ZNF112Q9UJU3 913 aa12.94□□□□□ -0.34
TOP3A-216ENST00000583804 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.94□□□□□ -0.34
TOP3A-216ENST00000583804 NEDD4P46934 1319 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 TSPY2A6NKD2 308 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 B4E1Z4 1266 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 ORC4O43929 436 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 CTNND1O60716 968 aaKnown RBP12.93□□□□□ -0.34
TOP3A-216ENST00000583804 FGRP09769 529 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 TSPY3P0CV98 308 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 TSPY8P0CW00 308 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 RASA1P20936 1047 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 CAP2P40123 477 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 KRT32Q14532 448 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 ANKRD13AQ8IZ07 590 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.93□□□□□ -0.34
TOP3A-216ENST00000583804 ESR2Q92731 530 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 KCNB2Q92953 911 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 CCDC17Q96LX7 622 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 CNNM2Q9H8M5 875 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 PICK1Q9NRD5 415 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 ABT1Q9ULW3 272 aaKnown RBP12.93□□□□□ -0.34
TOP3A-216ENST00000583804 CSADQ9Y600 493 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 SIPA1L1O43166 1804 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 LAMB1P07942 1786 aa12.93□□□□□ -0.34
TOP3A-216ENST00000583804 TMEM88BA6NKF7 163 aa12.92□□□□□ -0.34
TOP3A-216ENST00000583804 KDM4AO75164 1064 aa12.92□□□□□ -0.34
TOP3A-216ENST00000583804 GH2P01242 217 aa12.92□□□□□ -0.34
TOP3A-216ENST00000583804 CASTP20810 708 aaKnown RBP12.92□□□□□ -0.34
TOP3A-216ENST00000583804 SLC4A3P48751 1232 aa12.92□□□□□ -0.34
TOP3A-216ENST00000583804 RAB3GAP1Q15042 981 aa12.92□□□□□ -0.34
TOP3A-216ENST00000583804 MAP3K11Q16584 847 aa12.92□□□□□ -0.34
TOP3A-216ENST00000583804 SHROOM1Q2M3G4 852 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-216ENST00000583804 TSGA10IPQ3SY00 556 aa12.92□□□□□ -0.34
TOP3A-216ENST00000583804 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-216ENST00000583804 NCOA7Q8NI08 942 aa12.92□□□□□ -0.34
TOP3A-216ENST00000583804 CLMNQ96JQ2 1002 aa12.92□□□□□ -0.34
TOP3A-216ENST00000583804 LARP6Q9BRS8 491 aaKnown RBP12.92□□□□□ -0.34
TOP3A-216ENST00000583804 LAMA4Q16363 1823 aa12.92□□□□□ -0.34
TOP3A-216ENST00000583804 CD2BP2O95400 341 aaKnown RBP12.91□□□□□ -0.34
TOP3A-216ENST00000583804 HUNKP57058 714 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 JAG1P78504 1218 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 VGLL4Q14135 290 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 LDLRAD1Q5T700 205 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 CHST3Q7LGC8 479 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 SCYL3Q8IZE3 742 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 NKX2-3Q8TAU0 364 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 SLC10A4Q96EP9 437 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 NEK1Q96PY6 1258 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 ELP3Q9H9T3 547 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 RNF216Q9NWF9 866 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-216ENST00000583804 ZSWIM5Q9P217 1185 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 ZBTB21Q9ULJ3 1066 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 ASNSP08243 561 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 PSMA5P28066 241 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 NEK4P51957 841 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 ATP2B2Q01814 1243 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 SEPT2Q15019 361 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 TMEM179Q6ZVK1 233 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 CCDC84Q86UT8 332 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-216ENST00000583804 NEDD1Q8NHV4 660 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 ZKSCAN3Q9BRR0 538 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 LRRC2Q9BYS8 371 aa12.91□□□□□ -0.34
TOP3A-216ENST00000583804 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-216ENST00000583804 APLP1P51693 650 aa12.9□□□□□ -0.34
TOP3A-216ENST00000583804 ANAPC15P60006 121 aa12.9□□□□□ -0.34
TOP3A-216ENST00000583804 RABEP1Q15276 862 aa12.9□□□□□ -0.34
TOP3A-216ENST00000583804 NOL9Q5SY16 702 aaKnown RBP12.9□□□□□ -0.34
TOP3A-216ENST00000583804 BLOC1S2Q6QNY1 142 aa12.9□□□□□ -0.34
TOP3A-216ENST00000583804 CYB5R4Q7L1T6 521 aa12.9□□□□□ -0.34
TOP3A-216ENST00000583804 SAPCD2Q86UD0 394 aa12.9□□□□□ -0.34
TOP3A-216ENST00000583804 IQCA1Q86XH1 822 aa12.9□□□□□ -0.34
TOP3A-216ENST00000583804 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.9□□□□□ -0.34
TOP3A-216ENST00000583804 GINM1Q9NU53 330 aa12.9□□□□□ -0.34
TOP3A-216ENST00000583804 SNCAIPQ9Y6H5 919 aa12.9□□□□□ -0.34
TOP3A-216ENST00000583804 PAPPA2Q9BXP8 1791 aa12.9□□□□□ -0.34
TOP3A-216ENST00000583804 UNCXA6NJT0 531 aa12.89□□□□□ -0.35
TOP3A-216ENST00000583804 USP17L5A8MUK1 530 aa12.89□□□□□ -0.35
TOP3A-216ENST00000583804 NMT2O60551 498 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms